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Supporting the Development of Biobanks in Low and Medium Income Countries

Klingström, Tomas (author)
Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för husdjursgenetik (HGEN),Department of Animal Breeding and Genetics,SLU-Global Bioinformatics Centre, Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden
Mendy, Maimuna (author)
Int Agcy Res Canc, Lyon, France.,Dominique Meunier International Agency for Research on Cancer, Lyon, France
Meunier, Dominique (author)
Int Agcy Res Canc, Lyon, France.,International Agency for Research on Cancer, Lyon, France
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Berger, Anouk (author)
Int Agcy Res Canc, Lyon, France.,International Agency for Research on Cancer, Lyon, France
Reichel, Jane (author)
Uppsala universitet,Juridiska institutionen,Centrum för forsknings- och bioetik,Juridiska fakulteten
Christoffels, Alan (author)
Univ Western Cape, South African Natl Bioinformat Inst, Bellville, South Africa.,South African National Bioinformatics Institute University of the Western Cape, Bellville, South Africa
Bendou, Hocine (author)
Univ Western Cape, South African Natl Bioinformat Inst, Bellville, South Africa.,South African National Bioinformatics Institute, University of the Western Cape, Bellville, South Africa
Swanepoel, Carmen (author)
South African National Bioinformatics Institute, University of the Western Cape, Bellville, South Africa
Smit, Lemoene (author)
BikaLabs, Western Cape, South Africa.
Mckellar-Basset, Campbell (author)
BikaLabs, Western Cape, South Africa.
Bongcam Rudloff, Erik (author)
Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för husdjursgenetik (HGEN),Department of Animal Breeding and Genetics,SLU-Global Bioinformatics Centre, Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden
Söderberg, Jonas (author)
Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Department of Animal Breeding and Genetics, SLU Biobank,SLU-Global Bioinformatics Centre, Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden
Merino-Martinez, Roxana (author)
Karolinska Inst, Med Epidemiol & Biostat, Stockholm, Sweden.,Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
Amatya, Suyesh (author)
Karolinska Inst, Med Epidemiol & Biostat, Stockholm, Sweden.,Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
Kihara, Absolomon (author)
Int Livestock Res Inst, Nairobi, Kenya.,International Livestock Research Institute, Nairobi, Kenya
Kemp, Steve (author)
Int Livestock Res Inst, Nairobi, Kenya.,International Livestock Research Institute, Nairobi, Kenya
Reihs, Robert (author)
Inst Pathol, Med Res Ctr, Graz, Austria.,Institute for Pathology / Center for Medical Research, Graz, Austria
Mueller, Heimo (author)
Inst Pathol, Med Res Ctr, Graz, Austria.,Institute for Pathology / Center for Medical Research, Graz, Austria
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 (creator_code:org_t)
 
2016
2016
English.
In: 2016 IST-AFRICA WEEK CONFERENCE. - 9781905824557
  • Conference paper (peer-reviewed)
Abstract Subject headings
Close  
  • Biobanks are an organized collection of biological material and associated data. They are a fundamental resource for life science research and contribute to the development of pharmaceutical drugs, diagnostic markers and to a deeper understanding of the genetics that regulate the development of all life on earth. Biobanks are well established in High Income Countries (HIC) and are rapidly emerging in Low and Middle Income Countries (LMIC). Surveys among biobanks operating in a LMIC setting indicate that limited resources and short term funding tied to specific projects threaten the sustainability of the biobanks. Fit-for-purpose biobanks targeting major societal challenges such as HIV and Malaria provide an excellent basis for integrating biobanks with the available research communities in LMIC regions. But to become sustainable for the future it is important that biobanks become an integrated part of local research communities. To achieve this, the cost of operating biobanks must be lowered, templates must be developed to support local ethics committees and researchers must be given the opportunity to build experience in successfully operating biobank based research projects. The B3Africa consortium is based on these conclusions and set up to support biobank based research by creating a cost efficient Laboratory Information Management System (LIMS) for developing biobanks and also contribute to the training and capacity building in the local research community. The technical platform called the eB3Kit is open source and consists of a LIMS and a bioinformatics module based on the eBiokit that allow researchers to take control over the analysis of their own data. Along with the technical platform the consortium will also contribute training and support for the associated infrastructures necessary to regulate the ethical and legal implications of biobank based research.

Subject headings

MEDICIN OCH HÄLSOVETENSKAP  -- Hälsovetenskap -- Medicinsk etik (hsv//swe)
MEDICAL AND HEALTH SCIENCES  -- Health Sciences -- Medical Ethics (hsv//eng)
TEKNIK OCH TEKNOLOGIER  -- Miljöbioteknik -- Bioteknisk etik (hsv//swe)
ENGINEERING AND TECHNOLOGY  -- Environmental Biotechnology -- Bioethics (hsv//eng)
NATURVETENSKAP  -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
NATURVETENSKAP  -- Biologi -- Genetik (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Genetics (hsv//eng)
NATURVETENSKAP  -- Data- och informationsvetenskap -- Bioinformatik (hsv//swe)
NATURAL SCIENCES  -- Computer and Information Sciences -- Bioinformatics (hsv//eng)

Keyword

biobank
low-and medium-income countries
biobank and cohort building
eInfrastructure
open source open source software
ethical
legal and social issues
bioinformatics
Bioinformatik

Publication and Content Type

ref (subject category)
kon (subject category)

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