| 21. |
- Gontia, Paul, 1984, et al.
(författare)
-
Life cycle assessment of bio-based sodium polyacrylate production from pulp mill side streams: Case study of thermo-mechanical and sulfite pulp mills
- 2016
-
Ingår i: Journal of Cleaner Production. - : Elsevier BV. - 0959-6526. ; 131, s. 475-484
-
Tidskriftsartikel (refereegranskat)abstract
- Sodium polyacrylate (Na-PA) is a super absorbent polymer, which is commonly used in diverse hygiene products. The polymer is currently produced from fossil feedstock and its production consequently leads to adverse environmental impacts. Na-PA production from sugars present in pulp mill side streams can potentially be a successful way to achieve a more sustainable production of this polymer. In order to guide the development of a novel biochemical process for producing Na-PA, a life cycle assessment was done in which Na-PA produced from side streams of thermo-mechanical pulp (TMP) and sulfite pulp mills were compared. Furthermore, a comparison was made with Na-PA produced from fossil resources. The results show that the main determinant of the environmental impact of the bio-based Na-PA production is the free sugar content in the side streams. The lowest environmental impact is achieved by the least diluted side streams. More diluted side streams require larger amounts of energy for concentration, and, if the diluted streams are not concentrated, processes such as hydrolysis and detoxification, and fermentation are the environmental hotspots. Furthermore, the higher the yield of the fermentation process, the lower the environmental impact will be. Lastly, the production of bio-based Na-PA led to a lower global warming potential for some of the considered pulp mill side streams, but all of the other impacts considered were higher, when compared to fossil-based Na-PA production. Therefore, in parallel with efforts to develop a high-yield yeast for the fermentation process, technology developers should focus on low energy concentration processes for the side streams.
|
|
| 22. |
- Karlsson, Emma, 1983, et al.
(författare)
-
In silico and in vitro studies of the reduction of unsaturated α,β bonds of trans-2-hexenedioic acid and 6-amino-trans-2-hexenoic acid – Important steps towards biobased production of adipic acid
- 2018
-
Ingår i: PLoS ONE. - : Public Library of Science (PLoS). - 1932-6203 .- 1932-6203. ; 13:2
-
Tidskriftsartikel (refereegranskat)abstract
- The biobased production of adipic acid, a precursor in the production of nylon, is of great interest in order to replace the current petrochemical production route. Glucose-rich lignocel-lulosic raw materials have high potential to replace the petrochemical raw material. A number of metabolic pathways have been proposed for the microbial conversion of glucose to adipic acid, but achieved yields and titers remain to be improved before industrial applications are feasible. One proposed pathway starts with lysine, an essential metabolite industrially produced from glucose by microorganisms. However, the drawback of this pathway is that several reactions are involved where there is no known efficient enzyme. By changing the order of the enzymatic reactions, we were able to identify an alternative pathway with one unknown enzyme less compared to the original pathway. One of the reactions lacking known enzymes is the reduction of the unsaturated α,β bond of 6-amino-trans-2-hexenoic acid and trans-2hexenedioic acid. To identify the necessary enzymes, we selected N-ethylmaleimide reductase from Escherichia coli and Old Yellow Enzyme 1 from Saccharomyces pastorianus. Despite successful in silico docking studies, where both target substrates could fit in the enzyme pockets, and hydrogen bonds with catalytic residues of both enzymes were predicted, no in vitro activity was observed. We hypothesize that the lack of activity is due to a difference in electron withdrawing potential between the naturally reduced aldehyde and the carboxylate groups of our target substrates. Suggestions for protein engineering to induce the reactions are discussed, as well as the advantages and disadvantages of the two metabolic pathways from lysine. We have highlighted bottlenecks associated with the lysine pathways, and proposed ways of addressing them.
|
|
| 23. |
- Mukesh Kumar, Awasthi, et al.
(författare)
-
Bacterial dynamics during the anaerobic digestion of toxic citrus fruit waste and semi-continues volatile fatty acids production in membrane bioreactors
- 2022
-
Ingår i: Fuel. - : Elsevier. - 0016-2361 .- 1873-7153. ; 319
-
Tidskriftsartikel (refereegranskat)abstract
- Citrus wastes (CW) are normally toxic to anaerobic digestion (AD) because of flavors such as D-limonene. In this study, bacterial community was evaluated during volatile fatty acids (VFAs) production from CW inoculated by sludge in a membrane bioreactor (MBR) using semi-continuous AD with different organic loading rates (OLR). Four treatments including untreated CW filled with 4 and 8 g center dot VS center dot L(-1)d(-1) OLR (UOLR4 and UOLR8), pretreated Dlimonene-free CW filled with 4 and 8 g center dot VS center dot L(-1)d(-1) OLR (POLR4 and POLR8). The initial inoculum and the CW mixture (DAY0) was used as control for comparison. There was an obviously higher bacterial diversity in raw material (66848 sequences in DAY0), while decreased after AD and higher in POLR4 and POLR8 (65239 and 63916) than UOLR4 and UOLR8 (49158 and 51936). The key bacterial associated with VFAs production mainly affiliated to Firmicutes (37.35-84.73%), Bacteroidetes (0.48-36.87%), and Actinobacteria (0.35-29.38%), and the key genus composed of Lactobacillus, Prevotella, Bacillus, Bacteroides and Olsenella which contributed in VFA generation by degradable complex organic compounds. Noticeably, methanogen completely suppressed after MBR-AD and UOLR4 has greater acid utilizing bacteria (70.09%).
|
|
| 24. |
- Gullfot, Fredrika, 1967-
(författare)
-
Synthesis of xyloglucan oligo- and polysaccharides with glycosynthase technology
- 2009
-
Licentiatavhandling (övrigt vetenskapligt/konstnärligt)abstract
- Xyloglucans are polysaccharides found as storage polymers in seeds and tubers, and as cross-linking glycans in the cell wall of plants. Their structure is complex with intricate branching patterns, which contribute to the physical properties of the polysaccharide including its binding to and interaction with other glycans such as cellulose. Xyloglucan is widely used in bulk quantities in the food, textile and paper making industries. With an increasing interest in technically more advanced applications of xyloglucan, such as novel biocomposites, there is a need to understand and control the properties and interactions of xyloglucan with other compounds, to decipher the relationship between xyloglucan structure and function, and in particular the effect of different branching patterns. However, due to the structural heterogeneity of the polysaccharide as obtained from natural sources, relevant studies have not been possible to perform in practise. This fact has stimulated an interest in synthetic methods to obtain xyloglucan mimics and analogs with well-defined structure and decoration patterns. Glycosynthases are hydrolytically inactive mutant glycosidases that catalyse the formation of glycosidic linkages between glycosyl fluoride donors and glycoside acceptors. Since its first conception in 1998, the technology is emerging as a useful tool in the synthesis of large, complex polysaccharides. This thesis presents the generation and characterisation of glycosynthases based on xyloglucanase scaffolds for the synthesis of well-defined homogenous xyloglucan oligo- and polysaccharides with regular substitution patterns.
|
|
| 25. |
- Hong, Kuk-ki, 1976, et al.
(författare)
-
Metabolic Engineering of Saccharomyces cerevisiae: A Key Cell Factory Platform for Future Biorefineries
- 2012
-
Ingår i: Cellular and Molecular Life Sciences. - : Springer Science and Business Media LLC. - 1420-9071 .- 1420-682X. ; 69:16, s. 2671-2690
-
Forskningsöversikt (refereegranskat)abstract
- Metabolic engineering is the enabling science of development of efficient cell factories for the production of fuels, chemicals, pharmaceuticals, and food ingredients through microbial fermentations. The yeast Saccharomyces cerevisiae is a key cell factory already used for the production of a wide range of industrial products, and here we review ongoing work, particularly in industry, on using this organism for the production of butanol, which can be used as biofuel, and isoprenoids, which can find a wide range of applications including as pharmaceuticals and as biodiesel. We also look into how engineering of yeast can lead to improved uptake of sugars that are present in biomass hydrolyzates, and hereby allow for utilization of biomass as feedstock in the production of fuels and chemicals employing S. cerevisiae. Finally, we discuss the perspectives of how technologies from systems biology and synthetic biology can be used to advance metabolic engineering of yeast.
|
|
| 26. |
- Sunner, Hampus, 1981, et al.
(författare)
-
Fungal Ferulic Acid Esterases – Specificity and Phylogeny
- 2009
-
Ingår i: Italic5 Science and Technology of Biomasses Proceedings Book, M Orlandi, C Crestine (Ed.). Italic5/COST conference, Sept 1-4 2009, Varenna, Italy.
-
Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- Ferulic Acid Esterases (FAE) is a large heterogeneous group of enzymes with activity on esters of hydroxy- and metoxy- substituted cinnamic acid derivatives, such as ferulic acid. These ester bonds occur in the cell walls of plants and are especially common in grasses. As little systematic knowledge has been collected about this group of enzymes and only a few enzymes have been biochemically characterised to date, we have explored the phylogeny of FAEs using bioinformatic tools. We can conclude that the known Ferulic Acid Esterases belong to several evolutionary distant groups, two of which have dozens of highly related sequences, and a few groups with no members other than the known enzyme. The phylogeny also suggests certain similarities of substrate specificity within groups and proposes enzymes, whose biochemical characterisation would be especially informative for our understanding of the FAE families.
|
|
| 27. |
- Adeboye, Peter, 1982, et al.
(författare)
-
Conversion of lignin-derived phenolic compounds by Saccharomyces cerevisiae
- 2014
-
Ingår i: 36th Symposium on Biotechnology for Fuels and Chemicals, April 2-May 1st, Clearwater Beach, Florids, USA.
-
Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- Lignin breakdown during biomass pretreatment releases a wide array of phenolic compounds in lignocellulose hydrolysates. Phenolic compounds, together with organic acids and furaldehydes are known to be inhibitors of microbial fermentation, thus limiting the efficient bioconversion of lignocellulose biomass. The goal of our study is to improve S. cerevisiae tolerance to phenolic compounds from lignocellulose hydrolysates and investigate its conversion capacities. In particular, we aimed i) to establish a correlation between the phenolic compounds structure and the effect on yeast growth, and ii) to investigate the conversion/detoxification products of selected representative compounds in order to provide strain engineering strategies for enhanced phenolics conversion.First, the effect on S. cerevisiae growth of 13 different phenolic compounds commonly found in lignocellulose hydrolysates was characterized. The compounds could be grouped in three clusters, according to their effect on lag phase duration, specific growth rate and cell density. Next, coniferyl aldehyde, p-coumaric acid and ferulic acid were chosen as representative compounds and their conversion product by S. cerevisiae in aerobic culture in bioreactor were identified and followed throughout the fermentation time. Understanding the effect of different phenolics on yeast and their conversion/ detoxification pathways is the first step not only in strain engineering for enhanced robustness, but also for designing new biorefinery concepts, where the bioconversion of lignin-derived aromatics could potentially be the source of new bio-based chemicals.
|
|
| 28. |
- Adeboye, Peter, 1982, et al.
(författare)
-
DETOXIFICATION AS A STRATEGY FOR DEVELOPING TOLERANCE IN Saccharomyces cerevisiae TO PHENOLIC COMPOUNDS
- 2014
-
Ingår i: ISSY31: 31ST INTERNATIONAL SPECIALISED SYMPOSIUM ON YEAST.
-
Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- Several phenolic compounds are formed as products of lignin breakdown during pretreatment of lignocellulosic biomass. These phenolic compounds are inhibitory to cell growth and function as biocatalysts in the production of second generation biofuels from degraded lignocellulosic biomass. Our research is focused on developing a Saccharomyces cerevisiae strain with improved resistance to phenolic compounds.As part of our study, we have focused on understanding the ability of S. cerevisiae to tolerate and convert phenolic compounds. We aim to understand the conversion mechanisms of phenolic compounds and adapt the knowledge to the engineering and use of S. cerevisiae on a biotechnological platform for bioethanol production and prospective, novel bio-based chemicals.We have investigated toxicity of various phenolic compounds against S. cerevisiae. Our results showed that phenolic compounds have varied toxicity against S. cerevisiae and the toxicity may be dependent on the structure of the compound involved. Under aerobic batch cultivation conditions, we have also studied the conversion of phenolic compounds by S. cerevisiae using coniferyl aldehyde, ferulic acid and p-coumaric acid as representative phenolic compounds. We compiled a list of conversion products of the three starting compounds under investigation and we proposed a possible conversion pathway, currently being investigated.In this talk, we present the proposed conversion pathway through which S. cerevisiae converts and detoxifies coniferyl aldehyde, ferulic acid and p-coumaric acid under aerobic cultivation condition.
|
|
| 29. |
- Aulitto, Martina, 1991, et al.
(författare)
-
Seed culture pre-adaptation of Bacillus coagulans MA-13 improves lactic acid production in simultaneous saccharification and fermentation
- 2019
-
Ingår i: Biotechnology for Biofuels. - : Springer Science and Business Media LLC. - 1754-6834 .- 1754-6834. ; 12:1
-
Tidskriftsartikel (refereegranskat)abstract
- Background Lignocellulosic biomass is an abundant and sustainable feedstock, which represents a promising raw material for the production of lactic acid via microbial fermentation. However, toxic compounds that affect microbial growth and metabolism are released from the biomass upon thermochemical pre-treatment. So far, susceptibility of bacterial strains to biomass-derived inhibitors still represents a major barrier to lactic acid production from lignocellulose. Detoxification of the pre-treated lignocellulosic material by water washing is commonly performed to alleviate growth inhibition of the production microorganism and achieve higher production rates. Results In this study, we assessed the feasibility of replacing the washing step with integrated cellular adaptation during pre-culture of Bacillus coagulans MA-13 prior to simultaneous saccharification and lactic acid fermentation of steam exploded wheat straw. Using a seed culture pre-exposed to 30% hydrolysate led to 50% shorter process time, 50% higher average volumetric and 115% higher average specific productivity than when using cells from a hydrolysate-free seed culture. Conclusions Pre-exposure of B. coagulans MA-13 to hydrolysate supports adaptation to the actual production medium. This strategy leads to lower process water requirements and combines cost-effective seed cultivation with physiological pre-adaptation of the production strain, resulting in reduced lactic acid production costs.
|
|
| 30. |
- Bettiga, Maurizio, 1978, et al.
(författare)
-
Yeast physiology studies and metabolic engineering for enhanced robustness
- 2014
-
Ingår i: Enzitec 2014- XI Seminário Brasileiro de Tecnologia Enzimática. Barra da Tijuca-Rio de Janeiro, April 14th to 16th, 2014.
-
Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- The extensive research on second-generation ethanol has paved the way to a new concept of bio-based industry, where lignocellulosic material is the primary source of sugars, to be converted to a number of fuels and chemicals. Sugars are released from cellulose and hemicellulose by pretreatment and hydrolysis steps. Harsh conditions during pretreatment promote the formation of a number of inhibitory compounds, among which weak organic acids, furaldehydes and phenolic compounds. In addition, the product of interest can act as a potent inhibitor. Regardless of the product, robust microorganisms are a prerequisite for the feasibility of lignocellulose-based bioprocesses.Current research carried out by our group focuses on the yeast Saccharomyces cerevisiae and aims at investigating the molecular bases of microbial robustness. Our efforts include the identification of the molecular targets of different classes of fermentation inhibitors aiming at understanding the complex responses of the cells to these compounds. The final goal is to engineer more robust strains. The concept of robustness will be discussed and examples of key features for S. cerevisiae robustness as well as examples of successful engineering to increase robustness will be presented.In particular, during this presentation, the following results will be discussed i) the study of redox and energy metabolism as key determinants of tolerance; ii) conversion routes of in S. cerevisiae as a way of detoxification from phenolic compounds; iii) cell membrane engineering as a strategy to achieve enhanced tolerance to weak acids.
|
|
