| 1. |
- Drake, Henrik, 1979-, et al.
(författare)
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Ancient microbial activity in deep hydraulically conductive fracture zones within the Forsmark target area for deep geological nuclear waste disposal, Sweden
- 2018
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Ingår i: Geosciences. - : MDPI AG. - 2076-3263. ; 8
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Tidskriftsartikel (refereegranskat)abstract
- Recent studies reveal that organisms from all three domains of life—Archaea, Bacteria, and even Eukarya—can thrive under energy-poor, dark, and anoxic conditions at large depths in the fractured crystalline continental crust. There is a need for an increased understanding of the processes and lifeforms in this vast realm, for example, regarding the spatiotemporal extent and variability of the different processes in the crust. Here, we present a study that set out to detect signs of ancient microbial life in the Forsmark area—the target area for deep geological nuclear waste disposal in Sweden. Stable isotope compositions were determined with high spatial resolution analyses within mineral coatings, and mineralized remains of putative microorganisms were studied in several deep water-conducting fracture zones (down to 663 m depth), from which hydrochemical and gas data exist. Large isotopic variabilities of 13Ccalcite (?36.2 to +20.2‰V-PDB) and 34Spyrite (?11.7 to +37.8‰V-CDT) disclose discrete periods of methanogenesis, and potentially, anaerobic oxidation of methane and related microbial sulfate reduction at several depth intervals. Dominant calcite–water disequilibrium of 18O and 87Sr/86Sr precludes abundant recent precipitation. Instead, the mineral coatings largely reflect an ancient archive of episodic microbial processes in the fracture system, which, according to our microscale Rb–Sr dating of co-genetic adularia and calcite, date back to the mid-Paleozoic. Potential Quaternary precipitation exists mainly at ~400 m depth in one of the boreholes, where mineral–water compositions corresponded.
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| 2. |
- Capo, Eric, et al.
(författare)
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Oxygen-deficient water zones in the Baltic Sea promote uncharacterized Hg methylating microorganisms in underlying sediments
- 2022
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Ingår i: Limnology and Oceanography. - : Wiley. - 1939-5590 .- 0024-3590. ; 67:1
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Tidskriftsartikel (refereegranskat)abstract
- Human-induced expansion of oxygen-deficient zones can have dramatic impacts on marine systems and its resident biota. One example is the formation of the potent neurotoxic methylmercury (MeHg) that is mediated by microbial methylation of inorganic divalent Hg (HgII) under oxygen-deficient conditions. A negative consequence of the expansion of oxygen-deficient zones could be an increase in MeHg production due to shifts in microbial communities in favor of microorganisms methylating Hg. There is, however, limited knowledge about Hg-methylating microbes, i.e., those carrying hgc genes critical for mediating the process, from marine sediments. Here, we aim to study the presence of hgc genes and transcripts in metagenomes and metatranscriptomes from four surface sediments with contrasting concentrations of oxygen and sulfide in the Baltic Sea. We show that potential Hg methylators differed among sediments depending on redox conditions. Sediments with an oxygenated surface featured hgc-like genes and transcripts predominantly associated with uncultured Desulfobacterota (OalgD group) and Desulfobacterales (including Desulfobacula sp.) while sediments with a hypoxic-anoxic surface included hgc-carrying Verrucomicrobia, unclassified Desulfobacterales, Desulfatiglandales, and uncharacterized microbes. Our data suggest that the expansion of oxygen-deficient zones in marine systems may lead to a compositional change of Hg-methylating microbial groups in the sediments, where Hg methylators whose metabolism and biology have not yet been characterized will be promoted and expand.
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| 3. |
- Katrantsiotis, Christos, et al.
(författare)
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Seasonal variability in temperature trends and atmospheric circulation systems during the Eemian (Last Interglacial) based on n-alkanes hydrogen isotopes from Northern Finland
- 2021
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Ingår i: Quaternary Science Reviews. - Amsterdam : Elsevier. - 0277-3791 .- 1873-457X. ; 273, s. 107250-107250
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Tidskriftsartikel (refereegranskat)abstract
- The Last Interglacial warm period, the Eemian (ca. 130-116 thousand years ago), serves as a reference for projected future climate in a warmer world. However, there is a limited understanding of the seasonal characteristics of interglacial climate dynamics, especially in high latitude regions. In this study, we aimto provide new insights into seasonal trends in temperature and moisture source location, linked to shifts in atmospheric circulation patterns, for northern Fennoscandia during the Eemian. Our study is based on the distribution and stable hydrogen isotope composition (dD) of n-alkanes in a lake sediment sequence from the Sokli paleolake in NE Finland, placed in a multi-proxy framework. The dD values of predominantly macrophyte-derived mid-chain n-alkanes are interpreted to reflect lake water dD variability influenced by winter precipitation dD (dDprec), ice cover duration and deuterium (D)-depleted meltwater. The dD values of terrestrial plant-derived long-chain n-alkanes primarily reflect soil water dD variability modulated by summer dDprec and by the evaporative enrichment of soil and leaf water. The dDprec variability in our study area is mostly attributed to the temperature effect and the moisture source location linked to the relative dominance between D-depleted continental and polar air masses and Denriched North Atlantic air masses. The biomarker signal further corroborates earlier diatom-based studies and pollen-inferred January and July temperature reconstructions from the same sediment sequence. Three phases of climatic changes can be identified that generally follow the secular variationsin seasonal insolation: (i) an early warming trend succeeded by a period of strong seasonality (ii) a midoptimum phase with gradually decreased seasonality and cooler summers, and (iii) a late climatic instability with a cooling trend. Superimposed on this trend, two abrupt cooling events occur in the early and late Eemian. The Sokli dD variability is generally in good agreement with other North Atlantic and Siberian records, reflecting major changes in the atmospheric circulation patterns during the Eemian as a response to orbital and oceanic forcings.
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| 4. |
- Alvarez, Belinda, et al.
(författare)
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Assessing the potential of sponges (Porifera) as indicators of ocean dissolved Si concentrations
- 2017
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Ingår i: Frontiers in Marine Science. - : Frontiers Media SA. - 2296-7745. ; 4
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Tidskriftsartikel (refereegranskat)abstract
- We explore the distribution of sponges along dissolved silica (dSi) concentration gradients to test whether sponge assemblages are related to dSi and to assess the validity of fossil sponges as a palaeoecological tool for inferring dSi concentrations of the past oceans. We extracted sponge records from the publically available Global Biodiversity Information Facility (GBIF) database and linked these records with ocean physiochemical data to evaluate if there is any correspondence between dSi concentrations of the waters sponges inhabit and their distribution. Over 320,000 records of Porifera were available, of which 62,360 met strict quality control criteria. Our analyses was limited to the taxonomic levels of family, order and class. Because dSi concentration is correlated with depth in the modern ocean, we also explored sponge taxa distributions as a function of depth. We observe that while some sponge taxa appear to have dSi preferences (e.g., class Hexactinellida occurs mostly at high dSi), the overall distribution of sponge orders and families along dSi gradients is not sufficiently differentiated to unambiguously relate dSi concentrations to sponge taxa assemblages. We also observe that sponge taxa tend to be similarly distributed along a depth gradient. In other words, both dSi and/or another variable that depth is a surrogate for, may play a role in controlling sponge spatial distribution and the challenge is to distinguish between the two. We conclude that inferences about palaeo-dSi concentrations drawn from the abundance of sponges in the stratigraphic records must be treated cautiously as these animals are adapted to a great range of dSi conditions and likely other underlying variables that are related to depth. Our analysis provides a quantification of the dSi ranges of common sponge taxa, expands on previous knowledge related to their bathymetry preferences and suggest that sponge taxa assemblages are not related to particular dSi conditions.
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| 5. |
- Weis, Franz A., et al.
(författare)
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Magmatic water contents determined through clinopyroxene : Examples from the Western Canary Islands, Spain
- 2015
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Ingår i: Geochemistry Geophysics Geosystems. - 1525-2027. ; 16:7, s. 2127-2146
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Tidskriftsartikel (refereegranskat)abstract
- Water is a key parameter in magma genesis, magma evolution, and resulting eruption styles, because it controls the density, the viscosity, as well as the melting and crystallization behavior of a melt. The parental water content of a magma is usually measured through melt inclusions in minerals such as olivine, a method which may be hampered, however, by the lack of melt inclusions suitable for analysis, or postentrapment changes in their water content. An alternative way to reconstruct the water content of a magma is to use nominally anhydrous minerals (NAMs), such as pyroxene, which take up low concentrations of hydrogen as a function of the magma's water content. During magma degassing and eruption, however, NAMs may dehydrate. We therefore tested a method to reconstruct the water contents of dehydrated clinopyroxene phenocrysts from the Western Canary islands (n=28) through rehydration experiments followed by infrared and Mossbauer spectroscopy. Employing currently available crystal/melt partitioning data, the results of the experiments were used to calculate parental water contents of 0.710.07 to 1.490.15 wt % H2O for Western Canary magmas during clinopyroxene crystallization at upper mantle conditions. This H2O range is in agreement with calculated water contents using plagioclase-liquid-hygrometry, and with previously published data for mafic lavas from the Canary Islands and comparable ocean island systems elsewhere. Utilizing NAMs in combination with hydrogen treatment can therefore serve as a proxy for pre-eruptive H2O contents, which we anticipate becoming a useful method applicable to mafic rocks where pyroxene is the main phenocryst phase.
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| 6. |
- Vajda, Vivi, et al.
(författare)
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Geochemical Fingerprints of Ginkgoales Across the Triassic-Jurassic Boundary of Greenland
- 2021
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Ingår i: International journal of plant sciences. - Chicago : University of Chicago Press. - 1058-5893 .- 1537-5315. ; 182:7, s. 649-662
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Tidskriftsartikel (refereegranskat)abstract
- Premise of research. Geochemical fingerprinting of fossil plants is a relatively new research field complementing morphological analyses and providing information for paleoenvironmental interpretations. Ginkgoales contains a single extant species but was diverse through the Mesozoic and is an excellent target for biochemical analyses.Methodology. Cuticles derived from fresh and fallen autumn leaves of extant Ginkgo biloba and seven fossil gink- goalean leaf taxa, one seed fern taxon, and two taxa with bennettitalean affinity were analyzed by infrared (IR) microspec- troscopy at the D7 beamline in the MAX IV synchrotron laboratory, Sweden. The fossil material derives from Triassic and Jurassic successions of Greenland. Spectral data sets were compared and evaluated by hierarchical cluster analysis (HCA) and principal component analysis performed on vector-normalized, first-derivative IR absorption spectra.Pivotal results. The IR absorption spectra of the fossil leaves all reveal signatures that clearly indicate the pres- ence of organic compounds. Spectra of the extant G. biloba leaves reveal the presence of aliphatic chains, aromatic and ester carbonyl functional groups from polymer cutin and other waxy compounds, and polysaccharides. Inter- estingly, both the extant autumn leaves and the fossil specimens reveal the presence of carboxyl/ketone molecules, suggesting that chemical alterations during the initial stages of decomposition are preserved through fossilization. Two major subclusters were identified through HCA of the fossil spectra.Conclusions. Consistent chemical IR signatures, specific for each fossil taxon are present in cuticles, and suf- ficient molecular content is preserved in key regions to reflect the plants’ original chemical signatures. The alter- ations of the organic compounds are initiated as soon as the leaves are shed, with loss of proteins and increased ester and carboxyl/ketone compound production in the fallen leaves. We further show that the groupings of taxa reflect a combination of phylogeny and environmental conditions related to the end-Triassic event.
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| 7. |
- Drake, Henrik, 1979-, et al.
(författare)
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Incorporation of Metals into Calcite in a Deep Anoxic Granite Aquifer
- 2018
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Ingår i: Environmental Science & Technology. - : American Chemical Society (ACS). - 0013-936X .- 1520-5851 .- 1086-931X .- 1520-6912. ; 52:2, s. 493-502
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Tidskriftsartikel (refereegranskat)abstract
- Understanding metal scavenging by calcite in deep aquifers in granite is of importance for deciphering and modeling hydrochemical fluctuations and water rock interaction in the upper crust and for retention mechanisms associated With underground, repositories for toxic wastes. Metal scavenging into calcite has generally been established in the laboratory or in natural environments that cannot be unreservedly applied to conditions in deep crystalline rocks, an environment of broad interest, for nuclear waste repositories. Here, we report a microanalytical study: of calcite precipitated over a period of 17 years from anoxic, low-temperature (14 degrees C), neutral (pH: 7.4-7.7), and brackish (Cl: 1700-7100 mg/L) groundwater flowing in fractures at >400 m depth in granite rock. This enabled assessment of the trace metal uptake by calcite under these deep-seated conditions. Aquatic speciation modeling was carried out to assess influence of metal complexation on the partitioning into calcite. The resulting environment-specific partition coefficients were for several divalent ions in line with values obtained in controlled laboratory experiments, whereas for several other ions they differed substantially. High absolute uptake of rare earth elements and U(IV) suggests that coprecipitation into calcite can be an important sink for these metals and analogousactinides in the vicinity of geological repositories.
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| 8. |
- Klawonn, Isabell, et al.
(författare)
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Untangling hidden nutrient dynamics : rapid ammonium cycling and single-cell ammonium assimilation in marine plankton communities
- 2019
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Ingår i: The ISME Journal. - : Springer Science and Business Media LLC. - 1751-7362 .- 1751-7370. ; 13:8, s. 1960-1974
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Tidskriftsartikel (refereegranskat)abstract
- Ammonium is a central nutrient in aquatic systems. Yet, cell-specific ammonium assimilation among diverse functional plankton is poorly documented in field communities. Combining stable-isotope incubations (15N-ammonium, 15N2 and 13C-bicarbonate) with secondary-ion mass spectrometry, we quantified bulk ammonium dynamics, N2-fixation and carbon (C) fixation, as well as single-cell ammonium assimilation and C-fixation within plankton communities in nitrogen (N)-depleted surface waters during summer in the Baltic Sea. Ammonium production resulted from regenerated (≥91%) and new production (N2-fixation, ≤9%), supporting primary production by 78–97 and 2–16%, respectively. Ammonium was produced and consumed at balanced rates, and rapidly recycled within 1 h, as shown previously, facilitating an efficient ammonium transfer within plankton communities. N2-fixing cyanobacteria poorly assimilated ammonium, whereas heterotrophic bacteria and picocyanobacteria accounted for its highest consumption (~20 and ~20–40%, respectively). Surprisingly, ammonium assimilation and C-fixation were similarly fast for picocyanobacteria (non-N2-fixing Synechococcus) and large diatoms (Chaetoceros). Yet, the population biomass was high for Synechococcus but low for Chaetoceros. Hence, autotrophic picocyanobacteria and heterotrophic bacteria, with their high single-cell assimilation rates and dominating population biomass, competed for the same nutrient source and drove rapid ammonium dynamics in N-depleted marine waters.
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| 9. |
- Mosimane, Keotshephile, et al.
(författare)
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Variability in chemistry of surface and soil waters of an evapotranspiration-dominated flood-pulsed wetland : Solute processing in the okavango delta, Botswana
- 2017
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Ingår i: Water S.A.. - : Academy of Science of South Africa. - 1816-7950 .- 0378-4738. ; 43:1, s. 104-115
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Tidskriftsartikel (refereegranskat)abstract
- Water chemistry is important for the maintenance of wetland structure and function. Interpreting ecological patterns in a wetland system therefore requires an in-depth understanding of the water chemistry of that system. We investigated the spatial distribution of chemical solutes both in soil pore water and surface water, along island-floodplain-channel hydrological gradients in seasonally and permanently inundated habitats between major regions in the Okavango Delta, Botswana. Our results show that major cations (Ca, Na, Mg, and K), dissolved silica (DSi), dissolved boron (B), dissolved organic matter (DOC) and electrical conductivity increased significantly, at p ≤ 0.05, from the inlet of the Delta (the Panhandle) to the distal downstream reaches, suggesting the influence of evapoconcentration. Concentrations of dissolved Fe, Al, Zn, Cu, and Mn significantly decreased, at p ≤ 0.05, from the inflow of the Delta to the distal reaches. Only Na, Mn, Fe, Al, and DOC showed significant differences, at p ≤ 0.05, along the local floodplain-channel hydrological gradients, with higher solute concentrations in the floodplains than the channels. Solute concentrations in soil water exhibited similar distribution patterns to those in surface water, but concentrations were higher in soil water. Based on the results, we hypothesise that floodplain emergent vegetation and the channel-fringing vegetation in the Panhandle (a fault-bounded entry trough to the Delta) and the permanently inundated eco-region together influence the cycling of solutes that enter the Delta through uptake.
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| 10. |
- Drake, Henrik, et al.
(författare)
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Extreme fractionation and micro-scale variation of sulphur isotopes during bacterial sulphate reduction in deep groundwater systems
- 2015
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Ingår i: Geochimica Et Cosmochimica Acta. - : Elsevier BV. - 0016-7037 .- 1872-9533. ; 161, s. 1-18
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Tidskriftsartikel (refereegranskat)abstract
- This study conducted at the Aspo Hard Rock Laboratory, SE Sweden, determines the extent and mechanisms of sulphur-isotope fractionation in permanently reducing groundwater in fractured crystalline rock. Two boreholes > 400 m below the ground surface were investigated. In the 17-year-old boreholes, the Al instrumentation pipes had corroded locally (i.e., Al[oxy] hydroxides had formed) and minerals (i.e., pyrite, iron monosulphide, and calcite) had precipitated on various parts on the equipment. By chemically and isotopically comparing the precipitates on the withdrawn instrumentation and the borehole waters, we gained new insight into the dynamics of sulphate reduction, sulphide precipitation, and sulphur-isotope fractionation in deep-seated crystalline-rock settings. An astonishing feature of the pyrite is its huge variability in delta S-34, which can exceed 100 parts per thousand in total (i.e., -47.2 to +53.3 parts per thousand) and 60 parts per thousand over 50 mu m of growth in a single crystal. The values at the low end of the range are up to 71 parts per thousand lower than measured in the dissolved sulphate in the water (20-30 parts per thousand), which is larger than the maximum difference reported between sulphate and sulphide in pure-culture experiments (66 parts per thousand) but within the range reported from natural sedimentary settings. Although single-step reduction seems likely, further studies are needed to rule out the effects of possible S disproportionation. The values at the high end of the range (i.e., high delta S-34(py)) are much higher than could be produced from the measured sulphate under any biogeochemical conditions. This strongly suggests the development of closed-system conditions near the growing pyrite, i.e., the rate of sulphate reduction exceeds the rate of sulphate diffusion in the local fluid near the pyrite, causing the local aqueous phase (and thus the forming pyrite) to become successively enriched in heavy S (S-34). Consequently, the delta S-34 values of the forming pyrite become exceptionally high and strongly decoupled from the delta S-34 values of the sulphate in the bulk fluid. The Al-(oxy) hydroxide and calcite precipitates are explained by a combination of deposit and galvanic corrosion initiated by Al corrosion by H2S produced by sulphate-reducing microorganisms. (C) 2015 Elsevier Ltd. All rights reserved.
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