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Search: WFRF:(James P) > Journal article > Oostra Ben A > Tanaka Toshiko

  • Result 11-12 of 12
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11.
  • Parsa, Afshin, et al. (author)
  • Common Variants in Mendelian Kidney Disease Genes and Their Association with Renal Function
  • 2013
  • In: Journal of the American Society of Nephrology. - 1046-6673 .- 1533-3450. ; 24:12, s. 2105-2117
  • Journal article (peer-reviewed)abstract
    • Many common genetic variants identified by genome-wide association studies for complex traits map to genes previously linked to rare inherited Mendelian disorders. A systematic analysis of common single-nucleotide polymorphisms (SNPs) in genes responsible for Mendelian diseases with kidney phenotypes has not been performed. We thus developed a comprehensive database of genes for Mendelian kidney conditions and evaluated the association between common genetic variants within these genes and kidney function in the general population. Using the Online Mendelian Inheritance in Man database, we identified 731 unique disease entries related to specific renal search terms and confirmed a kidney phenotype in 218 of these entries, corresponding to mutations in 258 genes. We interrogated common SNPs (minor allele frequency >5%) within these genes for association with the estimated GFR in 74,354 European-ancestry participants from the CKDGen Consortium. However, the top four candidate SNPs (rs6433115 at LRP2, rs1050700 at TSC1, rs249942 at PALB2, and rs9827843 at ROBO2) did not achieve significance in a stage 2 meta-analysis performed in 56,246 additional independent individuals, indicating that these common SNPs are not associated with estimated GFR. The effect of less common or rare variants in these genes on kidney function in the general population and disease-specific cohorts requires further research.
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12.
  • Pattaro, Cristian, et al. (author)
  • Genome-Wide Association and Functional Follow-Up Reveals New Loci for Kidney Function
  • 2012
  • In: PLoS Genetics. - : Public Library of Science (PLoS). - 1553-7390 .- 1553-7404. ; 8:3, s. e1002584-
  • Journal article (peer-reviewed)abstract
    • Chronic kidney disease (CKD) is an important public health problem with a genetic component. We performed genomewide association studies in up to 130,600 European ancestry participants overall, and stratified for key CKD risk factors. We uncovered 6 new loci in association with estimated glomerular filtration rate (eGFR), the primary clinical measure of CKD, in or near MPPED2, DDX1, SLC47A1, CDK12, CASP9, and INO80. Morpholino knockdown of mpped2 and casp9 in zebrafish embryos revealed podocyte and tubular abnormalities with altered dextran clearance, suggesting a role for these genes in renal function. By providing new insights into genes that regulate renal function, these results could further our understanding of the pathogenesis of CKD.
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  • Result 11-12 of 12
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journal article  (12)Undo refine
Type of content
peer-reviewed (12)
Author/Editor
Oostra, Ben A. (12)
Tanaka, Toshiko (12)Undo refine
Ferrucci, Luigi (12)
Campbell, Harry (11)
Rudan, Igor (11)
van Duijn, Cornelia ... (11)
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Pramstaller, Peter P ... (11)
Wilson, James F. (11)
Hofman, Albert (11)
Uitterlinden, André ... (11)
Hayward, Caroline (11)
Shuldiner, Alan R. (10)
Wright, Alan F. (10)
Kovacs, Peter (10)
Rivadeneira, Fernand ... (10)
Harris, Tamara B (10)
Liu, Yongmei (10)
Gudnason, Vilmundur (10)
Isaacs, Aaron (10)
Prokopenko, Inga (10)
Stumvoll, Michael (10)
Wichmann, H. Erich (9)
Illig, Thomas (9)
Heid, Iris M (9)
Vollenweider, Peter (9)
Chasman, Daniel I. (8)
Gieger, Christian (8)
Gyllensten, Ulf (8)
Loos, Ruth J F (8)
Vitart, Veronique (8)
Polasek, Ozren (8)
Boerwinkle, Eric (8)
Esko, Tõnu (8)
Teumer, Alexander (8)
Salomaa, Veikko (7)
Perola, Markus (7)
Wareham, Nicholas J. (7)
Johansson, Åsa (7)
Ridker, Paul M. (7)
Demirkan, Ayse (7)
Langenberg, Claudia (7)
Mohlke, Karen L (7)
Metspalu, Andres (7)
Kronenberg, Florian (7)
Koenig, Wolfgang (7)
Wild, Sarah H (7)
Pattaro, Cristian (7)
Smith, Albert V (7)
Dehghan, Abbas (7)
Borecki, Ingrid B. (7)
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University
Uppsala University (12)
Lund University (6)
Umeå University (5)
Karolinska Institutet (5)
University of Gothenburg (4)
Högskolan Dalarna (2)
Language
English (12)
Research subject (UKÄ/SCB)
Medical and Health Sciences (7)
Natural sciences (3)

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