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  • Delahaye-Sourdeix, Manon (author)

The 12p13.33/RAD52 locus and genetic susceptibility to squamous cell cancers of upper aerodigestive tract

  • Article/chapterEnglish2015

Publisher, publication year, extent ...

  • 2015-03-20
  • Public library science,2015
  • printrdacarrier

Numbers

  • LIBRIS-ID:oai:DiVA.org:umu-116966
  • https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-116966URI
  • https://doi.org/10.1371/journal.pone.0117639DOI

Supplementary language notes

  • Language:English
  • Summary in:English

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Classification

  • Subject category:ref swepub-contenttype
  • Subject category:art swepub-publicationtype

Notes

  • Genetic variants located within the 12p13.33/RAD52 locus have been associated with lung squamous cell carcinoma (LUSC). Here, within 5,947 UADT cancers and 7,789 controls from 9 different studies, we found rs10849605, a common intronic variant in RAD52, to be also associated with upper aerodigestive tract (UADT) squamous cell carcinoma cases (OR = 1.09, 95% CI: 1.04-1.15, p = 6x10(-4)). We additionally identified rs10849605 as a RAD52 cis-eQTL inUADT(p = 1x10(-3)) and LUSC (p = 9x10(-4)) tumours, with the UADT/LUSC risk allele correlated with increased RAD52 expression levels. The 12p13.33 locus, encompassing rs10849605/RAD52, was identified as a significant somatic focal copy number amplification in UADT(n = 374, q-value = 0.075) and LUSC (n = 464, q-value = 0.007) tumors and correlated with higher RAD52 tumor expression levels (p = 6x10(-48) and p = 3x10(-29) in UADT and LUSC, respectively). In combination, these results implicate increased RAD52 expression in both genetic susceptibility and tumorigenesis of UADT and LUSC tumors.

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Added entries (persons, corporate bodies, meetings, titles ...)

  • Oliver, Javier (author)
  • Timofeeva, Maria N (author)
  • Gaborieau, Valérie (author)
  • Johansson, MattiasGenetic Epidemiology group (GEP), International Agency for Research on Cancer (IARC), Lyon, France(Swepub:umu)masmas97 (author)
  • Chabrier, Amélie (author)
  • Wozniak, Magdalena B (author)
  • Brenner, Darren R (author)
  • Vallée, Maxime P (author)
  • Anantharaman, Devasena (author)
  • Lagiou, Pagona (author)
  • Holcátová, Ivana (author)
  • Richiardi, Lorenzo (author)
  • Kjaerheim, Kristina (author)
  • Agudo, Antonio (author)
  • Castellsagué, Xavier (author)
  • Macfarlane, Tatiana V (author)
  • Barzan, Luigi (author)
  • Canova, Cristina (author)
  • Thakker, Nalin S (author)
  • Conway, David I (author)
  • Znaor, Ariana (author)
  • Healy, Claire M (author)
  • Ahrens, Wolfgang (author)
  • Zaridze, David (author)
  • Szeszenia-Dabrowska, Neonilia (author)
  • Lissowska, Jolanta (author)
  • Fabianova, Eleonora (author)
  • Mates, Ioan Nicolae (author)
  • Bencko, Vladimir (author)
  • Foretova, Lenka (author)
  • Janout, Vladimir (author)
  • Curado, Maria Paula (author)
  • Koifman, Sergio (author)
  • Menezes, Ana (author)
  • Wünsch-Filho, Victor (author)
  • Eluf-Neto, José (author)
  • Boffetta, Paolo (author)
  • Garrote, Leticia Fernández (author)
  • Serraino, Diego (author)
  • Lener, Marcin (author)
  • Jaworowska, Ewa (author)
  • Lubiński, Jan (author)
  • Boccia, Stefania (author)
  • Rajkumar, Thangarajan (author)
  • Samant, Tanuja A (author)
  • Mahimkar, Manoj B (author)
  • Matsuo, Keitaro (author)
  • Franceschi, Silvia (author)
  • Byrnes, Graham (author)
  • Brennan, Paul (author)
  • McKay, James D (author)
  • Genetic Epidemiology group (GEP), International Agency for Research on Cancer (IARC), Lyon, France (creator_code:org_t)

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  • In:PLOS ONE: Public library science10:31932-6203

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