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The Norway spruce g...
The Norway spruce genome sequence and conifer genome evolution
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- Nystedt, Björn (author)
- Stockholms universitet,Institutionen för biokemi och biofysik,Science for Life Laboratory (SciLifeLab)
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- Street, Nathaniel Robert (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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Wetterbom, Anna (author)
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show more...
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Zuccolo, Andrea (author)
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Lin, Yao-Cheng (author)
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- Scofield, Douglas G. (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC),Institutionen för ekologi, miljö och geovetenskap
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- Vezzi, Francesco (author)
- KTH,Beräkningsbiologi, CB,Science for Life Laboratory, SciLifeLab
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- Delhomme, Nicolas (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC),Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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Giacomello, Stefania (author)
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- Alekseenko, Andrey (author)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
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Vicedomini, Riccardo (author)
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- Sahlin, Kristoffer (author)
- KTH,Beräkningsbiologi, CB,Science for Life Laboratory, SciLifeLab
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- Sherwood, Ellen (author)
- Stockholms universitet,Institutionen för biokemi och biofysik,Science for Life Laboratory (SciLifeLab)
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- Elfstrand, Malin (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Department of Forest Mycology and Plant Pathology
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Gramzow, Lydia (author)
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Holmberg, Kristina (author)
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- Hällman, Jimmie (author)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
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- Keech, Olivier (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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- Klasson, Lisa (author)
- Uppsala universitet,Molekylär evolution
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Koriabine, Maxim (author)
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- Kucukoglu, Melis (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Käller, Max (author)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
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Luthman, Johannes (author)
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Lysholm, Fredrik (author)
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- Niittylä, Totte (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Olson, Åke (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Department of Forest Mycology and Plant Pathology
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- Rilakovic, Nemanja (author)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
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Ritland, Carol (author)
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Rosselló, Josep A. (author)
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Sena, Juliana (author)
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- Svensson, Thomas (author)
- Karolinska Institutet
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Talavera-López, Carlos (author)
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Theißen, Günter (author)
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- Tuominen, Hannele (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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Vanneste, Kevin (author)
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- Wu, Zhi-Qiang (author)
- Umeå universitet,Institutionen för ekologi, miljö och geovetenskap,Umeå Plant Science Centre (UPSC)
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- Zhang, Bo (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC),Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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Zerbe, Philipp (author)
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- Arvestad, Lars (author)
- Stockholms universitet,KTH,Beräkningsbiologi, CB,Science for Life Laboratory, SciLifeLab,Numerisk analys och datalogi (NADA)
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- Bhalerao, Rishikesh P. (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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Bohlmann, Joerg (author)
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Bousquet, Jean (author)
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- Garcia Gil, Rosario (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Hvidsten, Torgeir R. (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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de Jong, Pieter (author)
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MacKay, John (author)
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Morgante, Michele (author)
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Ritland, Kermit (author)
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- Sundberg, Björn (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Thompson, Stacey Lee (author)
- Umeå universitet,Institutionen för ekologi, miljö och geovetenskap,Umeå Plant Science Centre (UPSC)
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Van de Peer, Yves (author)
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- Andersson, Björn (author)
- Karolinska Institutet
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- Nilsson, Ove (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Ingvarsson, Pär K. (author)
- Umeå universitet,Institutionen för ekologi, miljö och geovetenskap,Umeå Plant Science Centre (UPSC),Arcum,Umeå University
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- Lundeberg, Joakim (author)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab
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- Jansson, Stefan (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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(creator_code:org_t)
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- 2013-05-22
- 2013
- English.
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In: Nature. - : Nature Publishing Group. - 0028-0836 .- 1476-4687. ; 497:7451, s. 579-584
- Related links:
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https://www.nature.c...
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https://uu.diva-port... (primary) (Raw object)
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https://doi.org/10.1...
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https://urn.kb.se/re...
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https://doi.org/10.1...
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https://urn.kb.se/re...
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http://kipublication...
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https://res.slu.se/i...
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https://urn.kb.se/re...
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https://urn.kb.se/re...
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Abstract
Subject headings
Close
- Conifers have dominated forests for more than 200 million years and are of huge ecological and economic importance. Here we present the draft assembly of the 20-gigabase genome of Norway spruce (Picea abies), the first available for any gymnosperm. The number of well-supported genes (28,354) is similar to the >100 times smaller genome of Arabidopsis thaliana, and there is no evidence of a recent whole-genome duplication in the gymnosperm lineage. Instead, the large genome size seems to result from the slow and steady accumulation of a diverse set of long-terminal repeat transposable elements, possibly owing to the lack of an efficient elimination mechanism. Comparative sequencing of Pinus sylvestris, Abies sibirica, Juniperus communis, Taxus baccata and Gnetum gnemon reveals that the transposable element diversity is shared among extant conifers. Expression of 24-nucleotide small RNAs, previously implicated in transposable element silencing, is tissue-specific and much lower than in other plants. We further identify numerous long (>10,000 base pairs) introns, gene-like fragments, uncharacterized long non-coding RNAs and short RNAs. This opens up new genomic avenues for conifer forestry and breeding.
Subject headings
- NATURVETENSKAP -- Geovetenskap och miljövetenskap (hsv//swe)
- NATURAL SCIENCES -- Earth and Related Environmental Sciences (hsv//eng)
- NATURVETENSKAP -- Biologi -- Botanik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Botany (hsv//eng)
- NATURVETENSKAP -- Biologi -- Evolutionsbiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Evolutionary Biology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Genetik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Genetics (hsv//eng)
- NATURVETENSKAP -- Biologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences (hsv//eng)
Keyword
- Plant sciences
Publication and Content Type
- ref (subject category)
- art (subject category)
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Nature
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To the university's database
- By the author/editor
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Nystedt, Björn
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Street, Nathanie ...
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Wetterbom, Anna
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Zuccolo, Andrea
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Lin, Yao-Cheng
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Scofield, Dougla ...
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show more...
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Vezzi, Francesco
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Delhomme, Nicola ...
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Giacomello, Stef ...
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Alekseenko, Andr ...
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Vicedomini, Ricc ...
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Sahlin, Kristoff ...
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Sherwood, Ellen
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Elfstrand, Malin
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Gramzow, Lydia
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Holmberg, Kristi ...
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Hällman, Jimmie
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Keech, Olivier
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Klasson, Lisa
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Koriabine, Maxim
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Kucukoglu, Melis
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Käller, Max
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Luthman, Johanne ...
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Lysholm, Fredrik
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Niittylä, Totte
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Olson, Åke
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Rilakovic, Neman ...
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Ritland, Carol
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Rosselló, Josep ...
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Sena, Juliana
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Svensson, Thomas
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Talavera-López, ...
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Theißen, Günter
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Tuominen, Hannel ...
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Vanneste, Kevin
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Wu, Zhi-Qiang
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Zhang, Bo
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Zerbe, Philipp
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Arvestad, Lars
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Bhalerao, Rishik ...
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Bohlmann, Joerg
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Bousquet, Jean
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Garcia Gil, Rosa ...
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Hvidsten, Torgei ...
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de Jong, Pieter
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MacKay, John
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Morgante, Michel ...
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Ritland, Kermit
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Sundberg, Björn
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Thompson, Stacey ...
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Van de Peer, Yve ...
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Andersson, Björn
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Nilsson, Ove
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Ingvarsson, Pär ...
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Lundeberg, Joaki ...
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Jansson, Stefan
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show less...
- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Earth and Relate ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Botany
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Evolutionary Bio ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Genetics
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
- Articles in the publication
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Nature
- By the university
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Umeå University
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Royal Institute of Technology
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Karolinska Institutet
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Swedish University of Agricultural Sciences
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Uppsala University
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Stockholm University