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Genome-wide associa...
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Schafmayer, Clemens
(author)
Genome-wide association analysis of diverticular disease points towards neuromuscular, connective tissue and epithelial pathomechanisms
- Article/chapterEnglish2019
Publisher, publication year, extent ...
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2019-01-19
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BMJ,2019
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printrdacarrier
Numbers
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LIBRIS-ID:oai:DiVA.org:su-171174
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https://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-171174URI
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https://doi.org/10.1136/gutjnl-2018-317619DOI
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http://kipublications.ki.se/Default.aspx?queryparsed=id:141197628URI
Supplementary language notes
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Language:English
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Summary in:English
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Subject category:ref swepub-contenttype
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Subject category:art swepub-publicationtype
Notes
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Objective Diverticular disease is a common complex disorder characterised by mucosal outpouchings of the colonic wall that manifests through complications such as diverticulitis, perforation and bleeding. We report the to date largest genome-wide association study (GWAS) to identify genetic risk factors for diverticular disease. Design Discovery GWAS analysis was performed on UK Biobank imputed genotypes using 31 964 cases and 419 135 controls of European descent. Associations were replicated in a European sample of 3893 cases and 2829 diverticula-free controls and evaluated for risk contribution to diverticulitis and uncomplicated diverticulosis. Transcripts at top 20 replicating loci were analysed by real-time quatitative PCR in preparations of the mucosal, submucosal and muscular layer of colon. The localisation of expressed protein at selected loci was investigated by immunohistochemistry. Results We discovered 48 risk loci, of which 12 are novel, with genome-wide significance and consistent OR in the replication sample. Nominal replication (p< 0.05) was observed for 27 loci, and additional 8 in meta-analysis with a population-based cohort. The most significant novel risk variant rs9960286 is located near CTAGE1 with a p value of 2.3x10-10 and 0.002 (OR allelic = 1.14 (95% CI 1.05 to 1.24)) in the replication analysis. Four loci showed stronger effects for diverticulitis, PHGR1 (OR 1.32, 95% CI 1.12 to 1.56), FAM155A-2 (OR 1.21, 95% CI 1.04 to 1.42), CALCB (OR 1.17, 95% CI 1.03 to 1.33) and S100A10 (OR 1.17, 95% CI 1.03 to 1.33). Conclusion I n silico analyses point to diverticulosis primarily as a disorder of intestinal neuromuscular function and of impaired connective fibre support, while an additional diverticulitis risk might be conferred by epithelial dysfunction.
Subject headings and genre
Added entries (persons, corporate bodies, meetings, titles ...)
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Harrison, James William
(author)
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Buch, Stephan
(author)
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Lange, ChristinaKarolinska Institutet
(author)
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Reichert, Matthias C.
(author)
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Hofer, Philipp
(author)
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Cossais, François
(author)
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Kupcinskas, Juozas
(author)
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von Schönfels, Witigo
(author)
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Schniewind, Bodo
(author)
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Kruis, Wolfgang
(author)
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Tepel, Jürgen
(author)
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Zobel, Myrko
(author)
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Rosendahl, Jonas
(author)
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Jacobi, Thorsten
(author)
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Walther-Berends, Andreas
(author)
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Schroeder, Michael
(author)
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Vogel, Ilka
(author)
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Sergeev, Petr
(author)
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Boedeker, Hans
(author)
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Hinrichsen, Holger
(author)
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Volk, Andreas
(author)
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Erk, Jens-Uwe
(author)
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Burmeister, Greta
(author)
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Hendricks, Alexander
(author)
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Hinz, Sebastian
(author)
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Wolff, Sebastian
(author)
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Böttner, Martina
(author)
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Wood, Andrew R.
(author)
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Tyrrell, Jessica
(author)
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Beaumont, Robin N.
(author)
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Langheinrich, Melanie
(author)
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Kucharzik, Torsten
(author)
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Brezina, Stefanie
(author)
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Huber-Schönauer, Ursula
(author)
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Pietsch, Leonora
(author)
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Noack, Laura Sophie
(author)
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Brosch, Mario
(author)
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Herrmann, Alexander
(author)
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Thangapandi, Raghavan Veera
(author)
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Schimming, Hans Wolfgang
(author)
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Zeissig, Sebastian
(author)
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Palm, Stefan
(author)
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Focke, Gerd
(author)
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Andreasson, AnnaStockholms universitet,Stressforskningsinstitutet,Karolinska Institutet, Sweden(Swepub:su)anan6088
(author)
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Schmidt, Peter T.Karolinska Institutet
(author)
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Weitz, Juergen
(author)
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Krawczak, Michael
(author)
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Völzke, Henry
(author)
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Leeb, Gernot
(author)
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Michl, Patrick
(author)
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Lieb, Wolfgang
(author)
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Grützmann, Robert
(author)
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Franke, Andre
(author)
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Lammert, Frank
(author)
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Becker, Thomas
(author)
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Kupcinskas, Limas
(author)
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D'Amato, MauroKarolinska Institutet
(author)
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Wedel, Thilo
(author)
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Datz, Christian
(author)
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Gsur, Andrea
(author)
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Weedon, Michael N.
(author)
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Hampe, Jochen
(author)
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Karolinska InstitutetStressforskningsinstitutet
(creator_code:org_t)
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In:Gut: BMJ68:5, s. 854-8650017-57491468-3288
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Harrison, James ...
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Buch, Stephan
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Lange, Christina
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Reichert, Matthi ...
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Hofer, Philipp
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Cossais, Françoi ...
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Kupcinskas, Juoz ...
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von Schönfels, W ...
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Schniewind, Bodo
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Kruis, Wolfgang
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Tepel, Jürgen
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Zobel, Myrko
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Rosendahl, Jonas
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Jacobi, Thorsten
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Walther-Berends, ...
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Schroeder, Micha ...
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Vogel, Ilka
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Sergeev, Petr
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Boedeker, Hans
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Hinrichsen, Holg ...
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Volk, Andreas
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Erk, Jens-Uwe
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Burmeister, Gret ...
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Hendricks, Alexa ...
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Hinz, Sebastian
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Wolff, Sebastian
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Böttner, Martina
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Wood, Andrew R.
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Tyrrell, Jessica
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Beaumont, Robin ...
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Langheinrich, Me ...
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Kucharzik, Torst ...
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Brezina, Stefani ...
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Huber-Schönauer, ...
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Pietsch, Leonora
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Noack, Laura Sop ...
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Brosch, Mario
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Herrmann, Alexan ...
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Thangapandi, Rag ...
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Schimming, Hans ...
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Zeissig, Sebasti ...
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Palm, Stefan
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Focke, Gerd
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Andreasson, Anna
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Schmidt, Peter T ...
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Weitz, Juergen
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Krawczak, Michae ...
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Völzke, Henry
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Leeb, Gernot
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Michl, Patrick
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Lieb, Wolfgang
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Grützmann, Rober ...
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Franke, Andre
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Lammert, Frank
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Becker, Thomas
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Kupcinskas, Lima ...
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D'Amato, Mauro
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Wedel, Thilo
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Datz, Christian
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Gsur, Andrea
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Weedon, Michael ...
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Hampe, Jochen
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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Stockholm University
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Karolinska Institutet