| 131. |
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| 132. |
- Abbas, Aamer, 1973, et al.
(författare)
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Characterization and mapping of carotenoids in the algae Dunaliella and Phaeodactylum using Raman and target orthogonal partial least squares
- 2011
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Ingår i: Chemometrics and Intelligent Laboratory Systems. - : Elsevier BV. - 0169-7439 .- 1873-3239. ; 107:1, s. 174-177
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Tidskriftsartikel (refereegranskat)abstract
- A method was developed for the characterisation of carotenoid pigments in algal species using Raman spectroscopy in combination with multivariate hyperspectral analysis. Target orthogonal partial least squares (T-OPLS) operates by designating one known reference spectrum as the target. The target spectrum is put as the single y column in an OPLS regression model where the X matrix consists of the unfolded image spectra as variables in its columns. The spectral shape of the OPLS first orthogonal target score enabled us to verify the peak positions of the standard, and detect new peaks, not present in the reference standard. It was shown that the mixture of carotenoids present in the algae did not fully match the reference spectrum, however, the method provided enough information to make an analysis possible also in this case. The image results were constructed from the OPLS loading vectors that were showing a correlation map for the reference spectrum from the predictive loadings and maps of the occurrence of deviations from the orthogonal loadings.
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| 133. |
- Abbas, Aamer, 1973, et al.
(författare)
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Chemical images of marine bio-active compounds by surface enhanced Raman spectroscopy and transposed orthogonal partial least squares (T-OPLS)
- 2012
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Ingår i: Analytica Chimica Acta. - : Elsevier BV. - 0003-2670 .- 1873-4324. ; 737, s. 37-44
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Tidskriftsartikel (refereegranskat)abstract
- Surface enhanced Raman spectroscopy combined with transposed Orthogonal Partial Least Squares (T-OPLS) was shown to produce chemical images of the natural antibacterial surface-active compound 1,1,3,3-tetrabromo-2-heptanone (TBH) on Bonnemaisonia hamifera. The use of gold colloids function-alised with the internal standard 4-mercapto-benzonitrile (MBN) made it possible to create images of the relative concentration of TBH over the surfaces. A gradient of TBH could be mapped over and in the close vicinity of the B. hamifera algal vesicles at the attomol/pixel level. T-OPLS produced a measure of the spectral correlation for each pixel of the hyperspectral images whilst not including spectral variation that was linearly independent of the target spectrum. In this paper we show the possibility to retrieve specific spectral information with a low magnitude in a complex matrix.
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| 134. |
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| 135. |
- Abbas, Abdul-Karim, 1959, et al.
(författare)
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Bicarbonate-sensitive cysteine induced elevation of extracellular aspartate and glutamate in rat hippocampus in vitro
- 1997
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Ingår i: Neurochemistry International. - 0197-0186. ; 30:3, s. 253-259
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Tidskriftsartikel (refereegranskat)abstract
- The effect of different concentrations of cysteine (0.125, 0.25, 0.5 and 1 mM) on the net efflux of endogenous amino acids was studied by the incubation of rat hippocampal slices. Addition of cysteine (1 mM) in bicarbonate containing low K+ medium (5 min) selectively increased the basal net efflux of glutamate and aspartate by 370% and 396%, respectively. High K+ media (50 mM) containing cysteine (1 mM) evoked the net efflux of glutamate and aspartate by 1 454% and 1 019%, respectively. The corresponding effects in control slices without cysteine were 669% and 404%, respectively. No changes were observed on the concentrations of GABA, glutamine and taurine. The cysteine oxidation products, cysteine sulfinate (0.5 μM) and cystine (0.25 mM) were without effects. The effect of cysteine (0.5 mM) was dramatically reduced in media with no added bicarbonate/CO2. Thus, cysteine in a bicarbonate-sensitive manner selectively increases the extracellular concentration of excitotoxic amino acids in adult rat brain in vitro, possibly by interfering with the carrier-mediated glutamate uptake/ release
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| 136. |
- Abbas, Nada, et al.
(författare)
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Information Needs of Gravel Road Stakeholders
- 2022
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Ingår i: Infrastructures. - : MDPI. - 2412-3811. ; 7:12
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Tidskriftsartikel (refereegranskat)abstract
- Within any ecosystem, information sharing is essential. In this paper, the Swedish gravel road ecosystem is studied, where information plays a crucial role for the effective management of operations and maintenance. However, efficient information sharing is not enabled due to the lack of appropriate information systems. For addressing this issue, this paper intends to elicit information needs of gravel road stakeholders to support the design of a cloud-based information system. The main purpose is to explore the information needs of stakeholders within the Swedish gravel road ecosystem. Data were collected through in-depth semi-structured interviews with 11 participants representing key stakeholders in the ecosystem. Template analysis was used for analyzing the interview results. The major findings were a set of information needs covering road identification and condition, weather conditions, accessibility and traffic, maintenance policy, and sensor data. The results form a comprehensive information model for the further development of a cloud-based gravel road management system that would contribute to increased traffic safety and comfort, lower maintenance and management costs, and better decision-making abilities.
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| 137. |
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| 138. |
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| 139. |
- Abbas, Zareen, 1962, et al.
(författare)
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From restricted towards realistic models of salt solutions: Corrected Debye–Hückel theory and Monte Carlo simulations
- 2007
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Ingår i: Journal of Mathematical Fluid Mechanics. - : Elsevier BV. - 1422-6952 .- 1422-6928 .- 0378-3812. ; 260:2, s. 233-247
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Tidskriftsartikel (refereegranskat)abstract
- The properties of bulk salt solutions over wide concentration ranges are explored by a combination of simple physical theory and Monte Carlo (MC) simulations. The corrected Debye–Hückel (CDH) theory which incorporates ion size effects in a linear response approximation is extended to yield free energy and other thermodynamic properties by integration of the chemical potential over concentration. Charging integration which is usually used to obtain an electrostatic contribution of total free energy of electrolytes is avoided in this new direct approach. MC simulations are performed with a modified Widom particle insertion method, which also provides directly the ionic activity coefficients. The validity of the CDH theory is tested by comparison with the MC simulation data for 1:1, 2:1, 2:2 and 3:1 restricted primitive model (RPM) electrolytes over a wide concentration range and at various ion sizes. Mean ionic activity and osmotic coefficients calculated by the CDH theory in RPM approximation of electrolyte are fitted to experimental data by adjusting only a mean ionic diameter. Good fits up to 1 molal (m) concentration are obtained for a large number of salt solutions. MC simulations data for unrestricted primitive model (UPM) of 1:1 and 2:1 electrolytes are also fitted to the experimental data by varying the cation radius while keeping the anion radius fixed at a crystallographic value. The success of this approach is found to be salt specific. For example good fits up to 2 and 3.5 m concentrations were obtained for LiCl and LiBr, respectively. However in the case of less dissociated salts such as NaCl and KI the experimental data could only be fitted up to one molal concentration. Possibility of extending the applicability range of the CDH theory to concentrations >2 m is explored by including a concentration dependent dielectric constant as measured in experiments. Mean ionic activity coefficients for a number of salts could successfully be fitted up to 3 m concentration by adjusting only a mean ionic diameter. Difficulties encountered in simultaneously fitting the mean ionic activity and osmotic coefficients at salt concentrations >2 m are discussed.
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| 140. |
- Abbas, Zareen, 1962, et al.
(författare)
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Monte Carlo Simulations of Salt Solutions: Exploring the Validity of Primitive Models
- 2009
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Ingår i: Journal of Physical Chemistry B. - : American Chemical Society (ACS). - 1520-6106 .- 1520-5207. ; 113:17, s. 5905-5916
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Tidskriftsartikel (refereegranskat)abstract
- An extensive series of Monte Carlo (MC) simulations were performed in order to explore the validity of simple primitive models of electrolyte solutions and in particular the effect of ion size asymmetry on the bulk thermodynamic properties of real salt solutions. Ionic activity and osmotic coefficients were calculated for 1:1, 2:1, and 3:1 electrolytes by using the unrestricted primitive model (UPM); i.e., ions are considered as charged hard spheres of different sizes dissolved in a dielectric continuum. Mean ionic activity and osmotic coefficients calculated by the MC simulations were fitted simultaneously to the experimental data by adjusting only the cation radius while keeping the anion radius fixed at its crystallographic value. Ionic radii were further optimized by systematically varying the cation and anion radii at a fixed sum of ionic radii. The success of this approach is found to be highly salt specific. For example, experimental data (mean ionic activity and osmotic coefficients) of salts which are usually considered as dissociated such as HCl, HBr, LiCl, LiBr, LiClO4, and KOH were successfully fitted up to 1.9, 2.5, 1.9, 3, 2.5, and 4.5 M concentrations, respectively. In the case of partially dissociated salts such as NaCl, the successful fits were only obtained in a more restricted concentration range. Consistent sets of the best fitted cation radii were obtained for acids, alkali, and alkaline earth halides. A list of recommended ionic radii is also provided. The reliability of the optimized ionic radii was further tested in simulations of the osmotic coefficients of LiCl−NaCl−KCl salt mixtures. A very good agreement between the simulated and experimental data was obtained up to ionic strength of 4.5 M.
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