| 1. |
- Capek, Petr, et al.
(författare)
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Drivers of phosphorus limitation across soil microbial communities
- 2016
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Ingår i: Functional Ecology. - : Wiley. - 0269-8463 .- 1365-2435. ; 30:10, s. 1705-1713
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Tidskriftsartikel (refereegranskat)abstract
- Nutrient limitation of soil microbial communities controls the rates of plant litter and soil organic matter decomposition and nutrient mineralization, and as such, it is central to soil and ecosystem models. According to ecological stoichiometry theory, when the carbon (C)-to-nutrient (E) ratio of resources used by a microbial community is higher than a critical ratio (C:E-CR), that nutrient is limiting. The C-to-phosphorus (P) critical ratio (C:P-CR) that determines P limitation is largely unknown for soils, and thus, it is the subject of our study. Our results show that the C:P-CR in widely different soils ranges from 266 to 4651 or from 209 to 7407 when accounting for 95% confidence intervals. Using constant or narrowly fluctuating C:P-CR in ecosystem models is therefore inaccurate. The C:P-CR cannot be simply predicted from microbial community C:P or available soil P. C:P-CR was only related to relative abundance of phospholipid fatty acids, which reflects microbial community structure and physiology. Our data suggest complex controls over microbial community C:P-CR. We further propose that using P storage compounds that allow the microbial community to temporarily buffer variability in available P can represent a widely adopted strategies across soils.
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| 2. |
- Santruckova, Hana, et al.
(författare)
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Significance of dark CO2 fixation in arctic soils
- 2018
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Ingår i: Soil Biology and Biochemistry. - : Elsevier BV. - 0038-0717 .- 1879-3428. ; 119, s. 11-21
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Tidskriftsartikel (refereegranskat)abstract
- The occurrence of dark fixation of CO2 by heterotrophic microorganisms in soil is generally accepted, but its importance for microbial metabolism and soil organic carbon (C) sequestration is unknown, especially under C limiting conditions. To fill this knowledge gap, we measured dark (CO2)-C-13 incorporation into soil organic matter and conducted a C-13-labelling experiment to follow the C-13 incorporation into phospholipid fatty acids as microbial biomass markers across soil profiles of four tundra ecosystems in the northern circumpolar region, where net primary productivity and thus soil C inputs are low. We further determined the abundance of various carboxylase genes and identified their microbial origin with metagenomics. The microbial capacity for heterotrophic CO2 fixation was determined by measuring the abundance of carboxylase genes and the incorporation of C-13 into soil C following the augmentation of bioavailable C sources. We demonstrate that dark CO2 fixation occurred ubiquitously in arctic tundra soils, with increasing importance in deeper soil horizons, presumably due to increasing C limitation with soil depth. Dark CO2 fixation accounted on average for 0.4, 1.0, 1.1, and 16% of net respiration in the organic, cryoturbated organic, mineral and permafrost horizons, respectively. Genes encoding anaplerotic enzymes of heterotrophic microorganisms comprised the majority of identified carboxylase genes. The genetic potential for dark CO2 fixation was spread over a broad taxonomic range. The results suggest important regulatory function of CO2 fixation in C limited conditions. The measurements were corroborated by modeling the long-term impact of dark CO2 fixation on soil organic matter. Our results suggest that increasing relative CO2 fixation rates in deeper soil horizons play an important role for soil internal C cycling and can, at least in part, explain the isotopic enrichment with soil depth.
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| 3. |
- Capek, Miloslav, et al.
(författare)
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Optimal Inverse Design Based on Memetic Algorithms - Part 1 : Theory and Implementation
- 2023
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Ingår i: IEEE Transactions on Antennas and Propagation. - 0018-926X. ; 71:11, s. 8806-8816
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Tidskriftsartikel (refereegranskat)abstract
- A memetic framework for optimal inverse design is proposed by combining a local gradient-based procedure and a robust global scheme. The procedure is based on method-of-moments matrices and does not demand full inversion of a system matrix. Fundamental bounds are evaluated for all optimized metrics in the same manner, providing natural stopping criteria and quality measures for realized devices. Compared to density-based topology optimization, the proposed routine does not require filtering or thresholding. Compared to commonly used heuristics, the technique is significantly faster, still preserving a high level of versatility and robustness. This is a two-part paper in which the first part is devoted to the theoretical background and properties, and the second part applies the method to examples of varying complexity.
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| 4. |
- Capek, Miloslav, et al.
(författare)
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Optimal Inverse Design Based on Memetic Algorithms - Part II : Examples and Properties
- 2023
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Ingår i: IEEE Transactions on Antennas and Propagation. - 0018-926X. ; 71:11, s. 8817-8829
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Tidskriftsartikel (refereegranskat)abstract
- Optimal inverse design, including topology optimization and evaluation of fundamental bounds on performance, which was introduced in Part 1, is applied to various antenna design problems. A memetic scheme for topology optimization combines local and global techniques to accelerate convergence and maintain robustness. Method-of-moments (MoMs) matrices are used to evaluate objective functions and allow determination of fundamental bounds on performance. By applying the Shermann-Morrison-Woodbury identity, the repetitively performed structural update is inversion-free yet full-wave. The technique can easily be combined with additional features often required in practice, e.g., only a part of the structure is controllable, or evaluation of an objective function is required in a subdomain only. The memetic framework supports multifrequency and multiport optimization and offers many other advantages, such as an actual shape being known at every moment of the optimization. The performance of the method is assessed, including its convergence and computational cost.
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| 5. |
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| 6. |
- Choma, Michal, et al.
(författare)
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Recovery of the ectomycorrhizal community after termination of long-term nitrogen fertilisation of a boreal Norway spruce forest
- 2017
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Ingår i: Fungal Ecology. - : Elsevier BV. - 1754-5048 .- 1878-0083. ; 29, s. 116-122
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Tidskriftsartikel (refereegranskat)abstract
- © 2016 Elsevier Ltd and British Mycological Society.Ectomycorrhizal fungi (ECM) are a fundamental component of boreal forests promoting tree growth and participating in soil nutrient cycling. Increased nitrogen (N) input is known to largely influence ECM communities but their potential recovery is not well understood. Therefore, we studied the effects of long-term N-fertilisation on ECM communities, and their recovery after termination of N treatment. Fungal ITS sequencing data indicated that N-fertilisation (34 kg N ha-1 y-1) for 46 y decreased the relative abundance of ECM species in the fungal community and suppressed originally dominating medium-distance fringe exploration types adapted to N-limited conditions, while the ECM diversity remained unaffected. In other plots, 23 y after termination of fertilisation at 73 kg N ha-1 y-1 for 23 y, the relative abundance of ECM species shifted closer to, but did not reach, control levels. These observations indicate only slow recovery of ECM community, likely due to a high soil N retention capacity.
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| 7. |
- Dao, Thao Thi, et al.
(författare)
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Lignin Preservation and Microbial Carbohydrate Metabolism in Permafrost Soils
- 2022
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Ingår i: Journal of Geophysical Research - Biogeosciences. - 2169-8953 .- 2169-8961. ; 127:1
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Tidskriftsartikel (refereegranskat)abstract
- Permafrost-affected soils in the northern circumpolar region store more than 1,000 Pg soil organic carbon (OC), and are strongly vulnerable to climatic warming. However, the extent to which changing soil environmental conditions with permafrost thaw affects different compounds of soil organic matter (OM) is poorly understood. Here, we assessed the fate of lignin and non-cellulosic carbohydrates in density fractionated soils (light fraction, LF vs. heavy fraction, HF) from three permafrost regions with decreasing continentality, expanding from east to west of northern Siberia (Cherskiy, Logata, Tazovskiy, respectively). In soils at the Tazovskiy site with thicker active layers, the LF showed smaller OC-normalized contents of lignin-derived phenols and plant-derived sugars and a decrease of these compounds with soil depth, while a constant or even increasing trend was observed in soils with shallower active layers (Cherskiy and Logata). Also in the HF, soils at the Tazovskiy site had smaller contents of OC-normalized lignin-derived phenols and plant-derived sugars along with more pronounced indicators of oxidative lignin decomposition and production of microbial-derived sugars. Active layer deepening, thus, likely favors the decomposition of lignin and plant-derived sugars, that is, lignocelluloses, by increasing water drainage and aeration. Our study suggests that climate-induced degradation of permafrost soils may promote carbon losses from lignin and associated polysaccharides by abolishing context-specific preservation mechanisms. However, relations of OC-based lignin-derived phenols and sugars in the HF with mineralogical properties suggest that future OM transformation and carbon losses will be modulated in addition by reactive soil minerals.
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| 8. |
- Gentsch, Norman, et al.
(författare)
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Temperature response of permafrost soil carbon is attenuated by mineral protection
- 2018
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Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 24:8, s. 3401-3415
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Tidskriftsartikel (refereegranskat)abstract
- Climate change in Arctic ecosystems fosters permafrost thaw and makes massive amounts of ancient soil organic carbon (OC) available to microbial breakdown. However, fractions of the organic matter (OM) may be protected from rapid decomposition by their association with minerals. Little is known about the effects of mineral-organic associations (MOA) on the microbial accessibility of OM in permafrost soils and it is not clear which factors control its temperature sensitivity. In order to investigate if and how permafrost soil OC turnover is affected by mineral controls, the heavy fraction (HF) representing mostly MOA was obtained by density fractionation from 27 permafrost soil profiles of the Siberian Arctic. In parallel laboratory incubations, the unfractionated soils (bulk) and their HF were comparatively incubated for 175 days at 5 and 15 degrees C. The HF was equivalent to 70 +/- 9% of the bulk CO2 respiration as compared to a share of 63 +/- 1% of bulk OC that was stored in the HF. Significant reduction of OC mineralization was found in all treatments with increasing OC content of the HF (HF-OC), clay-size minerals and Fe or Al oxyhydroxides. Temperature sensitivity (Q10) decreased with increasing soil depth from 2.4 to 1.4 in the bulk soil and from 2.9 to 1.5 in the HF. A concurrent increase in the metal-to-HF-OC ratios with soil depth suggests a stronger bonding of OM to minerals in the subsoil. There, the younger C-14 signature in CO2 than that of the OC indicates a preferential decomposition of the more recent OM and the existence of a MOA fraction with limited access of OM to decomposers. These results indicate strong mineral controls on the decomposability of OM after permafrost thaw and on its temperature sensitivity. Thus, we here provide evidence that OM temperature sensitivity can be attenuated by MOA in permafrost soils.
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| 9. |
- Kovářík, Ondřej, et al.
(författare)
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Damping measurement during resonance fatigue test and its application for crack detection in TBC samples
- 2016
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Ingår i: International Journal of Fatigue. - : Elsevier BV. - 0142-1123 .- 1879-3452. ; 82:Part 2, s. 300-309
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Tidskriftsartikel (refereegranskat)abstract
- Abstract The use of specimen loss factor as fatigue damage indicator of Hastelloy-X substrates with different surface treatments was investigated together with other fatigue damage indicators, namely resonance frequency and crack mouth length. The tested surface treatments included grit-blasting and plasma spraying of NiCoCrAlY bond coat and yttria stabilized zirconia (YSZ) top coat. The loss factors of fatigue test specimens were measured repeatedly during the resonance bending fatigue test using the conventional free decay method. The analysis of the damping spectra, i.e. the model describing the relation of loss factor to maximum macroscopic specimen strain εyy was drafted. The model is based on the combination of defect models developed by Göken and Riehemann [1] and classical dislocation model of Granato and LÌcke [2]. It appears, that the damping spectra can be well approximated as a combination of two defect peaks (C1 and C2) and one dislocation peak (D1). The low strain defect peak (peak C1) is sensitive to the presence of fatigue cracks. The second defect peak (peak C2) can be attributed to the remaining substrate and coating defects such as embedded grit particles, coating porosity, surface roughness and sliding in the sample clamping area. The fatigue damage detection using the C1 peak magnitude was performed and its results were related to the crack length obtained by digital image correlation (DIC) method. In the crack initiation stage I., the C1 peak height shows different behavior than the resonance frequency and therefore provides new information. The underlying processes causing C1 peak changes need to be found yet, however. In the crack growth stage II., both resonance frequency and peak height C1 correlate with the measured fatigue crack size.
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| 10. |
- Kovářík, Ondrej, et al.
(författare)
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Resonance bending fatigue testing with simultaneous damping measurement and its application on layered coatings
- 2016
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Ingår i: International Journal of Fatigue. - : Elsevier BV. - 0142-1123 .- 1879-3452. ; 82, Part 2, s. 300-309
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Tidskriftsartikel (refereegranskat)abstract
- Abstract The use of specimen loss factor as fatigue damage indicator of Hastelloy-X substrates with different surface treatments was investigated together with other fatigue damage indicators, namely resonance frequency and crack mouth length. The tested surface treatments included grit-blasting and plasma spraying of NiCoCrAlY bond coat and yttria stabilized zirconia (YSZ) top coat. The loss factors of fatigue test specimens were measured repeatedly during the resonance bending fatigue test using the conventional free decay method. The analysis of the damping spectra, i.e. the model describing the relation of loss factor to maximum macroscopic specimen strain εyy was drafted. The model is based on the combination of defect models developed by Göken and Riehemann (2004) and classical dislocation model of Granato and LÌcke (1956). It appears, that the damping spectra can be well approximated as a combination of two defect peaks (C1 and C2) and one dislocation peak (D1). The low strain defect peak (peak C1) is sensitive to the presence of fatigue cracks. The second defect peak (peak C2) can be attributed to the remaining substrate and coating defects such as embedded grit particles, coating porosity, surface roughness and sliding in the sample clamping area. The fatigue damage detection using the C1 peak magnitude was performed and its results were related to the crack length obtained by digital image correlation (DIC) method. In the crack initiation stage I., the C1 peak height shows different behavior than the resonance frequency and therefore provides new information. The underlying processes causing C1 peak changes need to be found yet, however. In the crack growth stage II., both resonance frequency and peak height C1 correlate with the measured fatigue crack size.
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