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Parallell interacting MCMC for learning of topologies of graphical models

Corander, Jukka (author)
Department of Mathematics, Åbo Akademi University, Åbo, Finland
Ekdahl, Magnus (author)
Linköpings universitet,Matematisk statistik,Tekniska högskolan
Koski, Timo (author)
KTH,Matematisk statistik,Department of Mathematics, Royal Institute of Technology, Stockholm, Sweden
 (creator_code:org_t)
2008-05-16
2008
English.
In: Data mining and knowledge discovery. - : Springer Science and Business Media LLC. - 1384-5810 .- 1573-756X. ; 17:3, s. 431-456
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • Automated statistical learning of graphical models from data has attained a considerable degree of interest in the machine learning and related literature. Many authors have discussed and/or demonstrated the need for consistent stochastic search methods that would not be as prone to yield locally optimal model structures as simple greedy methods. However, at the same time most of the stochastic search methods are based on a standard Metropolis-Hastings theory that necessitates the use of relatively simple random proposals and prevents the utilization of intelligent and efficient search operators. Here we derive an algorithm for learning topologies of graphical models from samples of a finite set of discrete variables by utilizing and further enhancing a recently introduced theory for non-reversible parallel interacting Markov chain Monte Carlo-style computation. In particular, we illustrate how the non-reversible approach allows for novel type of creativity in the design of search operators. Also, the parallel aspect of our method illustrates well the advantages of the adaptive nature of search operators to avoid trapping states in the vicinity of locally optimal network topologies.

Subject headings

NATURVETENSKAP  -- Matematik (hsv//swe)
NATURAL SCIENCES  -- Mathematics (hsv//eng)

Keyword

MCMC
Equivalence search
Learning graphical models
chain monte-carlo
markov equivalence classes
efficient estimation
bayesian networks
acyclic digraphs
selection
MATHEMATICS

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ref (subject category)
art (subject category)

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Corander, Jukka
Ekdahl, Magnus
Koski, Timo
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NATURAL SCIENCES
NATURAL SCIENCES
and Mathematics
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Data mining and ...
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Royal Institute of Technology
Linköping University

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