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- Andersson, Thord, 1972-, et al.
(författare)
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Geodesic registration for interactive atlas-based segmentation using learned multi-scale anatomical manifolds
- 2018
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Ingår i: Pattern Recognition Letters. - : Elsevier. - 0167-8655 .- 1872-7344. ; 112, s. 340-345
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Tidskriftsartikel (refereegranskat)abstract
- Atlas-based segmentation is often used to segment medical image regions. For intensity-normalized data, the quality of these segmentations is highly dependent on the similarity between the atlas and the target under the used registration method. We propose a geodesic registration method for interactive atlas-based segmentation using empirical multi-scale anatomical manifolds. The method utilizes unlabeled images together with the labeled atlases to learn empirical anatomical manifolds. These manifolds are defined on distinct scales and regions and are used to propagate the labeling information from the atlases to the target along anatomical geodesics. The resulting competing segmentations from the different manifolds are then ranked according to an image-based similarity measure. We used image volumes acquired using magnetic resonance imaging from 36 subjects. The performance of the method was evaluated using a liver segmentation task. The result was then compared to the corresponding performance of direct segmentation using Dice Index statistics. The method shows a significant improvement in liver segmentation performance between the proposed method and direct segmentation. Furthermore, the standard deviation in performance decreased significantly. Using competing complementary manifolds defined over a hierarchy of region of interests gives an additional improvement in segmentation performance compared to the single manifold segmentation.
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| 2. |
- Borga, Magnus, et al.
(författare)
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Semi-Supervised Learning of Anatomical Manifolds for Atlas-Based Segmentation of Medical Images
- 2016
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Ingår i: Proceedings of the 23rd International Conference on Pattern Recognition (ICPR). - : IEEE Computer Society. - 9781509048472 - 9781509048489 ; , s. 3146-3149
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Konferensbidrag (refereegranskat)abstract
- This paper presents a novel method for atlas-based segmentation of medical images. The method uses semi- supervised learning of a graph describing a manifold of anatom- ical variations of whole-body images, where unlabelled data are used to find a path with small deformations from the labelled atlas to the target image. The method is evaluated on 36 whole-body magnetic resonance images with manually segmented livers as ground truth. Significant improvement (p < 0.001) was obtained compared to direct atlas-based registration.
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