| 1. |
|
|
| 2. |
- Bakker, F. T., et al.
(författare)
-
The Global Museum: natural history collections and the future of evolutionary science and public education
- 2020
-
Ingår i: PeerJ. - : PeerJ. - 2167-8359. ; 8
-
Tidskriftsartikel (refereegranskat)abstract
- Natural history museums are unique spaces for interdisciplinary research and educational innovation. Through extensive exhibits and public programming and by hosting rich communities of amateurs, students, and researchers at all stages of their careers, they can provide a place-based window to focus on integration of science and discovery, as well as a locus for community engagement. At the same time, like a synthesis radio telescope, when joined together through emerging digital resources, the global community of museums (the 'Global Museum') is more than the sum of its parts, allowing insights and answers to diverse biological, environmental, and societal questions at the global scale, across eons of time, and spanning vast diversity across the Tree of Life. We argue that, whereas natural history collections and museums began with a focus on describing the diversity and peculiarities of species on Earth, they are now increasingly leveraged in new ways that significantly expand their impact and relevance. These new directions include the possibility to ask new, often interdisciplinary questions in basic and applied science, such as in biomimetic design, and by contributing to solutions to climate change, global health and food security challenges. As institutions, they have long been incubators for cutting-edge research in biology while simultaneously providing core infrastructure for research on present and future societal needs. Here we explore how the intersection between pressing issues in environmental and human health and rapid technological innovation have reinforced the relevance of museum collections. We do this by providing examples as food for thought for both the broader academic community and museum scientists on the evolving role of museums. We also identify challenges to the realization of the full potential of natural history collections and the Global Museum to science and society and discuss the critical need to grow these collections. We then focus on mapping and modelling of museum data (including place-based approaches and discovery), and explore the main projects, platforms and databases enabling this growth. Finally, we aim to improve relevant protocols for the long-term storage of specimens and tissues, ensuring proper connection with tomorrow's technologies and hence further increasing the relevance of natural history museums.
|
|
| 3. |
- Cawood, Peter A., et al.
(författare)
-
Neoproterozoic to early Paleozoic extensional and compressional history of East Laurentian margin sequences : The Moine Supergroup, Scottish Caledonides
- 2015
-
Ingår i: Geological Society of America Bulletin. - 0016-7606 .- 1943-2674. ; 127:3-4, s. 349-371
-
Tidskriftsartikel (refereegranskat)abstract
- Neoproterozoic siliciclastic-dominated sequences are widespread along the eastern margin of Laurentia and are related to rifting associated with the breakout of Laurentia from the supercontinent Rodinia. Detrital zircons from the Moine Supergroup, NW Scotland, yield Archean to early Neoproterozoic U-Pb ages, consistent with derivation from the Grenville-Sveconorwegian orogen and environs and accumulation post–1000 Ma. U-Pb zircon ages for felsic and associated mafic intrusions confirm a widespread pulse of extension-related magmatism at around 870 Ma. Pegmatites yielding U-Pb zircon ages between 830 Ma and 745 Ma constrain a series of deformation and metamorphic pulses related to Knoydartian orogenesis of the host Moine rocks. Additional U-Pb zircon and monazite data, and 40Ar/39Ar ages for pegmatites and host gneisses indicate high-grade metamorphic events at ca. 458–446 Ma and ca. 426 Ma during the Caledonian orogenic cycle.The presence of early Neoproterozoic siliciclastic sedimentation and deformation in the Moine and equivalent successions around the North Atlantic and their absence along strike in eastern North America reflect contrasting Laurentian paleogeography during the breakup of Rodinia. The North Atlantic realm occupied an external location on the margin of Laurentia, and this region acted as a locus for accumulation of detritus (Moine Supergroup and equivalents) derived from the Grenville-Sveconorwegian orogenic welt, which developed as a consequence of collisional assembly of Rodinia. Neoproterozoic orogenic activity corresponds with the inferred development of convergent plate-margin activity along the periphery of the supercontinent. In contrast in eastern North America, which lay within the internal parts of Rodinia, sedimentation did not commence until the mid-Neoproterozoic (ca. 760 Ma) during initial stages of supercontinent fragmentation. In the North Atlantic region, this time frame corresponds to a second pulse of extension represented by units such as the Dalradian Supergroup, which unconformably overlies the predeformed Moine succession.
|
|
| 4. |
- Feng, Shaohong, et al.
(författare)
-
Dense sampling of bird diversity increases power of comparative genomics
- 2020
-
Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 587:7833
-
Tidskriftsartikel (refereegranskat)abstract
- Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity(1-4). Sparse taxon sampling has previously been proposed to confound phylogenetic inference(5), and captures only a fraction of the genomic diversity. Here we report a substantial step towards the dense representation of avian phylogenetic and molecular diversity, by analysing 363 genomes from 92.4% of bird families-including 267 newly sequenced genomes produced for phase II of the Bird 10,000 Genomes (B10K) Project. We use this comparative genome dataset in combination with a pipeline that leverages a reference-free whole-genome alignment to identify orthologous regions in greater numbers than has previously been possible and to recognize genomic novelties in particular bird lineages. The densely sampled alignment provides a single-base-pair map of selection, has more than doubled the fraction of bases that are confidently predicted to be under conservation and reveals extensive patterns of weak selection in predominantly non-coding DNA. Our results demonstrate that increasing the diversity of genomes used in comparative studies can reveal more shared and lineage-specific variation, and improve the investigation of genomic characteristics. We anticipate that this genomic resource will offer new perspectives on evolutionary processes in cross-species comparative analyses and assist in efforts to conserve species. A dataset of the genomes of 363 species from the Bird 10,000 Genomes Project shows increased power to detect shared and lineage-specific variation, demonstrating the importance of phylogenetically diverse taxon sampling in whole-genome sequencing.
|
|
| 5. |
- Jastrzebski, Miroslaw, et al.
(författare)
-
Geochronology, petrogenesis and geodynamic significance of the Visean igneous rocks in the Central Sudetes, northeastern Bohemian Massif
- 2018
-
Ingår i: Lithos. - : Elsevier BV. - 0024-4937 .- 1872-6143. ; 316-317, s. 385-405
-
Tidskriftsartikel (refereegranskat)abstract
- New sensitive high-resolution ion microprobe (SHRIMP) UPb zircon geochronologic data, whole-rock geochemical and Sr-Nd-Pb isotopic data, and zircon and quartz Ύ18O isotopic data from the Staré Město granitoids (SMG), Jawornik granitoids (JG), and Kłodzko-Złoty Stok granitoids (KZSG) and associated mafic and ultramafic rocks are examined. This study provides new insights into the processes of magma generation, transport and emplacement during the Variscan development of the contact zone of the Saxothuringia, Teplá-Barrandia and Brunovistulia in the Central European portion of the Variscan belt. The results of this study, combined with existing geochemical and isotopic data, imply that the parental magmas of these intrusions share a close affinity and suggest that these intrusions formed in a subduction-related tectonic setting. The SMG, JG and KZSG magmas represent hybrids that formed from the contamination of partial melts from the lower crust and/or subducted sediments with various proportions of enriched mantle-derived melts. These mainly sheeted plutons intruded along the main geological boundaries during the Visean and recorded the vertical and lateral displacements between the major tectono-stratigraphic units (microplates) in the NE Bohemian Massif. In the Central Sudetes, these granitoid magmas were first emplaced along the northern continuation of the Moldanubian Zone. The SHRIMP UPb dating of zircons indicates that the SMG intruded the reactivated suture zone between the Brunovistulia and Saxothuringia at 344–341 Ma. Sills of the JG were emplaced between c. 347 and c. 334 Ma. The composite Kłodzko-Złoty Stok Pluton, which includes the KZSG and accompanying mafic enclaves and pyroxenite and lamprophyre dykes, was mainly emplaced at 340–333 Ma. The magmas of the KZSG possibly facilitated the final amalgamation of the Sudetic counterparts of the Teplá-Barrandia and Saxothuringia microplates during the orogenic uplift of the latter. Petrologic and oxygen isotopic data further indicate partial post-magmatic hydrothermal and/or alteration processes. Our new data further stress the connection of magma transfer and active shear zones, which could manifest as crustal-scale magma-ascent conduits.
|
|
| 6. |
|
|
| 7. |
- Zamora, Juan Carlos, et al.
(författare)
-
Considerations and consequences of allowing DNA sequence data as types of fungal taxa
- 2018
-
Ingår i: IMA Fungus. - : INT MYCOLOGICAL ASSOC. - 2210-6340 .- 2210-6359. ; 9:1, s. 167-185
-
Tidskriftsartikel (refereegranskat)abstract
- Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify biological diversity) with nomenclature (an artificial agreement to name biological diversity). Two proposals to amend the International Code of Nomenclature for algae, fungi, and plants (ICN), allowing DNA sequences alone (of any region and extent) to serve as types of taxon names for voucherless fungi (mainly putative taxa from environmental DNA sequences), have been submitted to be voted on at the 11th International Mycological Congress (Puerto Rico, July 2018). We consider various genetic processes affecting the distribution of alleles among taxa and find that alleles may not consistently and uniquely represent the species within which they are contained. Should the proposals be accepted, the meaning of nomenclatural types would change in a fundamental way from physical objects as sources of data to the data themselves. Such changes are conducive to irreproducible science, the potential typification on artefactual data, and massive creation of names with low information content, ultimately causing nomenclatural instability and unnecessary work for future researchers that would stall future explorations of fungal diversity. We conclude that the acceptance of DNA sequences alone as types of names of taxa, under the terms used in the current proposals, is unnecessary and would not solve the problem of naming putative taxa known only from DNA sequences in a scientifically defensible way. As an alternative, we highlight the use of formulas for naming putative taxa (candidate taxa) that do not require any modification of the ICN.
|
|
