| 1. |
- Roth, Florian, et al.
(författare)
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High spatiotemporal variability of methane concentrations challenges estimates of emissions across vegetated coastal ecosystems.
- 2022
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Ingår i: Global change biology. - : Wiley. - 1365-2486 .- 1354-1013. ; 28:14, s. 4308-4322
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Tidskriftsartikel (refereegranskat)abstract
- Coastal methane (CH4 ) emissions dominate the global ocean CH4 budget and can offset the "blue carbon" storage capacity of vegetated coastal ecosystems. However, current estimates lack systematic, high-resolution, and long-term data from these intrinsically heterogeneous environments, making coastal budgets sensitive to statistical assumptions and uncertainties. Using continuous CH4 concentrations, δ13 C-CH4 values, and CH4 sea-air fluxes across four seasons in three globally pervasive coastal habitats, we show that the CH4 distribution is spatially patchy over meter-scales and highly variable in time. Areas with mixed vegetation, macroalgae, and their surrounding sediments exhibited a spatiotemporal variability of surface water CH4 concentrations ranging two orders of magnitude (i.e., 6-460 nM CH4 ) with habitat-specific seasonal and diurnal patterns. We observed (1) δ13 C-CH4 signatures that revealed habitat-specific CH4 production and consumption pathways, (2) daily peak concentration events that could change >100% within hours across all habitats, and (3) a high thermal sensitivity of the CH4 distribution signified by apparent activation energies of ~1 eV that drove seasonal changes. Bootstrapping simulations show that scaling the CH4 distribution from few samples involves large errors, and that ~50 concentration samples per day are needed to resolve the scale and drivers of the natural variability and improve the certainty of flux calculations by up to 70%. Finally, we identify northern temperate coastal habitats with mixed vegetation and macroalgae as understudied but seasonally relevant atmospheric CH4 sources (i.e., releasing ≥ 100 μmol CH4 m-2 day-1 in summer). Due to the large spatial and temporal heterogeneity of coastal environments, high-resolution measurements will improve the reliability of CH4 estimates and confine the habitat-specific contribution to regional and global CH4 budgets.
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| 2. |
- Bonaglia, Stefano, et al.
(författare)
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The fate of fixed nitrogen in marine sediments with low organic loading : an in situ study
- 2017
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Ingår i: Biogeosciences. - : Copernicus GmbH. - 1726-4170 .- 1726-4189. ; 14:2, s. 285-300
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Tidskriftsartikel (refereegranskat)abstract
- Over the last decades, the impact of human activities on the global nitrogen (N) cycle has drastically increased. Consequently, benthic N cycling has mainly been studied in anthropogenically impacted estuaries and coasts, while in oligotrophic systems its understanding is still scarce. Here we report on benthic solute fluxes and on rates of denitrification, anammox, and dissimilatory nitrate reduction to ammonium (DNRA) studied by in situ incubations with benthic chamber landers during two cruises to the Gulf of Bothnia (GOB), a cold, oligotrophic basin located in the northern part of the Baltic Sea. Rates of N burial were also inferred to investigate the fate of fixed N in these sediments. Most of the total dissolved fixed nitrogen (TDN) diffusing to the water column was composed of organic N. Average rates of dinitrogen (N-2) production by denitrification and anammox (range: 53-360 mu mol Nm(-2) day(-1)) were comparable to those from Arctic and subarctic sediments worldwide (range: 34-344 mu mol Nm(-2) day(-1)). Anammox accounted for 18-26% of the total N2 production. Absence of free hydrogen sulfide and low concentrations of dissolved iron in sediment pore water suggested that denitrification and DNRA were driven by organic matter oxidation rather than chemolithotrophy. DNRA was as important as denitrification at a shallow, coastal station situated in the northern Bothnian Bay. At this pristine and fully oxygenated site, ammonium regeneration through DNRA contributed more than one-third to the TDN efflux and accounted, on average, for 45% of total nitrate reduction. At the offshore stations, the proportion of DNRA in relation to denitrification was lower (0-16% of total nitrate reduction). Median value and range of benthic DNRA rates from the GOB were comparable to those from the southern and central eutrophic Baltic Sea and other temperate estuaries and coasts in Europe. Therefore, our results contrast with the view that DNRA is negligible in cold and well-oxygenated sediments with low organic carbon loading. However, the mechanisms behind the variability in DNRA rates between our sites were not resolved. The GOB sediments were a major source (237 kt yr(-1), which corresponds to 184% of the external N load) of fixed N to the water column through recycling mechanisms. To our knowledge, our study is the first to document the simultaneous contribution of denitrification, DNRA, anammox, and TDN recycling combined with in situ measurements.
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| 3. |
- Roth, Florian, et al.
(författare)
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Methane emissions offset atmospheric carbon dioxide uptake in coastal macroalgae, mixed vegetation and sediment ecosystems
- 2023
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Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 14
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Tidskriftsartikel (refereegranskat)abstract
- Coastal ecosystems can efficiently remove carbon dioxide (CO2) from the atmosphere and are thus promoted for nature-based climate change mitigation. Natural methane (CH4) emissions from these ecosystems may counterbalance atmospheric CO2 uptake. Still, knowledge of mechanisms sustaining such CH4 emissions and their contribution to net radiative forcing remains scarce for globally prevalent macroalgae, mixed vegetation, and surrounding depositional sediment habitats. Here we show that these habitats emit CH4 in the range of 0.1 – 2.9 mg CH4 m−2 d−1 to the atmosphere, revealing in situ CH4 emissions from macroalgae that were sustained by divergent methanogenic archaea in anoxic microsites. Over an annual cycle, CO2-equivalent CH4 emissions offset 28 and 35% of the carbon sink capacity attributed to atmospheric CO2 uptake in the macroalgae and mixed vegetation habitats, respectively, and augment net CO2 release of unvegetated sediments by 57%. Accounting for CH4 alongside CO2 sea-air fluxes and identifying the mechanisms controlling these emissions is crucial to constrain the potential of coastal ecosystems as net atmospheric carbon sinks and develop informed climate mitigation strategies.
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| 4. |
- Klawonn, Isabell, et al.
(författare)
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Untangling hidden nutrient dynamics : rapid ammonium cycling and single-cell ammonium assimilation in marine plankton communities
- 2019
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Ingår i: The ISME Journal. - : Springer Science and Business Media LLC. - 1751-7362 .- 1751-7370. ; 13:8, s. 1960-1974
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Tidskriftsartikel (refereegranskat)abstract
- Ammonium is a central nutrient in aquatic systems. Yet, cell-specific ammonium assimilation among diverse functional plankton is poorly documented in field communities. Combining stable-isotope incubations (15N-ammonium, 15N2 and 13C-bicarbonate) with secondary-ion mass spectrometry, we quantified bulk ammonium dynamics, N2-fixation and carbon (C) fixation, as well as single-cell ammonium assimilation and C-fixation within plankton communities in nitrogen (N)-depleted surface waters during summer in the Baltic Sea. Ammonium production resulted from regenerated (≥91%) and new production (N2-fixation, ≤9%), supporting primary production by 78–97 and 2–16%, respectively. Ammonium was produced and consumed at balanced rates, and rapidly recycled within 1 h, as shown previously, facilitating an efficient ammonium transfer within plankton communities. N2-fixing cyanobacteria poorly assimilated ammonium, whereas heterotrophic bacteria and picocyanobacteria accounted for its highest consumption (~20 and ~20–40%, respectively). Surprisingly, ammonium assimilation and C-fixation were similarly fast for picocyanobacteria (non-N2-fixing Synechococcus) and large diatoms (Chaetoceros). Yet, the population biomass was high for Synechococcus but low for Chaetoceros. Hence, autotrophic picocyanobacteria and heterotrophic bacteria, with their high single-cell assimilation rates and dominating population biomass, competed for the same nutrient source and drove rapid ammonium dynamics in N-depleted marine waters.
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| 5. |
- Brüchert, Volker, et al.
(författare)
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Hydrogen sulphide and methane emissions on the central Namibian shelf
- 2009
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Ingår i: Progress in Oceanography. - : Elsevier. - 0079-6611 .- 1873-4472. ; 83:1-4, s. 169-179
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Tidskriftsartikel (refereegranskat)abstract
- Hydrogen sulphide occurs frequently in the waters of the inner shelf coastal upwelling area off central Namibia. The area affected coincides with hatching grounds of commercially important pelagic fish, whose recruitment may be severely affected by recurring toxic sulphidic episodes. Both episodic biogenic methane gas-driven advective and molecular diffusive flux of hydrogen sulphide have been implicated as transport mechanisms from the underlying organic-matter-rich diatomaceous mud. To test hypotheses on the controls of hydrogen sulphide transport from the sediments on the inner Namibian shelf, water column and sediment data were acquired from four stations between 27 and 72 m water depth over a 3 year long period. On 14 cruises, temperature, salinity, dissolved oxygen, nitrate, methane, and total dissolved sulphide were determined from water column samples, and pore water dissolved methane, total dissolved sulphide, biomass of benthic sulphide-oxidising bacteria Beggiatoa and Thiomargarita, and bacterial sulphate reduction rates were determined from sediment cores. Superimposed on a trend of synchronous changes in water column oxygen and nutrient concentrations controlled by regional hydrographic conditions were asynchronous small-scale variations at the in-shore stations that attest to localized controls on water column chemistry. Small temporal variations in sulphate reduction rates determined with 35S-labeled sulphate do not support the interpretation that variable emissions of sulphide and methane from sediments are driven by temporal changes in the degradation rates of freshly deposited organic matter. The large temporal changes in the concentrations of hydrogen sulphide and the co-occurrence of pore water sulphate and methane support an interpretation of episodic advection of methane and hydrogen sulphide from deeper sediment depths – possibly due to gas bubble transport. Effective fluxes of hydrogen sulphide and methane to the water column, and methane and sulphide concentrations in the bottom waters were decoupled, likely due to the activity of sulphide-oxidising bacteria. While the causal mechanism for the episodic fluctuations in methane and dissolved sulphide concentrations remains unclear, this data set points to the importance of alternating advective and diffusive transport of methane and hydrogen sulphide to the water column.
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| 6. |
- Prytherch, John, et al.
(författare)
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Central Arctic Ocean surface-atmosphere exchange of CO2 and CH4 constrained by direct measurements
- 2024
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Ingår i: Biogeosciences. - : Copernicus Publications. - 1726-4170 .- 1726-4189. ; 21, s. 671-688
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Tidskriftsartikel (refereegranskat)abstract
- The central Arctic Ocean (CAO) plays an important role in the global carbon cycle, but the current and future exchange of the climate-forcing trace gases methane (CH4) and carbon dioxide (CO2) between the CAO and the atmosphere is highly uncertain. In particular, there are very few observations of near-surface gas concentrations or direct air-sea CO2 flux estimates and no previously reported direct air-sea CH4 flux estimates from the CAO. Furthermore, the effect of sea ice on the exchange is not well understood. We present direct measurements of the air-sea flux of CH4 and CO2, as well as air-snow fluxes of CO2 in the summertime CAO north of 82.5 N from the Synoptic Arctic Survey (SAS) expedition carried out on the Swedish icebreaker Oden in 2021. Measurements of air-sea CH4 and CO2 flux were made using floating chambers deployed in leads accessed from sea ice and from the side of Oden, and air-snow fluxes were determined from chambers deployed on sea ice. Gas transfer velocities determined from fluxes and surface-water-dissolved gas concentrations exhibited a weaker wind speed dependence than existing parameterisations, with a median sea-ice lead gas transfer rate of 2.5 cm h-1 applicable over the observed 10m wind speed range (1-11 m s-1). The average observed air-sea CO2 flux was -7.6 mmol m-2 d-1, and the average air-snow CO2 flux was -1.1 mmol m-2 d-1. Extrapolating these fluxes and the corresponding sea-ice concentrations gives an August and September flux for the CAO of -1.75 mmol m-2 d-1, within the range of previous indirect estimates. The average observed air-sea CH4 flux of 3.5 μmol m-2 d-1, accounting for sea-ice concentration, equates to an August and September CAO flux of 0.35 μmol m-2 d-1, lower than previous estimates and implying that the CAO is a very small (<< 1%) contributor to the Arctic flux of CH4 to the atmosphere.
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| 7. |
- Dale, Andrew, et al.
(författare)
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An integrated sulfur isotope model for Namibian shelf sediments
- 2009
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Ingår i: Geochimica et Cosmochimica Acta. - : Elsevier. - 0016-7037 .- 1872-9533. ; 73:7, s. 1924-1944
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Tidskriftsartikel (refereegranskat)abstract
- In this study the sulfur cycle in the organic-rich mud belt underlying the highly productive upwelling waters of the Namibian shelf is quantified using a 1D reaction-transport model. The model calculates vertical concentration and reaction rate profiles in the top 500 cm of sediment which are compared to a comprehensive dataset which includes carbon, sulfur, nitrogen and iron compounds as well as sulfate reduction (SR) rates and stable sulfur isotopes (32S, 34S). The sulfur dynamics in the well-mixed surface sediments are strongly influenced by the activity of the large sulfur bacteria Thiomargaritanamibiensis which oxidize sulfide (H2S) to sulfate () using sea water nitrate () as the terminal electron acceptor. Microbial sulfide oxidation (SOx) is highly efficient, and the model predicts intense cycling between and H2S driven by coupled SR and SOx at rates exceeding 6.0 mol S m−2 y−1. More than 96% of the SR is supported by SOx, and only 2–3% of the pool diffuses directly into the sediment from the sea water. A fraction of the produced by Thiomargarita is drawn down deeper into the sediment where it is used to oxidize methane anaerobically, thus preventing high methane concentrations close to the sediment surface. Only a small fraction of total H2S production is trapped as sedimentary sulfide, mainly pyrite (FeS2) and organic sulfur (Sorg) (∼0.3 wt.%), with a sulfur burial efficiency which is amongst the lowest values reported for marine sediments (<1%). Yet, despite intense SR, FeS2 and Sorg show an isotope composition of ∼5 ‰ at 500 cm depth. These heavy values were simulated by assuming that a fraction of the solid phase sulfur exchanges isotopes with the dissolved sulfide pool. An enrichment in H2S of 34S towards the sediment-water interface suggests that Thiomargarita preferentially remove H232S from the pore water. A fractionation of 20–30‰ was estimated for SOx (εSOx) with the model, along with a maximum fractionation for SR (εSR–max) of 100‰. These values are far higher than previous laboratory-based estimates for these processes. Mass balance calculations indicate negligible disproportionation of autochthonous elemental sulfur; an explanation routinely cited in the literature to account for the large fractionations in SR. Instead, the model indicates that repeated multi-stepped sulfide oxidation and intracellular disproportionation by Thiomargarita could, in principle, allow the measured isotope data to be simulated using much lower fractionations for εSOx (5‰) and εSR (78‰).
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| 8. |
- Brüchert, Volker, et al.
(författare)
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Sediment med nyckelroll i näringsväven
- 2014
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Ingår i: Havsutsikt. - 1104-0513. ; 2014:1, s. 20-21
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Tidskriftsartikel (populärvet., debatt m.m.)abstract
- I sedimenten sker processer som kan vara helt avgörande för näringsbalansen i havsvattnet. Omvandlingen av fosfor till olika former är relativt väl känd, medan detaljerna i kvävets kretslopp är betydligt mindre kända. Mer än hälften av den årliga tillförseln av kväve till Östersjön beräknas omsättas till kvävgas i sedimentet, vilket sedan går förlorat för de flesta marina organismer.
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| 9. |
- Isabell, Klawonn, et al.
(författare)
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Aerobic and anaerobic nitrogen transformation processes in N-2-fixing cyanobacterial aggregates
- 2015
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Ingår i: Isme Journal. - : Springer Science and Business Media LLC. - 1751-7362 .- 1751-7370. ; 9:6, s. 1456-1466
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Tidskriftsartikel (refereegranskat)abstract
- Colonies of N-2-fixing cyanobacteria are key players in supplying new nitrogen to the ocean, but the biological fate of this fixed nitrogen remains poorly constrained. Here, we report on aerobic and anaerobic microbial nitrogen transformation processes that co-occur within millimetre-sized cyanobacterial aggregates (Nodularia spumigena) collected in aerated surface waters in the Baltic Sea. Microelectrode profiles showed steep oxygen gradients inside the aggregates and the potential for nitrous oxide production in the aggregates' anoxic centres. N-15-isotope labelling experiments and nutrient analyses revealed that N-2 fixation, ammonification, nitrification, nitrate reduction to ammonium, denitrification and possibly anaerobic ammonium oxidation (anammox) can co-occur within these consortia. Thus, N. spumigena aggregates are potential sites of nitrogen gain, recycling and loss. Rates of nitrate reduction to ammonium and N-2 were limited by low internal nitrification rates and low concentrations of nitrate in the ambient water. Presumably, patterns of N-transformation processes similar to those observed in this study arise also in other phytoplankton colonies, marine snow and fecal pellets. Anoxic microniches, as a pre-condition for anaerobic nitrogen transformations, may occur within large aggregates (>= 1 mm) even when suspended in fully oxygenated waters, whereas anoxia in small aggregates (<1 to >= 0.1 mm) may only arise in lowoxygenated waters (<= 25 mu M). We propose that the net effect of aggregates on nitrogen loss is negligible in NO3--depleted, fully oxygenated (surface) waters. In NO3--enriched (>1.5 mu M), O-2-depleted water layers, for example, in the chemocline of the Baltic Sea or the oceanic mesopelagic zone, aggregates may promote N-recycling and -loss processes.
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| 10. |
- Ahmed, Engy, et al.
(författare)
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Mineral Type Structures Soil Microbial Communities
- 2017
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Ingår i: Geomicrobiology Journal. - : Taylor & Francis. - 0149-0451 .- 1521-0529. ; 34:6, s. 538-545
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Tidskriftsartikel (refereegranskat)abstract
- Soil microorganisms living in close contact with minerals play key roles in the biogeochemical cycling of elements, soil formation, and plant nutrition. Yet, the composition of microbial communities inhabiting the mineralosphere (i.e., the soil surrounding minerals) is poorly understood. Here, we explored the composition of soil microbial communities associated with different types of minerals in various soil horizons. To this effect, a field experiment was set up in which mineral specimens of apatite, biotite, and oligoclase were buried in the organic, eluvial, and upper illuvial horizons of a podzol soil. After an incubation period of two years, the soil attached to the mineral surfaces was collected, and microbial communities were analyzed by means of Illumina MiSeq sequencing of the 16S (prokaryotic) and 18S (eukaryotic) ribosomal RNA genes. We found that both composition and diversity of bacterial, archaeal, and fungal communities varied across the different mineral surfaces, and that mineral type had a greater influence on structuring microbial assemblages than soil horizon. Thus, our findings emphasize the importance of mineral surfaces as ecological niches in soils.
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