| 1. |
- Antzutkin, Oleg
(författare)
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Amyloidosis of Alzheimer's A peptides : solid-state nuclear magnetic resonance, electron paramagnetic resonance, transmission electron microscopy, scanning transmission electron microscopy and atomic force microscopy studies
- 2004
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Ingår i: Magnetic Resonance in Chemistry. - : Wiley. - 0749-1581 .- 1097-458X. ; 42:2, s. 231-246
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Tidskriftsartikel (refereegranskat)abstract
- Aggregation cascade for Alzheimer's amyloid-β peptides, its relevance to neurotoxicity in the course of Alzheimer's disease and experimental methods useful for these studies are discussed. Details of the solid-phase peptide synthesis and sample preparation procedures for Alzheimer's β-amyloid fibrils are given. Recent progress in obtaining structural constraints on Aβ-fibrils from solid-state NMR and scanning transmission electron microscopy (STEM) data is discussed. Polymorphism of amyloid fibrils and oligomers of the 'Arctic' mutant of Aβ(1-40) was studied by 1H,13C solid-state NMR, transmission electron microscopy (TEM) and atomic force microscopy (AFM), and a real-time aggregation of different polymorphs of the peptide was observed with the aid of in situ AFM. Recent results on binding of Cu(II) ions and Al-citrate and Al-ATP complexes to amyloid fibrils, as studied by electron paramagnetic resonance (EPR) and solid-state 27Al NMR techniques, are also presented.
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| 2. |
- Antzutkin, Oleg, et al.
(författare)
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Binding of Aluminium(III)-Citrate Complexes, [Al3(H-1Cit)3(OH)]-4 and [Al3(H-1Cit)3(OH)4]-7, to Alzheimer's A-beta(1-40) Peptides : In situ Atomic Force, Electron Microscopy and Solid State 13C and 27Al NMR Studies
- 2005
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Ingår i: Sixth Keele Meeting on Aluminium. - : Centro de Estudos do Ambiente e Mar, Universidade de Aveiro. ; , s. 16-
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Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- It is believed that Alzheimer's disease (AD) amyloid-β-peptide (Aβ) deposits contribute directly to the disease's progressive neurodegeneration. Aggregation cascade for Aβ peptides, its relevance to neurotoxicity in the course of AD, various factors modulating Aβ aggregation kinetics and experimental methods useful for these studies were recently discussed [1]. Al(III), Zn(II), Cu(II) and Fe(III) ions are often colocalized at the center of the core of Alzheimer's amyloid plaques [2] and are suggested to promote aggregation of physiological concentrations of Aβ [3]. It has also been suggested that Al can block calcium permeable putative Aβ-peptide channels in bilayer membranes [4]. Therefore studies of complexation of metal ions with Aβ-oligomers and fibrils are important in the search for the causes of and potential treatments for AD.We studied effects of highly soluble and biologically relevant aluminium(III)-citrate compounds, [Al3(H-1Cit)3(OH)]-4 and [Al3(H-1Cit)3(OH)4]-7, on the fibrillogenesis of Aβ(1-40). All resonances in 156.37 MHz 27Al and 90.52 MHz 13C MAS NMR spectra of powder Al(III)-citrate complexes were assigned. 27Al MAS NMR of dialysed samples of Aβ(1-40) co-incubated with the Al(III)-citrate complexes at different concentrations in TRIS buffer solutions, pH 7.4, shows that Al(III)-citrates bind to Aβ(1-40) as [Al3(H-1Cit)3(OH)]-4 and either accelerate ([Al3(H-1Cit)3(OH)]-4 complex) or retard ([Al3(H-1Cit)3(OH)4]-7 compound) aggregation of Aβ(1-40) as revealed by AFM. [1] ON Antzutkin, Magn. Reson. Chem. 42 (2004) 231; [2] MA Lovell et al., J. Neurol. Sci. 158 (1998) 47; Ch Exley et al., Al and Alzheimer's disease, Ch Exley (Ed)1998) 47; Ch Exley , Ch Exley (Ed) Elsevier Science, 2001, 421; [3] PW Mantyh et al., J. Neurochem. 61 (1993) 1171; [4] N Arispe et al, PNAS 90 (1993) 567.
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| 3. |
- Antzutkin, Oleg, et al.
(författare)
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Coherence transfer signals in the rotational resonance NMR of a spinning single crystal
- 2000
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Ingår i: Journal of magnetic resonance. - : Elsevier BV. - 1090-7807 .- 1096-0856. ; 147:1, s. 147-151
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Tidskriftsartikel (refereegranskat)abstract
- A recent analysis of rotational resonance lineshapes (M. Helmle et al., J. Magn. Reson. 140, 379-403, 1999) predicted the existence of coherence transfer signals, which are generated by mechanically induced coherence transfer during the detection process. These signals correspond to the generation of observable coherences at spin sites that have no magnetization at the beginning of the observation interval but which acquire coherence while the detection is underway. The coherence transfer signals disappear for powder samples in conventional magic-angle-spinning solid-state NMR experiments. In this Communication, we report the successful detection of coherence transfer signals in rotor-synchronized experiments performed on a single crystal of [1,2-13C2]glycine.
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| 4. |
- Antzutkin, Oleg, et al.
(författare)
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Exploring solid-state 17O NMR to distinguish secondary structures in Alzheimer's Aβ fibrils
- 2009
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Ingår i: Euromar 2009. ; , s. 107-
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Konferensbidrag (övrigt vetenskapligt/konstnärligt)abstract
- It has been shown by a large number of studies that Alzheimer's disease (AD) amyloid-β-peptide (Aβ) deposits contribute directly to the disease's progressive neurodegeneration. Aggregation cascade for Aβ peptides, its relevance to neurotoxicity in the course of AD, various factors modulating Aβ aggregation kinetics and experimental methods useful for these studies were recently discussed [1]. Results of Tycko and co-workers point at neurotoxicity in vitro of the two different types of Alzheimer's amyloid fibrils dispersed by ultrasonication into small fragments [2]. The high toxicity of Aβ oligomers in vitro has been discussed by Stege et. al who have found that the molecular chaperone αB-crystallin prevents Aβ from forming amyloid fibrils but nevertheless enhances Aβ toxicity [3]. Glabe and co-workes successfully prepared antibodies for Aβ oligomers and small spherical aggregates using nanogold technology [4]. They also have shown that these antibodies decrease toxicity of Aβ for SH-SY5Y human neuroblastoma cell cultures in vitro [4]. In this concern both structure of Aβ-oligomers/fibrils and the specific interaction (aggregation/fusion) of Aβ peptides with nerve cell membranes is of a particular importance [5].We explore Solid-State 17O NMR on selectively 17O,13C,15N-labeled Aβ(1-40), Aβ(11-25) and Ac-Aβ(16-22)-NH2 peptides to distinguish a parallel and anti-parallel β-sheet secondary structures in β-NH2 peptides to distinguish a parallel and anti-parallel β-sheet secondary structures in amyloid fibrils. Aβ(1-40) fibrils form in-registry parallel β-sheets [6], while Aβ(11-25) [7] and Ac-Aβ(16-22)-NH2 [8] form different anti-parallel β-sheet structures, which were previously identified β-NH2 [8] form different anti-parallel β-sheet structures, which were previously identified by 13C multiple-quantum and 13C{15N} REDOR solid-state NMR. In our unpublished work presented here it was found that 17O NMR chemical shifts are sensitive to the type of the secondary structure, i. e. a parallel vs. an anti-parallel β-sheet structures, while the quadrupolar parameters of 17O nuclei unexpectedly do not vary beyond the error limits in the simulated lineshapes of both fibrillized and unfibrillized peptide systems. Results of more advanced solidstate NMR techniques to measure heteronuclear distances, 15N{17O}-REAPDOR, 15N{17O}-TRAPDOR and 17O{15N}-REDOR on selectively 17O-Val18 and 15N-Phe20 labeled Ac-Aβ(16-22)-NH2 fibrils will be also discussed. These novel solid-state NMR experiments will provide additional tools for measuring hydrogen bonding in different secondary structures of peptides in amyloid fibrils.[1.] O.N.Antzutkin, Magn. Reson. Chem. 42 (2004) 231-246; [2.] A.Petkova et al. Science 307 (2005) 262-265; [3.] G.J.J.Stege, et al. Biochem. Biophys. Res. Comm., 262 (1999) 152-156;[4.] R.Kayed et al. Science, 300 (2003) 486-489; [5.] M.Bokvist, et al. J. Mol. Biol. 335 (2004) 1039-1049; [6.] O.N. Antzutkin, et al. Proc. Nat. Acad. Sci, U.S.A., 97 (2000) 13045-13050;[7.] A.T. Petkova, et al. J. Mol. Biol., 335 (2004) 247-260;[8.] J.J. Balbach, Y. (2000) 13045-13050; [9] A.T. Petkova, (2004) 247-260; [10] J.J. Balbach, Y.Ishii, O.N. Antzutkin, et al. Biochemistry 39 (2000) 13748-13759.
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| 5. |
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| 6. |
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| 7. |
- Antzutkin, Oleg, et al.
(författare)
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Multiple quantum solid-state NMR indicates a parallel, not antiparallel, organization of β-sheets in Alzheimer's β-amyloid fibrils
- 2000
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Ingår i: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 0027-8424 .- 1091-6490. ; 97:24, s. 13045-13050
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Tidskriftsartikel (refereegranskat)abstract
- Senile plaques associated with Alzheimer's disease contain deposits of fibrils formed by 39- to 43-residue β-amyloid peptides with possible neurotoxic effects. X-ray diffraction measurements on oriented fibril bundles have indicated an extended β-sheet structure for Alzheimer's β-amyloid fibrils and other amyloid fibrils, but the supramolecular organization of the β-sheets and other structural details are not well established because of the intrinsically noncrystalline, insoluble nature of amyloid fibrils. Here we report solid-state NMR measurements, using a multiple quantum (MQ) 13C NMR technique, that probe the β-sheet organization in fibrils formed by the full-length, 40-residue β-amyloid peptide (Aβ1-40). Although an antiparallel β-sheet organization often is assumed and is invoked in recent structural models for full-length β-amyloid fibrils, the MQNMR data indicate an in-register, parallel organization. This work provides site-specific, atomic-level structural constraints on full-length β-amyloid fibrils and applies MQNMR to a significant problem in structural biology.
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| 8. |
- Antzutkin, Oleg
(författare)
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Polymorphism of Alzheimer´s A-beta Amyloid Fibrils
- 2006
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Ingår i: Modern Magnetic Resonance. - Dordrecht : Encyclopedia of Global Archaeology/Springer Verlag. - 9781402038945 - 9781402039102 ; , s. 15-23
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Bokkapitel (övrigt vetenskapligt/konstnärligt)abstract
- An overview of the strategy and experimental solid-state NMR, STEM, and AFM methods useful for obtaining structural constraints on Alzheimer’s amyloid-β peptide fibrils is presented. Polymorphism of amyloid fibrils and the relevance to neurotoxicity is discussed.
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| 9. |
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| 10. |
- Antzutkin, Oleg, et al.
(författare)
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Site-Specific Identification of Non-ß-Strand Conformations in Alzheimer's ß-Amyloid Fibrils by Solid-State NMR
- 2003
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Ingår i: Biophysical Journal. - 0006-3495 .- 1542-0086. ; 84:5, s. 3326-3335
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Tidskriftsartikel (refereegranskat)abstract
- The most well-established structural feature of amyloid fibrils is the cross-ß motif, an extended ß-sheet structure formed by ß-strands oriented perpendicular to the long fibril axis. Direct experimental identification of non-ß-strand conformations in amyloid fibrils has not been reported previously. Here we report the results of solid-state NMR measurements on amyloid fibrils formed by the 40-residue ß-amyloid peptide associated with Alzheimer's disease (Aß1-40), prepared synthetically with pairs of 13C labels at consecutive backbone carbonyl sites. The measurements probe the peptide backbone conformation in residues 24-30, a segment where a non-ß-strand conformation has been suggested by earlier sequence analysis, cross-linking experiments, and molecular modeling. Data obtained with the fpRFDR-CT, DQCSA, and 2D MAS exchange solid-state NMR techniques, which provide independent constraints on the and backbone torsion angles between the labeled carbonyl sites, indicate non-ß-strand conformations at G25, S26, and G29. These results represent the first site-specific identification and characterization of non-ß-strand peptide conformations in an amyloid fibril
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