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Sequence and compar...
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
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Hillier, Ladeana W (author)
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Miller, Webb (author)
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Birney, Ewan (author)
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show more...
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Warren, Wesley (author)
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Hardison, Ross C (author)
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Ponting, Chris P (author)
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Bork, Peer (author)
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Burt, David W (author)
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Groenen, Martien A M (author)
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Delany, Mary E (author)
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Dodgson, Jerry B (author)
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Chinwalla, Asif T (author)
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Cliften, Paul F (author)
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Clifton, Sandra W (author)
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Delehaunty, Kimberly D (author)
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Fronick, Catrina (author)
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Fulton, Robert S (author)
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Graves, Tina A (author)
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Kremitzki, Colin (author)
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Layman, Dan (author)
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Magrini, Vincent (author)
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McPherson, John D (author)
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Miner, Tracie L (author)
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Minx, Patrick (author)
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Nash, William E (author)
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Nhan, Michael N (author)
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Nelson, Joanne O (author)
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Oddy, Lachlan G (author)
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Pohl, Craig S (author)
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Randall-Maher, Jennifer (author)
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Smith, Scott M (author)
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Wallis, John W (author)
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Yang, Shiaw-Pyng (author)
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Romanov, Michael N (author)
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Rondelli, Catherine M (author)
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Paton, Bob (author)
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Smith, Jacqueline (author)
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Morrice, David (author)
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Daniels, Laura (author)
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Tempest, Helen G (author)
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Robertson, Lindsay (author)
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Masabanda, Julio S (author)
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Griffin, Darren K (author)
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Vignal, Alain (author)
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Fillon, Valerie (author)
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- Jacobbson, Lina (author)
- Uppsala universitet,Institutionen för medicinsk biokemi och mikrobiologi
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- Kerje, Susanne (author)
- Uppsala universitet,Institutionen för medicinsk biokemi och mikrobiologi
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- Andersson, Leif (author)
- Uppsala universitet,Institutionen för medicinsk biokemi och mikrobiologi
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Crooijmans, Richard P M (author)
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Aerts, Jan (author)
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van der Poel, Jan J (author)
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- Ellegren, Hans (author)
- Uppsala universitet,Institutionen för evolution, genomik och systematik,Evolutionsbiologi
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Caldwell, Randolph B (author)
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Hubbard, Simon J (author)
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Grafham, Darren V (author)
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Kierzek, Andrzej M (author)
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McLaren, Stuart R (author)
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Overton, Ian M (author)
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Arakawa, Hiroshi (author)
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Beattie, Kevin J (author)
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Bezzubov, Yuri (author)
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Boardman, Paul E (author)
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Bonfield, James K (author)
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Croning, Michael D R (author)
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Davies, Robert M (author)
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Francis, Matthew D (author)
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Humphray, Sean J (author)
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Scott, Carol E (author)
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Taylor, Ruth G (author)
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Tickle, Cheryll (author)
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Brown, William R A (author)
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Rogers, Jane (author)
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Buerstedde, Jean-Marie (author)
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Wilson, Stuart A (author)
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Stubbs, Lisa (author)
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Ovcharenko, Ivan (author)
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Gordon, Laurie (author)
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Lucas, Susan (author)
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Miller, Marcia M (author)
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Inoko, Hidetoshi (author)
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Shiina, Takashi (author)
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Kaufman, Jim (author)
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Salomonsen, Jan (author)
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Skjoedt, Karsten (author)
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Wong, Gane Ka-Shu (author)
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Wang, Jun (author)
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Liu, Bin (author)
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Wang, Jian (author)
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Yu, Jun (author)
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Yang, Huanming (author)
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Nefedov, Mikhail (author)
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Koriabine, Maxim (author)
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Dejong, Pieter J (author)
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Goodstadt, Leo (author)
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Webber, Caleb (author)
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Dickens, Nicholas J (author)
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Letunic, Ivica (author)
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Suyama, Mikita (author)
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Torrents, David (author)
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von Mering, Christian (author)
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Zdobnov, Evgeny M (author)
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Makova, Kateryna (author)
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Nekrutenko, Anton (author)
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Elnitski, Laura (author)
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Eswara, Pallavi (author)
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King, David C (author)
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Yang, Shan (author)
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Tyekucheva, Svitlana (author)
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Radakrishnan, Anusha (author)
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Harris, Robert S (author)
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Chiaromonte, Francesca (author)
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Taylor, James (author)
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He, Jianbin (author)
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Rijnkels, Monique (author)
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Griffiths-Jones, Sam (author)
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Ureta-Vidal, Abel (author)
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Hoffman, Michael M (author)
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Severin, Jessica (author)
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Searle, Stephen M J (author)
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Law, Andy S (author)
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Speed, David (author)
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Waddington, Dave (author)
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Cheng, Ze (author)
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Tuzun, Eray (author)
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Eichler, Evan (author)
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Bao, Zhirong (author)
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Flicek, Paul (author)
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Shteynberg, David D (author)
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Brent, Michael R (author)
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Bye, Jacqueline M (author)
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Huckle, Elizabeth J (author)
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Chatterji, Sourav (author)
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Dewey, Colin (author)
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Pachter, Lior (author)
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Kouranov, Andrei (author)
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Mourelatos, Zissimos (author)
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Hatzigeorgiou, Artemis G (author)
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Paterson, Andrew H (author)
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Ivarie, Robert (author)
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- Brandström, Mikael (author)
- Uppsala universitet,Evolutionsbiologi,Molecular Evolution
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- Axelsson, Erik (author)
- Molecular Evolution
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- Backström, Niclas (author)
- Uppsala universitet,Evolutionsbiologi,Molecular Evolution
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- Berlin, Sofia (author)
- Uppsala universitet,Evolutionsbiologi,Molecular Evolution
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- Webster, Matthew T (author)
- Uppsala universitet,Evolutionsbiologi,Molecular Evolution
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Pourquie, Olivier (author)
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Reymond, Alexandre (author)
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Ucla, Catherine (author)
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Antonarakis, Stylianos E (author)
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Long, Manyuan (author)
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Emerson, J J (author)
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Betrán, Esther (author)
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Dupanloup, Isabelle (author)
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Kaessmann, Henrik (author)
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Hinrichs, Angie S (author)
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Bejerano, Gill (author)
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Furey, Terrence S (author)
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Harte, Rachel A (author)
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Raney, Brian (author)
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- Siepel, Adam (author)
- Uppsala universitet,Institutionen för medicinsk biokemi och mikrobiologi
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Kent, W James (author)
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Haussler, David (author)
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Eyras, Eduardo (author)
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Castelo, Robert (author)
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Abril, Josep F (author)
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Castellano, Sergi (author)
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Camara, Francisco (author)
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Parra, Genis (author)
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Guigo, Roderic (author)
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Bourque, Guillaume (author)
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Tesler, Glenn (author)
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Pevzner, Pavel A (author)
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Smit, Arian (author)
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Fulton, Lucinda A (author)
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Mardis, Elaine R (author)
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Wilson, Richard K (author)
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(creator_code:org_t)
- 2004
- 2004
- English.
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In: Nature. - 0028-0836 .- 1476-4687. ; 432:7018, s. 695-716
- Related links:
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http://www.ncbi.nlm....
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https://urn.kb.se/re...
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Abstract
Subject headings
Close
- We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to have its genome sequenced, the draft sequence of its genome--composed of approximately one billion base pairs of sequence and an estimated 20,000-23,000 genes--provides a new perspective on vertebrate genome evolution, while also improving the annotation of mammalian genomes. For example, the evolutionary distance between chicken and human provides high specificity in detecting functional elements, both non-coding and coding. Notably, many conserved non-coding sequences are far from genes and cannot be assigned to defined functional classes. In coding regions the evolutionary dynamics of protein domains and orthologous groups illustrate processes that distinguish the lineages leading to birds and mammals. The distinctive properties of avian microchromosomes, together with the inferred patterns of conserved synteny, provide additional insights into vertebrate chromosome architecture.
Subject headings
- NATURVETENSKAP -- Biologi -- Genetik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Genetics (hsv//eng)
Keyword
- Animals
- Avian Proteins/genetics
- Chickens/*genetics
- Comparative Study
- Conserved Sequence/genetics
- DNA Transposable Elements/genetics
- Evolution; Molecular
- Gene Duplication
- Genes/genetics
- Genome
- Genomics
- Humans
- Long Interspersed Nucleotide Elements/genetics
- Multigene Family/genetics
- Mutagenesis/genetics
- Physical Chromosome Mapping
- Pseudogenes/genetics
- RNA; Untranslated/genetics
- Research Support; Non-U.S. Gov't
- Research Support; U.S. Gov't; Non-P.H.S.
- Research Support; U.S. Gov't; P.H.S.
- Retroviridae/genetics
- Sequence Analysis; DNA
- Short Interspersed Nucleotide Elements/genetics
- Synteny
- Vertebrates/genetics
- Genetics
- Genetik
Publication and Content Type
- ref (subject category)
- art (subject category)
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Nature
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Hillier, Ladeana ...
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Miller, Webb
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Birney, Ewan
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Warren, Wesley
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Hardison, Ross C
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Ponting, Chris P
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show more...
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Bork, Peer
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Burt, David W
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Groenen, Martien ...
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Delany, Mary E
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Dodgson, Jerry B
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Chinwalla, Asif ...
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Cliften, Paul F
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Clifton, Sandra ...
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Delehaunty, Kimb ...
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Fronick, Catrina
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Fulton, Robert S
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Graves, Tina A
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Kremitzki, Colin
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Layman, Dan
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Magrini, Vincent
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McPherson, John ...
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Miner, Tracie L
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Minx, Patrick
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Nash, William E
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Nhan, Michael N
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Nelson, Joanne O
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Oddy, Lachlan G
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Pohl, Craig S
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Randall-Maher, J ...
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Smith, Scott M
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Wallis, John W
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Yang, Shiaw-Pyng
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Romanov, Michael ...
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Rondelli, Cather ...
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Paton, Bob
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Smith, Jacquelin ...
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Morrice, David
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Daniels, Laura
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Tempest, Helen G
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Robertson, Linds ...
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Masabanda, Julio ...
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Griffin, Darren ...
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Vignal, Alain
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Fillon, Valerie
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Jacobbson, Lina
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Kerje, Susanne
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Andersson, Leif
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Crooijmans, Rich ...
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Aerts, Jan
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van der Poel, Ja ...
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Ellegren, Hans
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Caldwell, Randol ...
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Hubbard, Simon J
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Grafham, Darren ...
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Kierzek, Andrzej ...
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McLaren, Stuart ...
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Overton, Ian M
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Arakawa, Hiroshi
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Beattie, Kevin J
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Bezzubov, Yuri
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Boardman, Paul E
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Bonfield, James ...
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Croning, Michael ...
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Davies, Robert M
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Francis, Matthew ...
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Humphray, Sean J
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Scott, Carol E
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Taylor, Ruth G
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Tickle, Cheryll
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Brown, William R ...
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Rogers, Jane
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Buerstedde, Jean ...
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Wilson, Stuart A
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Stubbs, Lisa
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Ovcharenko, Ivan
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Gordon, Laurie
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Lucas, Susan
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Miller, Marcia M
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Inoko, Hidetoshi
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Shiina, Takashi
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Kaufman, Jim
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Salomonsen, Jan
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Skjoedt, Karsten
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Wong, Gane Ka-Sh ...
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Wang, Jun
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Liu, Bin
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Wang, Jian
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Yu, Jun
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Yang, Huanming
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Nefedov, Mikhail
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Koriabine, Maxim
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Dejong, Pieter J
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Goodstadt, Leo
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Webber, Caleb
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Dickens, Nichola ...
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Letunic, Ivica
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Suyama, Mikita
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Torrents, David
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von Mering, Chri ...
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Zdobnov, Evgeny ...
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Makova, Kateryna
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Nekrutenko, Anto ...
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Elnitski, Laura
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Eswara, Pallavi
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King, David C
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Yang, Shan
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Tyekucheva, Svit ...
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Radakrishnan, An ...
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Harris, Robert S
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Chiaromonte, Fra ...
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Taylor, James
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He, Jianbin
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Rijnkels, Moniqu ...
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Griffiths-Jones, ...
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Ureta-Vidal, Abe ...
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Hoffman, Michael ...
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Severin, Jessica
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Searle, Stephen ...
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Law, Andy S
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Speed, David
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Waddington, Dave
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Cheng, Ze
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Tuzun, Eray
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Eichler, Evan
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Bao, Zhirong
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Flicek, Paul
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Shteynberg, Davi ...
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Brent, Michael R
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Bye, Jacqueline ...
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Huckle, Elizabet ...
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Chatterji, Soura ...
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Dewey, Colin
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Pachter, Lior
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Kouranov, Andrei
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Mourelatos, Ziss ...
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Hatzigeorgiou, A ...
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Paterson, Andrew ...
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Ivarie, Robert
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Brandström, Mika ...
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Axelsson, Erik
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Backström, Nicla ...
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Berlin, Sofia
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Webster, Matthew ...
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Pourquie, Olivie ...
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Reymond, Alexand ...
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Ucla, Catherine
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Antonarakis, Sty ...
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Long, Manyuan
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Emerson, J J
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Betrán, Esther
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Dupanloup, Isabe ...
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Kaessmann, Henri ...
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Hinrichs, Angie ...
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Bejerano, Gill
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Furey, Terrence ...
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Harte, Rachel A
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Raney, Brian
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Siepel, Adam
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Kent, W James
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Haussler, David
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Eyras, Eduardo
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Castelo, Robert
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Abril, Josep F
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Castellano, Serg ...
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Camara, Francisc ...
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Parra, Genis
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Guigo, Roderic
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Bourque, Guillau ...
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Tesler, Glenn
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Pevzner, Pavel A
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Smit, Arian
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Fulton, Lucinda ...
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Mardis, Elaine R
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Wilson, Richard ...
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Genetics
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Nature
- By the university
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Uppsala University