| 1. |
- Michel, M., et al.
(författare)
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Small-molecule activation of OGG1 increases oxidative DNA damage repair by gaining a new function
- 2022
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Ingår i: Science. - Stockholm : American Association for the Advancement of Science. - 0036-8075 .- 1095-9203. ; 376:6600, s. 1471-1476
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Tidskriftsartikel (refereegranskat)abstract
- Oxidative DNA damage is recognized by 8-oxoguanine (8-oxoG) DNA glycosylase 1 (OGG1), which excises 8-oxoG, leaving a substrate for apurinic endonuclease 1 (APE1) and initiating repair. Here, we describe a small molecule (TH10785) that interacts with the phenylalanine-319 and glycine-42 amino acids of OGG1, increases the enzyme activity 10-fold, and generates a previously undescribed b,d-lyase enzymatic function. TH10785 controls the catalytic activity mediated by a nitrogen base within its molecular structure. In cells, TH10785 increases OGG1 recruitment to and repair of oxidative DNA damage. This alters the repair process, which no longer requires APE1 but instead is dependent on polynucleotide kinase phosphatase (PNKP1) activity. The increased repair of oxidative DNA lesions with a small molecule may have therapeutic applications in various diseases and aging. © 2022 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works
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| 2. |
- Henriksson, Erik, et al.
(författare)
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Multiple loop self-triggered model predictive control for network scheduling and control
- 2015
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Ingår i: IEEE Transactions on Control Systems Technology. - : IEEE Press. - 1063-6536 .- 1558-0865. ; 23:6, s. 2167-2181
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Tidskriftsartikel (refereegranskat)abstract
- We present an algorithm for controlling and scheduling multiple linear time-invariant processes on a shared bandwidth-limited communication network using adaptive sampling intervals. The controller is centralized and not only computes at every sampling instant the new control command for a process but also decides the time interval to wait until taking the next sample.The approach relies on model predictive control ideas, where the cost function penalizes the state and control effort as well as the time interval until the next sample is taken. The latter is introduced to generate an adaptive sampling scheme for the overall system such that the sampling time increases as the norm of the system state goes to zero. This paper presents a method for synthesizing such a predictive controller and gives explicit sufficient conditions for when it is stabilizing. Further explicit conditions are given that guarantee conflict free transmissions on the network. It is shown that the optimization problem may be solved offline and that the controller can be implemented as a lookup table of state feedback gains. The simulation studies which compare the proposed algorithm to periodic sampling illustrate potential performance gains.
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| 3. |
- Zhao, Yadong, et al.
(författare)
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Cellulose Nanofibers from Softwood, Hardwood, and Tunicate : Preparation-Structure-Film Performance Interrelation
- 2017
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Ingår i: ACS Applied Materials and Interfaces. - : American Chemical Society (ACS). - 1944-8244 .- 1944-8252. ; 9:15, s. 13508-13519
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Tidskriftsartikel (refereegranskat)abstract
- This work reveals the structural variations of cellulose nanofibers (CNF) prepared from different cellulose sources, including softwood (Picea abies), hardwood (Eucalyptus grandis × E. urophylla), and tunicate (Ciona intestinalis), using different preparation processes and their correlations to the formation and performance of the films prepared from the CNF. Here, the CNF are prepared from wood chemical pulps and tunicate isolated cellulose by an identical homogenization treatment subsequent to either an enzymatic hydrolysis or a 2,2,6,6-tetramethylpiperidinyl-1-oxyl (TEMPO)-mediated oxidation. They show a large structural diversity in terms of chemical, morphological, and crystalline structure. Among others, the tunicate CNF consist of purer cellulose and have a degree of polymerization higher than that of wood CNF. Introduction of surface charges via the TEMPO-mediated oxidation is found to have significant impacts on the structure, morphology, optical, mechanical, thermal, and hydrophobic properties of the prepared films. For example, the film density is closely related to the charge density of the used CNF, and the tensile stress of the films is correlated to the crystallinity index of the CNF. In turn, the CNF structure is determined by the cellulose sources and the preparation processes. This study provides useful information and knowledge for understanding the importance of the raw material for the quality of CNF for various types of applications.
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| 4. |
- Helander, Mikaela, et al.
(författare)
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Fractionation of Technical Lignin: Molecular Mass and pH Effects
- 2013
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Ingår i: BioResources. - : BioResources. - 1930-2126 .- 1930-2126. ; 8:2, s. 2270-2282
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Tidskriftsartikel (refereegranskat)abstract
- Today, lignin from kraft pulping is used mainly as fuel, with only very small amounts being used as raw material for chemicals and materials. This work focuses on using a convenient method for separating large amounts of low molecular weight lignin from the kraft process. Low molecular weight lignin contains larger amounts of phenolic structural units, which are possible modification sites and can be used as antioxidants. Moreover, a product that has reduced polydispersity, low molecular weight, and purified lignin could be a potential material for new applications. The studied process for separating lignin from weak black liquor used a membrane with a cut-off of 1000 Da. During precipitation of the 1000 Da permeate, it is necessary to prevent formation of fairly large, rigid particles/agglomerates of lignin by keeping the temperature low. To improve the dead-end filtration, higher ionic strength is needed for the weak black liquor. Additionally, reducing the end pH will cause more material to precipitate. More sulfur was found in the low molecular weight lignin and at lower precipitation pH, indicating that most sulfur left in the lignin samples might be bound to low molecular weight lignin.
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| 5. |
- Moser, Carl, 1987-, et al.
(författare)
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Specific surface area increase during cellulose nanofiber manufacturing related to energy input
- 2016
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Ingår i: BioResources. - : North Carolina State University. - 1930-2126. ; 11:3, s. 7124-7132
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Tidskriftsartikel (refereegranskat)abstract
- Softwood fibers pretreated with a monocomponent endoglucanase were used to prepare a series of cellulose nanofiber qualities using a microfluidizer and 2 to 34 MWh ton-1 of energy input. The specific surface area was determined for the series using critical point drying and gas adsorption. Although the specific surface area reached a maximum of 430 m2 g-1 at 11 MWh ton-1, the nanofiber yield and transmittance continued to increase beyond this point, indicating that more energy is required to overcome possible friction caused by an interwoven nanofiber network unrelated to the specific surface area. A new method for estimating the surface area was investigated using xyloglucan adsorption in pure water. With this method it was possible to follow the disintegration past the point of maximum specific surface area. The technical significance of these findings is discussed.
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| 6. |
- Moser, Carl, et al.
(författare)
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Toward Industrially Feasible Methods for Following the Process of Manufacturing Cellulose Nanofibers
- 2015
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Ingår i: BioResources. - : BioResources. - 1930-2126. ; 10:2, s. 2360-2375
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Tidskriftsartikel (refereegranskat)abstract
- Nanocellulose is a recently developed form of cellulose that has the potential to be used in many different industries, ranging from food to high-performance applications. This material is commercially manufactured through the homogenization of chemical pulps, but the process is energy-consuming and is still an important subject for development. Simple, robust methods are required for the quality control and optimization of industrial nanocellulose production. In this study, a number of different methods, based on different principles of monitoring the manufacture of cellulose nanofibers were evaluated and compared for five different nanocellulose qualities, both for their resolution and robustness/ease. Methods based on microscopy, light scattering, centrifugation, and viscosity were examined and all appeared useful for observing the manufacturing process during its initial stage. However, only methods based on centrifugation, turbidity, and transmittance yielded reliable data for the entire manufacturing process. Of these methods, transmittance measurement may be the best candidate for routine use because the method is simple, rapid, and only requires spectrophotometer equipment.
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| 7. |
- Wang, Yan
(författare)
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Pretreatment and Enzymatic Treatment of Spruce : A functional designed wood components separation for a future biorefinery
- 2014
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Doktorsavhandling (övrigt vetenskapligt/konstnärligt)abstract
- The three main components of wood, namely, cellulose, hemicellulose, and lignin, can be used in various areas. However, since lignin covalently crosslinks with wood polysaccharides creating networks that is an obstacle for extraction, direct extraction of different wood components in high yield is not an easy matter. One potential approach to overcome such obstacles is to treat the wood with specific enzymes that degrade the networks by specific catalysis. However, the structure of wood is so compact that the penetration of the wood fibers by large enzyme molecules is hindered. Thus, the pretreatment of wood prior to the application of enzymes is necessary, for “opening” the structure.One pretreatment method that was performed in this thesis is based on kraft pulping, which is a well-established and industrialized technique. For untreated wood, the wood fibers cannot be attacked by the enzymes. A relatively mild pretreatment was sufficient for wood polysaccharides hydrolyzed by a culture filtrate. A methanol-alkali mixture extraction was subsequently applied to the samples that were pretreated with two types of hemicellulases, Gamanase and Pulpzyme HC, respectively. The extraction yield increased after enzymatic treatment, and the polymers that were extracted from monocomponent enzyme-treated wood had a higher degree of polymerization. Experiments with in vitro prepared lignin polysaccharide networks suggested that the increased extraction was due to the enzymatic untying. However, the relatively large loss of hemicellulose, particularly including (galacto)glucomannan (GGM), represents a problem with this technique. To improve the carbohydrate yield, sodium borohydride (NaBH4), polysulfide and anthraquinone were used, which increased the yields from 76.6% to 89.6%, 81.3% and 80.0%, respectively, after extended impregnation (EI). The additives also increased the extraction yield from approximately 9 to 12% w/w wood. Gamanase treatment prior to the extraction increased the extraction yield to 14% w/w wood.Sodium dithionite (Na2S2O4) is an alternative reducing agent for the preservation of hemicelluloses because it is less expensive than metal hydrides and only contains sodium and sulfur, which will not introduce new elements to the recovery system. Moreover, Na2S2O4has the potential to be generated from black liquor. Na2S2O4 has some preservation effect on hemicelluloses, and the presence of Na2S2O4 also contributed to delignification. The extraction yield increased to approximately 15% w/w wood. Furthermore, Na2S2O4 has been applied in the kraft pulping process of spruce. The yield and viscosity increased, while the Klason lignin content and kappa number decreased, which represents a beneficial characteristic for kraft pulp. The brightness and tensile strength of the resulting sheets also improved. However, the direct addition of Na2S2O4 to white liquor led to greater reject content. This problem was solved by pre-impregnation with Na2S2O4 and/or mild steam explosion (STEX) prior to the kraft pulping process. Following Na2S2O4 pre-impregnation and mild STEX, the obtained kraft pulp had substantially better properties compared with the properties exhibited after direct addition of Na2S2O4 to the white liquor.The wood structure opening efficiency of mild STEX alone was also tested. The accessibility of the wood structure to enzymes was obtained even at very modest STEX conditions, according to a reducing sugar analysis, and was not observed in untreated wood chips, which were used as a reference. The mechanical effect of STEX appears to be of great importance at lower temperatures, and both chemical and mechanical effects occur at higher STEX temperatures.
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| 8. |
- Antonsson, Stefan, et al.
(författare)
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Low Mw-lignin fractions together with vegetable oils as available oligomers for novel paper-coating applications as hydrophobic barrier
- 2008
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Ingår i: Industrial crops and products (Print). - : Elsevier BV. - 0926-6690 .- 1872-633X. ; 27:1, s. 98-103
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Tidskriftsartikel (refereegranskat)abstract
- Lignin residues are available in large amounts as kraft lignin from chemical pulping processes. This lignin is mainly incinerated in recovery boilers. The recovery boilers are often the bottle-necks in the overall pulping process when pulp production increases are desired. Through cross-flow nano-filtration of the black liquor from kraft pulping, a low-molecular weight lignin fraction can be removed thus decreasing the organic load on the recovery boilers. The low-molecular weight lignin fraction furthermore exhibit different characteristics compared to other commercial kraft lignins and represents a new raw material source in novel applications. The low-molecular weight lignin was used together with a vegetable oil to produce a new hydrophobic lignin derivative similar to suberin. The lignin and the lignin derivative was analysed with FT-IR, UV-vis and SEC. The ability of the product to make paper surfaces hydrophobic was also evaluated. The results demonstrate the possibility to make a suberin-like lignin derivative that is potentially of interest in paper-coating applications due to its capability to interact well with wood fibres and make paper hydrophobic.
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| 9. |
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| 10. |
- Kallas, Åsa M., et al.
(författare)
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Enzymatic properties of native and deglycosylated hybrid aspen (Populus tremula x tremuloides) xyloglucan endotransglycosylase 16A expressed in Pichia pastoris
- 2005
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Ingår i: Biochemical Journal. - 0264-6021. ; 390, s. 105-113
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Tidskriftsartikel (refereegranskat)abstract
- The cDNA encoding a xyloglucan endotransglycosylase, PttXET16A, from hybrid aspen (Populus tremula x tremuloides) has been isolated from an expressed sequence tag library and expressed in the methylotrophic yeast Pichia pastoris. Sequence analysis indicated a high degree of similarity with other proteins in the XTH (xyloglucan transglycosylase/hydrolase) gene subfamily of GH16 (glycoside hydrolase family 16). In addition to the conserved GH16 catalytic sequence motif, PttXET16A contains a conserved N-glycosylation site situated proximal to the predicted catalytic residues. MS analysis indicated that the recombinant PttXET16A expressed in P. pastoris is heterogeneous due to the presence of variable N-glycosylation and incomplete cleavage of the a-factor secretion signal peptide. Removal of the N-glycan by endoglycosidase H treatment did not influence the catalytic activity significantly. Similarly, site-directed mutagenesis of Asn(93) to serine to remove the N-glycosylation site resulted in an enzyme which was comparable with the wild-type enzyme in specific activity and thermal stability but had clearly reduced solubility. Hydrolytic activity was detected neither in wild-type PttXET16A before or after enzymatic deglycosylation nor in PttXET16A N93S (Asn(93) -> Ser) mutant.
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