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Strengthening global-change science by integrating aeDNA with paleoecoinformatics

Williams, John W. (author)
Department of Geography, University of Wisconsin-Madison, WI, Madison, United States
Spanbauer, Trisha L. (author)
Department of Environmental Science and Lake Erie Center, University of Toledo, OH, Toledo, United States
Heintzman, Peter, Dr. 1986- (author)
Stockholms universitet,Institutionen för geologiska vetenskaper,The Arctic University Museum of Norway
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Blois, Jessica (author)
Department of Life and Environmental Sciences, University of California -Merced, CA, Merced, United States
Capo, Eric (author)
Umeå universitet,Institutionen för ekologi, miljö och geovetenskap,Department of Marine Biology, Institut de Ciències del Mar, CSIC, Barcelona, Spain
Goring, Simon J. (author)
Department of Geography, University of Wisconsin-Madison, WI, Madison, United States
Monchamp, Marie-Eve (author)
Department of Biology, McGill University, QC, Montreal, Canada
Parducci, Laura, 1965- (author)
Uppsala universitet,Växtekologi och evolution,Department of Environmental Biology, Sapienza University of Rome, Piazzale Aldo Moro 5, Rome, Italy; Department of Ecology and Genetics, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18D, Uppsala, Sweden
Von Eggers, Jordan M. (author)
Department of Geology and Geophysics, University of Wyoming, WY, Laramie, United States
Alsos, Inger Greve (author)
Bowler, Chris (author)
Coolen, Marco J.L. (author)
Cullen, Nicola (author)
Crump, Sarah (author)
Epp, Laura Saskia (author)
Fernandez-Guerra, Antonio (author)
Grimm, Eric (author)
Herzschuh, Ulrike (author)
Mereghetti, Alessandro (author)
Meyer, Rachel Sarah (author)
Nota, Kevin (author)
Pedersen, Mikkel Winther (author)
Pérez, Vilma (author)
Shapiro, Beth (author)
Stoof-Leichsenring, Kathleen R. (author)
Wood, Jamie (author)
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 (creator_code:org_t)
Elsevier, 2023
2023
English.
In: Trends in Ecology & Evolution. - : Elsevier. - 0169-5347 .- 1872-8383. ; 38:10, s. 946-960
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • Ancient environmental DNA (aeDNA) data are close to enabling insights into past global-scale biodiversity dynamics at unprecedented taxonomic extent and resolution. However, achieving this potential requires solutions that bridge bioinformatics and paleoecoinformatics. Essential needs include support for dynamic taxonomic inferences, dynamic age inferences, and precise stratigraphic depth. Moreover, aeDNA data are complex and heterogeneous, generated by dispersed researcher networks, with methods advancing rapidly. Hence, expert community governance and curation are essential to building high-value data resources. Immediate recommendations include uploading metabarcoding-based taxonomic inventories into paleoecoinformatic resources, building linkages among open bioinformatic and paleoecoinformatic data resources, harmonizing aeDNA processing workflows, and expanding community data governance. These advances will enable transformative insights into global-scale biodiversity dynamics during large environmental and anthropogenic changes.

Subject headings

NATURVETENSKAP  -- Biologi -- Ekologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Ecology (hsv//eng)
NATURVETENSKAP  -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)

Keyword

ancient environmental DNA

Publication and Content Type

ref (subject category)
art (subject category)

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