| 1. |
- Aidemark, Mari, et al.
(författare)
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Trichoderma viride cellulase induces resistance to the antibiotic pore-forming peptide alamethicin associated with changes in the plasma membrane lipid composition of tobacco BY-2 cells
- 2010
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Ingår i: Bmc Plant Biology. - : Springer Science and Business Media LLC. - 1471-2229. ; 10
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Tidskriftsartikel (refereegranskat)abstract
- Background: Alamethicin is a membrane-active peptide isolated from the beneficial root-colonising fungus Trichoderma viride. This peptide can insert into membranes to form voltage-dependent pores. We have previously shown that alamethicin efficiently permeabilises the plasma membrane, mitochondria and plastids of cultured plant cells. In the present investigation, tobacco cells (Nicotiana tabacum L. cv Bright Yellow-2) were pre-treated with elicitors of defence responses to study whether this would affect permeabilisation. Results: Oxygen consumption experiments showed that added cellulase, already upon a limited cell wall digestion, induced a cellular resistance to alamethicin permeabilisation. This effect could not be elicited by xylanase or bacterial elicitors such as flg22 or elf18. The induction of alamethicin resistance was independent of novel protein synthesis. Also, the permeabilisation was unaffected by the membrane-depolarising agent FCCP. As judged by lipid analyses, isolated plasma membranes from cellulase-pretreated tobacco cells contained less negatively charged phospholipids ( PS and PI), yet higher ratios of membrane lipid fatty acid to sterol and to protein, as compared to control membranes. Conclusion: We suggest that altered membrane lipid composition as induced by cellulase activity may render the cells resistant to alamethicin. This induced resistance could reflect a natural process where the plant cells alter their sensitivity to membrane pore-forming agents secreted by Trichoderma spp. to attack other microorganisms, and thus adding to the beneficial effect that Trichoderma has for plant root growth. Furthermore, our data extends previous reports on artificial membranes on the importance of lipid packing and charge for alamethicin permeabilisation to in vivo conditions.
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| 2. |
- Alström, Per, et al.
(författare)
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Description of a new species of Phylloscopus from Vietnam and Laos.
- 2010
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Ingår i: Ibis. - 0019-1019 .- 1474-919X. ; 152:1, s. 145-168
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Tidskriftsartikel (refereegranskat)abstract
- A new species of Phylloscopus warbler, which we name Phylloscopus calciatilis Limestone Leaf Warbler, is described from central and northern Vietnam and central and northern Laos; it probably also breeds in southernmost China. In morphology, the new species is very similar to Sulphur-breasted Warbler Phylloscopus ricketti, but it is smaller with a proportionately larger bill and rounder wing. Its song and calls are diagnostic. Based on mitochondrial and nuclear DNA, the new species is most closely related to P. ricketti and Yellow-vented Warbler Phylloscopus cantator, and it is inferred to be sister to the latter. The mitochondrial divergences between these three species are at the low end of the variation found in other species of Phylloscopus and Seicercus warblers, but greater than in other taxa generally treated as subspecies. Possible introgressive hybridization between the new species and P. ricketti is discussed, but more data are needed to establish whether it does occur and, if it does, to what extent. The new species appears to have a restricted breeding range in limestone karst environments, where it is locally common and therefore not under any immediate threat. In view of the recognition of the new species, all previous records of P. ricketti sensu lato need to be re-evaluated.
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| 3. |
- Berglund, Örjan, et al.
(författare)
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A lysimeter study on the effect of temperature on CO2 emission from cultivated peat soils
- 2010
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Ingår i: Geoderma. - : Elsevier BV. - 0016-7061 .- 1872-6259. ; 154:3-4, s. 211-218
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Tidskriftsartikel (refereegranskat)abstract
- A lysimeter method was evaluated for its suitability in gas emission studies by studying the effect of temperature on CO2 emissions (dark respiration) from cultivated peat soils. The study was carried out with organic soils from two locations in Sweden, a typical cultivated fen peat with low pH and high organic matter content (Örke) and a more uncommon fen peat with high pH and low organic matter content (Majnegården). A drilling method with minimal soil disturbance was used to collect 12 undisturbed soil lysimeters per site. CO2 emission was measured weekly from the vegetated lysimeters and the results were compared with data from incubation experiments. The CO2 emissions measured in the lysimeter experiment were in the same range as those in other studies and showed a similar increase with temperature as in the incubation experiment. With climatic and drainage conditions being similar in the lysimeter experiment, differences in daytime CO2 emission rates between soils (483 mg ± 6.9 CO2 m− 2 h− 1 from the Örke soil and 360 ± 7.5 mg CO2 m− 2 h− 1 from the Majnegården soil) were presumably due to soil quality differences. Q10 values of 2.1 and 3.0 were determined in the lysimeter experiment and of 1.9 to 4.5 in the incubation experiment for Örke and Majnegården respectively. CO2 emission data fitted well to a semi-empirical equation relating CO2 emissions to air temperature. The lysimeter method proved to be well suited for CO2 emission studies.
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| 4. |
- Björk, Robert G., 1974, et al.
(författare)
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Contrasting effects of wood ash application on microbial community structure, biomass and processes in drained forested peatlands
- 2010
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Ingår i: FEMS Microbiology Ecology. - : Oxford University Press (OUP). - 1574-6941 .- 0168-6496. ; 73:3, s. 550-562
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Tidskriftsartikel (refereegranskat)abstract
- The effects of wood ash application on soil microbial processes were investigated in three drained forested peatlands, which differed in nutrient status and time since application. Measured variables included concentrations of soil elements and phospholipid fatty acids (PLFAs), net nitrogen mineralisation, nitrification and denitrification enzyme activity, potential methane oxidation, methane production and microbial respiration kinetics. Wood ash application had a considerable influence on soil element concentrations. This mirrored a decrease in the majority of the microbial biomarkers by more than one-third in the two oligotrophic peatlands, although microbial community composition was not altered. The decreases in PLFAs coincided with reduced net ammonification and net nitrogen mineralisation. Other measured variables did not change systematically as a result of wood ash application. No significant changes in microbial biomass or processes were found in the mesotrophic peatland, possibly because too little time (1 year) had elapsed since the wood ash application. This study suggests that oligotrophic peatlands can be substantially affected by wood ash for a period of at least four years after application. However, within 25 years of the wood ash application, the microbial biomass seemed to have recovered or adapted to enhanced element concentrations in the soil.
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| 5. |
- Bolmgren, Kjell, et al.
(författare)
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Vårtecken i samhällets tjänst.
- 2010
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Ingår i: Svensk Botanisk Tidskrift. ; 104, s. 45-51
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Tidskriftsartikel (övrigt vetenskapligt/konstnärligt)
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| 6. |
- Ernfors, Maria, 1973, et al.
(författare)
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Effects of wood ash fertilization on forest floor greenhouse gas emissions and tree growth in nutrient poor drained peatland forests
- 2010
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Ingår i: SCIENCE OF THE TOTAL ENVIRONMENT. - : Elsevier BV. - 0048-9697 .- 1879-1026. ; 408:20, s. 4580-4590
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Tidskriftsartikel (refereegranskat)abstract
- Wood ash (3.1, 3.3 or 6.6 tonnes dry weight ha(-1)) was used to fertilize two drained and forested peatland sites in southern Sweden. The sites were chosen to represent the Swedish peatlands that are most suitable for ash fertilization, with respect to stand growth response. The fluxes of carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) from the forest floor, measured using opaque static chambers, were monitored at both sites during 2004 and 2005 and at one of the sites during the period 1 October 2007-1 October 2008. No significant (p>0.05) changes in forest floor greenhouse gas exchange were detected. The annual emissions of CO2 from the sites varied between 6.4 and 15.4 tonnes ha(-1), while the CH4 fluxes varied between 1.9 and 12.5 kg ha(-1). The emissions of N2O were negligible. Ash fertilization increased soil pH at a depth of 0-0.05 m by up to 0.9 units (p<0.01) at one site, 5 years after application, and by 0.4 units (p<0.05) at the other site, 4 years after application. Over the first 5 years after fertilization, the mean annual tree stand basal area increment was significantly larger (p<0.05) at the highest ash dose plots compared with control plots (0.64 m(2) ha(-1) year(-1) and 0.52 m(2) ha(-1) year(-1), respectively). The stand biomass, which was calculated using tree biomass functions, was not significantly affected by the ash treatment. The groundwater levels during the 2008 growing season were lower in the high ash dose plots than in the corresponding control plots (p<0.05), indicating increased evapotranspiration as a result of increased tree growth. The larger basal area increment and the lowered groundwater levels in the high ash dose plots suggest that fertilization promoted tree growth, while not affecting greenhouse gas emissions.
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| 7. |
- Linderholm, Hans W., 1968, et al.
(författare)
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Dendroclimatology in Fennoscandia – from past accomplishments to future potential
- 2010
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Ingår i: Climate of the Past. - : Copernicus GmbH. - 1814-9324 .- 1814-9332. ; 6, s. 93-114.
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Tidskriftsartikel (refereegranskat)abstract
- Fennoscandia has a strong tradition in dendrochronology, and its large tracts of boreal forest make the region well suited for the development of tree-ring chronologies that extend back several thousands of years. Two of the world’s longest continuous (most tree-ring chronologies are annually resolved) tree-ring width chronologies are found in northern Fennoscandia, with records from Tornetr¨ask and Finnish Lapland covering the last ca. 7500 yr. In addition, several chronologies between coastal Norway and the interior of Finland extend back several centuries. Tree-ring data from Fennoscandia have provided important information on regional climate variability during the mid to late Holocene and have played major roles in the reconstruction of hemispheric and global temperatures. Tree-ring data from the region have also been used to reconstruct large-scale atmospheric circulation patterns, regional precipitation and drought. Such information is imperative when trying to reach better understanding of natural climate change and variability and its forcing mechanisms, and placing recent climate change within a long-term context.
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| 8. |
- Luheshi, Leila M., et al.
(författare)
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Sequestration of the A beta Peptide Prevents Toxicity and Promotes Degradation In Vivo
- 2010
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Ingår i: PLoS biology. - : Public Library of Science (PLoS). - 1544-9173 .- 1545-7885. ; 8:3, s. e1000334-
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Tidskriftsartikel (refereegranskat)abstract
- Protein aggregation, arising from the failure of the cell to regulate the synthesis or degradation of aggregation-prone proteins, underlies many neurodegenerative disorders. However, the balance between the synthesis, clearance, and assembly of misfolded proteins into neurotoxic aggregates remains poorly understood. Here we study the effects of modulating this balance for the amyloid-beta (A beta) peptide by using a small engineered binding protein (Z(A beta 3)) that binds with nanomolar affinity to A beta, completely sequestering the aggregation-prone regions of the peptide and preventing its aggregation. Co-expression of Z(A beta 3) in the brains of Drosophila melanogaster expressing either A beta(42) or the aggressive familial Alzheimer's disease (AD) associated E22G variant of A beta(42) abolishes their neurotoxic effects. Biochemical analysis indicates that monomer A beta binding results in degradation of the peptide in vivo. Complementary biophysical studies emphasize the dynamic nature of A beta aggregation and reveal that Z(A beta 3) not only inhibits the initial association of A beta monomers into oligomers or fibrils, but also dissociates pre-formed oligomeric aggregates and, although very slowly, amyloid fibrils. Toxic effects of peptide aggregation in vivo can therefore be eliminated by sequestration of hydrophobic regions in monomeric peptides, even when these are extremely aggregation prone. Our studies also underline how a combination of in vivo and in vitro experiments provide mechanistic insight with regard to the relationship between protein aggregation and clearance and show that engineered binding proteins may provide powerful tools with which to address the physiological and pathological consequences of protein aggregation.
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| 9. |
- Olsson, Urban, 1954, et al.
(författare)
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The Lanius excubitor (Aves, Passeriformes) conundrum – Taxonomic dilemma when molecular and non-molecular data tell different stories.
- 2010
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Ingår i: Molecular Phylogenetics and Evolution. - : Elsevier BV. - 1055-7903 .- 1095-9513. ; 55:2, s. 347-357
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Tidskriftsartikel (refereegranskat)abstract
- The phylogeny of 18 taxa in the Lanius excubitor complex, and the related species L. sphenocercus, L. ludovicianus and L. somalicus, was estimated based on the mitochondrial cytochrome b gene and the non-coding D-loop (in total ∼1.3 kb). According to the mitochondrial gene tree, Lanius excubitor s.l. is non-monophyletic, with some of its subspecies being more closely related to L. sphenocercus, L. ludovicianus, and L. somalicus. Also the division of the L. excubitor complex into a northern (L. excubitor) and a southern (L. meridionalis) species, as has been proposed based on morphological and ecological similarity and geographical distributions, is not compatible with the mitochondrial tree. Overall, genetic divergences among the ingroup taxa are small, indicating a recent radiation. A tree based on the nuclear ornithine decarboxylase (ODC) introns 6–7 is unresolved with respect to the ingroup, but provides strong support for a clade containing the Lanius excubitor complex, L. sphenocercus, L. ludovicianus and L. somalicus. We discuss the incongruence between the current taxonomy and the mitochondrial gene tree, and conclude that based on the latter the Lanius excubitor complex may be treated as at least six species, L. borealis, L. elegans, L. excubitor, L. lahtora, L. meridionalis, and L. uncinatus, but that other taxonomic treatments are also possible. However, uncertainty regarding to which extent the mitochondrial gene tree reflects the species phylogeny prevents us from recommending taxonomic change without further investigation. This study highlights the possible danger of relying on a single molecular marker, such as mitochondrial DNA, in taxonomic revisions and phylogenetic inference
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| 10. |
- Omstedt, Anders, 1949, et al.
(författare)
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Factors influencing the acid–base (pH) balance in the Baltic Sea: a sensitivity analysis
- 2010
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Ingår i: Tellus B. - : Stockholm University Press. - 0280-6509 .- 1600-0889. ; 62:4, s. 280-295
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Tidskriftsartikel (refereegranskat)abstract
- Using calculations based on the marine carbon system and on modelling, the sensitivity of Baltic Sea surface pH was examined. Transient long-term calculations demonstrated that the marine carbon system adjusts to lateral boundary conditions within some decades, as does salinity. Climate changes in temperature or salinity will only marginally affect the acid–base (pH) balance. Wetter or dryer climate will also play a minor role in the pH balance. The direct effect on seawater pH of acid precipitation over the Baltic Sea surface was demonstrated to be small. Acidification due to river transport of dissolved organic carbon (DOC) into the marine system seems marginal although mineralization of terrestrial DOC may cause extra marine acidification, but the effect has yet to be quantified. Increased nutrient load may increase the amplitude in the pH seasonal cycle and increase the acidification during winter time. Fossil fuel burning is likely to have both a direct and indirect effect through increased CO2 levels, altering seawater pH as well as changing the river chemistry. This may severely threaten some species in the Baltic Sea, particularly in the Northern Baltic.
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