| 1. |
- Charette, M, et al.
(author)
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The Transpolar Drift as a Source of Riverine and Shelf‐Derived Trace Elements to the Central Arctic Ocean
- 2020
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In: Journal of Geophysical Research - Oceans. - 2169-9275 .- 2169-9291. ; 125, s. 1-34
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Journal article (peer-reviewed)abstract
- A major surface circulation feature of the Arctic Ocean is the Transpolar Drift (TPD), a current that transports river‐influenced shelf water from the Laptev and East Siberian Seas toward the center of the basin and Fram Strait. In 2015, the international GEOTRACES program included a high‐resolution pan‐Arctic survey of carbon, nutrients, and a suite of trace elements and isotopes (TEIs). The cruises bisected the TPD at two locations in the central basin, which were defined by maxima in meteoric water and dissolved organic carbon concentrations that spanned 600 km horizontally and ~25–50 m vertically. Dissolved TEIs such as Fe, Co, Ni, Cu, Hg, Nd, and Th, which are generally particle‐reactive but can be complexed by organic matter, were observed at concentrations much higher than expected for the openocean setting. Other trace element concentrations such as Al, V, Ga, and Pb were lower than expected due to scavenging over the productive East Siberian and Laptev shelf seas. Using a combination of radionuclide tracers and ice drift modeling, the transport rate for the core of the TPD was estimated at 0.9 ± 0.4 Sv(106m3 s−1). This rate was used to derive the mass flux for TEIs that were enriched in the TPD, revealing the importance of lateral transport in supplying materials beneath the ice to the central Arctic Ocean and potentially to the North Atlantic Ocean via Fram Strait. Continued intensification of the Arctic hydrologicc ycle and permafrost degradation will likely lead to an increase in the flux of TEIs into the Arctic Ocean.
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| 2. |
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| 3. |
- Feng, Shaohong, et al.
(author)
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Dense sampling of bird diversity increases power of comparative genomics
- 2020
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In: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 587:7833
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Journal article (peer-reviewed)abstract
- Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity(1-4). Sparse taxon sampling has previously been proposed to confound phylogenetic inference(5), and captures only a fraction of the genomic diversity. Here we report a substantial step towards the dense representation of avian phylogenetic and molecular diversity, by analysing 363 genomes from 92.4% of bird families-including 267 newly sequenced genomes produced for phase II of the Bird 10,000 Genomes (B10K) Project. We use this comparative genome dataset in combination with a pipeline that leverages a reference-free whole-genome alignment to identify orthologous regions in greater numbers than has previously been possible and to recognize genomic novelties in particular bird lineages. The densely sampled alignment provides a single-base-pair map of selection, has more than doubled the fraction of bases that are confidently predicted to be under conservation and reveals extensive patterns of weak selection in predominantly non-coding DNA. Our results demonstrate that increasing the diversity of genomes used in comparative studies can reveal more shared and lineage-specific variation, and improve the investigation of genomic characteristics. We anticipate that this genomic resource will offer new perspectives on evolutionary processes in cross-species comparative analyses and assist in efforts to conserve species. A dataset of the genomes of 363 species from the Bird 10,000 Genomes Project shows increased power to detect shared and lineage-specific variation, demonstrating the importance of phylogenetically diverse taxon sampling in whole-genome sequencing.
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| 4. |
- Bakker, F. T., et al.
(author)
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The Global Museum: natural history collections and the future of evolutionary science and public education
- 2020
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In: PeerJ. - : PeerJ. - 2167-8359. ; 8
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Journal article (peer-reviewed)abstract
- Natural history museums are unique spaces for interdisciplinary research and educational innovation. Through extensive exhibits and public programming and by hosting rich communities of amateurs, students, and researchers at all stages of their careers, they can provide a place-based window to focus on integration of science and discovery, as well as a locus for community engagement. At the same time, like a synthesis radio telescope, when joined together through emerging digital resources, the global community of museums (the 'Global Museum') is more than the sum of its parts, allowing insights and answers to diverse biological, environmental, and societal questions at the global scale, across eons of time, and spanning vast diversity across the Tree of Life. We argue that, whereas natural history collections and museums began with a focus on describing the diversity and peculiarities of species on Earth, they are now increasingly leveraged in new ways that significantly expand their impact and relevance. These new directions include the possibility to ask new, often interdisciplinary questions in basic and applied science, such as in biomimetic design, and by contributing to solutions to climate change, global health and food security challenges. As institutions, they have long been incubators for cutting-edge research in biology while simultaneously providing core infrastructure for research on present and future societal needs. Here we explore how the intersection between pressing issues in environmental and human health and rapid technological innovation have reinforced the relevance of museum collections. We do this by providing examples as food for thought for both the broader academic community and museum scientists on the evolving role of museums. We also identify challenges to the realization of the full potential of natural history collections and the Global Museum to science and society and discuss the critical need to grow these collections. We then focus on mapping and modelling of museum data (including place-based approaches and discovery), and explore the main projects, platforms and databases enabling this growth. Finally, we aim to improve relevant protocols for the long-term storage of specimens and tissues, ensuring proper connection with tomorrow's technologies and hence further increasing the relevance of natural history museums.
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| 5. |
- Cros, Emilie, et al.
(author)
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Fine‐scale barriers to connectivity across a fragmented South‐East Asian landscape in six songbird species
- 2020
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In: Evolutionary Applications. - 1752-4571. ; 13:5, s. 1026-1036
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Journal article (peer-reviewed)abstract
- Habitat fragmentation is a major extinction driver. Despite dramatically increas-ing fragmentation across the globe, its specific impacts on population connectivityacross species with differing life histories remain difficult to characterize, let alonequantify. Here, we investigate patterns of population connectivity in six songbirdspecies from Singapore, a highly fragmented tropical rainforest island. Using massivepanels of genome-wide single nucleotide polymorphisms across dozens of samplesper species, we examined population genetic diversity, inbreeding, gene flow andconnectivity among species along a spectrum of ecological specificities. We found ahigher resilience to habitat fragmentation in edge-tolerant and forest-canopy speciesas compared to forest-dependent understorey insectivores. The latter exhibited lev-els of genetic diversity up to three times lower in Singapore than in populations fromcontiguous forest elsewhere. Using dense genomic and geographic sampling, weidentified individual barriers such as reservoirs that effectively minimize gene flowin sensitive understorey birds, revealing that terrestrial forest species may exhibitlevels of sensitivity to fragmentation far greater than previously expected. This studyprovides a blueprint for conservation genomics at small scales with a view to iden-tifying preferred locations for habitat corridors, flagging candidate populations forrestocking with translocated individuals and improving the design of future reserves.
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| 7. |
- Winton, V.H.L., et al.
(author)
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Multiple sources of soluble atmospheric iron to Antarctic waters
- 2016
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In: Global Biogeochemical Cycles. - : John Wiley & Sons. - 0886-6236 .- 1944-9224. ; 30:3, s. 421-437
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Journal article (peer-reviewed)abstract
- The Ross Sea, Antarctica, is a highly productive region of the Southern Ocean. Significant new sources of iron (Fe) are required to sustain phytoplankton blooms in the austral summer. Atmospheric deposition is one potential source. The fractional solubility of Fe is an important variable determining Fe availability for biological uptake. To constrain aerosol Fe inputs to the Ross Sea region, fractional solubility of Fe was analyzed in a snow pit from Roosevelt Island, eastern Ross Sea. In addition, aluminum, dust, and refractory black carbon (rBC) concentrations were analyzed, to determine the contribution of mineral dust and combustion sources to the supply of aerosol Fe. We estimate exceptionally high dissolved Fe (dFe) flux of 1.2 × 10−6 g m−2 y−1 and total dissolvable Fe flux of 140 × 10−6 g m−2 y−1 for 2011/2012. Deposition of dust, Fe, Al, and rBC occurs primarily during spring-summer. The observed background fractional Fe solubility of ~0.7% is consistent with a mineral dust source. Radiogenic isotopic ratios and particle size distribution of dust indicates that the site is influenced by local and remote sources. In 2011/2012 summer, relatively high dFe concentrations paralleled both mineral dust and rBC deposition. Around half of the annual aerosol Fe deposition occurred in the austral summer phytoplankton growth season; however, the fractional Fe solubility was low. Our results suggest that the seasonality of dFe deposition can vary and should be considered on longer glacial-interglacial timescales.
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| 8. |
- Winton, V.H.L., et al.
(author)
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The origin of lithogenic sediment in the south-western Ross Sea and implications for iron fertilization
- 2016
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In: Antarctic Science. - Cambridge : Cambridge University Press. - 0954-1020 .- 1365-2079. ; 28:4, s. 250-260
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Journal article (peer-reviewed)abstract
- Summer iron (Fe) fertilization in the Ross Sea has previously been observed in association with diatom productivity, lithogenic particles and excess Fe in the water column. This productivity event occurred during an early breakout of sea ice via katabatic winds, suggesting that aeolian dust could be an important source of lithogenic Fe required for diatom growth in the Ross Sea. Here we investigate the provenance of size-selected dust deposited on sea ice in McMurdo Sound, south-western (SW) Ross Sea. The isotopic signature of McMurdo Sound dust (0.70533< 87Sr/86Sr< 0.70915 and -1.1 < εNd(0) <3.45)confirms that dust is locally sourced from the McMurdo Sound debris bands and comprises a two-component mixture of McMurdo Volcanic Group and southern Victoria Land lithologies. In addition, the provenance of lithogenic sediment trapped in the water column was investigated, and the isotopic signature (εNd(0) =3.9, 87Sr/86Sr = 0.70434) is differentiated from long-range transported dust originating from South America and Australia. Elevated lithogenic accumulation rates in deeper sediment traps in the Ross Sea suggest that sinking articles in the water column cannot simply result from dust input at the surface. This discrepancy can be best explained by significant upwelling and remobilization of lithogenic Fe from the sea floor.
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