| 1. |
- Dennison, M. J., et al.
(författare)
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Biosensors for environmental monitoring
- 1995
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Ingår i: Biotechnology Advances. - : Elsevier. - 0734-9750 .- 1873-1899. ; 13:1, s. 1-12
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Forskningsöversikt (refereegranskat)abstract
- Increasing environmental legislation which controls the release and the levels of certain chemicals in the environment has created a need for reliable monitoring of these substances in air, soil and especially water. Conventional analytical techniques, although highly precise, suffer from the disadvantages of high cost, the need for trained personnel and the fact that they are mostly laboratory bound. Biosensors because of their specificity, fast response times, low cost, portability, ease of use and a continuous real time signal, can present distinct advantages in certain cases. Their biological base makes them ideal for toxicological measurements which are suited for health and safety applications. Over the last 3–4 years there has been an increase in the number of publications concerning biosensors for environmental monitoring, especially in the field of pesticide measurements.
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| 2. |
- Shionoya, Kiseko, 1964-, et al.
(författare)
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Immobilized enzyme film, protein immobilized film and process for forming the same : Patent abstracts. Patent No. 5356757
- 1995
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Ingår i: Biotechnology Advances. - : Elsevier. - 0734-9750 .- 1873-1899. ; 13:2, s. 300-300
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Tidskriftsartikel (refereegranskat)abstract
- Disclosed are an immobilized enzyme film, characterized in that said film is formed using an enzyme solution prepared by adding 1 to 3 parts by weight of a 50 to 100 wt % water-soluble crosslinking agent having at least two epoxy groups in the molecule and 1 to 3 parts by weight of a 1 to 2 wt % glutaraldehyde to 1 to 3 parts by weight of a 10 to 50 wt % aqueous protein solution containing an enzyme, and a process for forming the same on an ion-sensitive field effect transistor. The thus formed immobilized enzyme film is of an uniform thickness and stable by virtue of its increased hydrophilicity and higher elasticity, whereby deactivation of the enzyme to be caused by the shrinkage of the film can be prevented.
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| 3. |
- Abdelaziz, Omar Y., et al.
(författare)
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Biological valorization of low molecular weight lignin
- 2016
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Ingår i: Biotechnology Advances. - : Elsevier BV. - 0734-9750. ; 34:8, s. 1318-1346
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Forskningsöversikt (refereegranskat)abstract
- Lignin is a major component of lignocellulosic biomass and as such, it is processed in enormous amounts in the pulp and paper industry worldwide. In such industry it mainly serves the purpose of a fuel to provide process steam and electricity, and to a minor extent to provide low grade heat for external purposes. Also from other biorefinery concepts, including 2nd generation ethanol, increasing amounts of lignin will be generated. Other uses for lignin – apart from fuel production – are of increasing interest not least in these new biorefinery concepts. These new uses can broadly be divided into application of the polymer as such, native or modified, or the use of lignin as a feedstock for the production of chemicals. The present review focuses on the latter and in particular the advances in the biological routes for chemicals production from lignin. Such a biological route will likely involve an initial depolymerization, which is followed by biological conversion of the obtained smaller lignin fragments. The conversion can be either a short catalytic conversion into desired chemicals, or a longer metabolic conversion. In this review, we give a brief summary of sources of lignin, methods of depolymerization, biological pathways for conversion of the lignin monomers and the analytical tools necessary for characterizing and evaluating key lignin attributes.
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| 4. |
- Aminian-Dehkordi, Javad, et al.
(författare)
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Synthetic biology tools for environmental protection
- 2023
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Ingår i: Biotechnology Advances. - 0734-9750. ; 68
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Forskningsöversikt (refereegranskat)abstract
- Synthetic biology transforms the way we perceive biological systems. Emerging technologies in this field affect many disciplines of science and engineering. Traditionally, synthetic biology approaches were commonly aimed at developing cost-effective microbial cell factories to produce chemicals from renewable sources. Based on this, the immediate beneficial impact of synthetic biology on the environment came from reducing our oil dependency. However, synthetic biology is starting to play a more direct role in environmental protection. Toxic chemicals released by industries and agriculture endanger the environment, disrupting ecosystem balance and biodiversity loss. This review highlights synthetic biology approaches that can help environmental protection by providing remediation systems capable of sensing and responding to specific pollutants. Remediation strategies based on genetically engineered microbes and plants are discussed. Further, an overview of computational approaches that facilitate the design and application of synthetic biology tools in environmental protection is presented.
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| 5. |
- Ansell, Brendan R. E., et al.
(författare)
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Drug resistance in Giardia duodenalis
- 2015
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Ingår i: Biotechnology Advances. - : Elsevier BV. - 0734-9750 .- 1873-1899. ; 33:6, s. 888-901
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Forskningsöversikt (refereegranskat)abstract
- Giardia duodenalis is a microaerophilic parasite of the human gastrointestinal tract and a major contributor to diarrheal and post-infectious chronic gastrointestinal disease world-wide. Treatment of G. duodenalis infection currently relies on a small number of drug classes. Nitroheterocyclics, in particular metronidazole, have represented the front line treatment for the last 40 years. Nitroheterocyclic-resistant G. duodenalis have been isolated from patients and created in vitro, prompting considerable research into the biomolecular mechanisms of resistance. These compounds are redox-active and are believed to damage proteins and DNA after being activated by oxidoreductase enzymes in metabolically active cells. In this review, we explore the molecular phenotypes of nitroheterocyclic-resistant G. duodenalis described to date in the context of the protisfs unusual glycolytic and antioxidant systems. We propose that resistance mechanisms are likely to extend well beyond currently described resistance-associated enzymes (i.e., pyruvate ferredoxin oxidoreductases and nitroreductases), to include NAD(P)H- and flavin-generating pathways, and possibly redox-sensitive epigenetic regulation. Mechanisms that allow G. duodenalis to tolerate oxidative stress may lead to resistance against both oxygen and nitroheterocyclics, with implications for clinical control. The present review highlights the potential for systems biology tools and advanced bioinformatics to further investigate the multifaceted mechanisms of nitroheterocyclic resistance in this important pathogen.
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| 6. |
- Cámara, Elena, 1985, et al.
(författare)
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Data mining of Saccharomyces cerevisiae mutants engineered for increased tolerance towards inhibitors in lignocellulosic hydrolysates
- 2022
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Ingår i: Biotechnology Advances. - : Elsevier BV. - 0734-9750. ; 57
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Forskningsöversikt (refereegranskat)abstract
- The use of renewable plant biomass, lignocellulose, to produce biofuels and biochemicals using microbial cell factories plays a fundamental role in the future bioeconomy. The development of cell factories capable of efficiently fermenting complex biomass streams will improve the cost-effectiveness of microbial conversion processes. At present, inhibitory compounds found in hydrolysates of lignocellulosic biomass substantially influence the performance of a cell factory and the economic feasibility of lignocellulosic biofuels and chemicals. Here, we present and statistically analyze data on Saccharomyces cerevisiae mutants engineered for altered tolerance towards the most common inhibitors found in lignocellulosic hydrolysates: acetic acid, formic acid, furans, and phenolic compounds. We collected data from 7971 experiments including single overexpression or deletion of 3955 unique genes. The mutants included in the analysis had been shown to display increased or decreased tolerance to individual inhibitors or combinations of inhibitors found in lignocellulosic hydrolysates. Moreover, the data included mutants grown on synthetic hydrolysates, in which inhibitors were added at concentrations that mimicked those of lignocellulosic hydrolysates. Genetic engineering aimed at improving inhibitor or hydrolysate tolerance was shown to alter the specific growth rate or length of the lag phase, cell viability, and vitality, block fermentation, and decrease product yield. Different aspects of strain engineering aimed at improving hydrolysate tolerance, such as choice of strain and experimental set-up are discussed and put in relation to their biological relevance. While successful genetic engineering is often strain and condition dependent, we highlight the conserved role of regulators, transporters, and detoxifying enzymes in inhibitor tolerance. The compiled meta-analysis can guide future engineering attempts and aid the development of more efficient cell factories for the conversion of lignocellulosic biomass.
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| 7. |
- Dan, Meiling, et al.
(författare)
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Current insights of factors interfering the stability of lytic polysaccharide monooxygenases
- 2023
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Ingår i: Biotechnology Advances. - : Elsevier. - 0734-9750 .- 1873-1899. ; 67, s. 108216-108216
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Tidskriftsartikel (refereegranskat)abstract
- Cellulose and chitin are two of the most abundant biopolymers in nature, but they cannot be effectively utilized in industry due to their recalcitrance. This limitation was overcome by the advent of lytic polysaccharide monooxygenases (LPMOs), which promote the disruption of biopolymers through oxidative mechanism and provide a breakthrough in the action of hydrolytic enzymes. In the application of LPMOs to biomass degradation, the key to consistent and effective functioning lies in their stability. The efficient transformation of biomass resources using LPMOs depends on factors that interfere with their stability. This review discussed three aspects that affect LPMO stability: general external factors, structural factors, and factors in the enzyme-substrate reaction. It explains how these factors impact LPMO stability, discusses the resulting effects, and finally presents relevant measures and considerations, including potential resolutions. The review also provides suggestions for the application of LPMOs in polysaccharide degradation.
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| 8. |
- Golovitchev, Valeri, 1945, et al.
(författare)
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Construction of combusiton models for rapeseed methyl ester bio-diesel fuel for internal combusiton engine aplications
- 2009
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Ingår i: Biotechnology Advances. - : Elsevier BV. - 0734-9750. ; 27:5, s. 641-655
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Tidskriftsartikel (refereegranskat)abstract
- Bio-diesel fuels refer to non-petroleum based diesel fuels consisting of long chain alkyl esters produced by transesterifcation of vegetable oils, and proposed to be used (as neat or blended with conventional fuels) in unmodified diesel engines. Currently, there are few papers (see e.g. [1,2]) in which theoretical models for bio-diesel (e.g. RME) combustion simulations were reported. The models, developed in this paper, are modifications of those described in [1]. After the compilation of liquid fuel properties, the existing detailed mechanism of methyl butanoate ester, C5H10O2 [2, 3] oxidation was supplemented by sub-mechanisms for two proposed fuel constituent components, C7H16 and C7H8O (and, then, by mp2d and propyne, C3H4) to represent the combustion model of RME described by the chemical formula, C19H34O2 (or C19H36O2). The main fuel vapor thermal properties were taken as those of methyl palmitate C19H36O2 in the NASA polynomial form of the Burcat [4] database. The special global reaction was introduced to “crack” the main fuel into constituent components, which sub-mechanisms were collected in the general (309 species, 1472 reactions) including also soot and NOx formation processes. The detailed combustion mechanism was validated using shock-tube ignition-delay data at diesel engine conditions. For constant volume and diesel engine (Volvo D12C) combustion modeling, this mechanism was reduced to 88 species participating in 363 reactions.
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| 9. |
- Jullesson, David, 1987, et al.
(författare)
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Impact of synthetic biology and metabolic engineering on industrial production of fine chemicals
- 2015
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Ingår i: Biotechnology Advances. - : Elsevier BV. - 0734-9750. ; 33:7, s. 1395-1402
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Forskningsöversikt (refereegranskat)abstract
- Industrial bio-processes for fine chemical production are increasingly relying on cell factories developed through metabolic engineering and synthetic biology. The use of high throughput techniques and automation for the design of cell factories, and especially platform strains, has played an important role in the transition from laboratory research to industrial production. Model organisms such as Saccharomyces cerevisiae and Escherichia coli remain widely used host strains for industrial production due to their robust and desirable traits. This review describes some of the bio-based fine chemicals that have reached the market, key metabolic engineering tools that have allowed this to happen and some of the companies that are currently utilizing these technologies for developing industrial production processes.
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| 10. |
- Kumar, Saroj, et al.
(författare)
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Covalent and non-covalent chemical engineering of actin for biotechnological applications
- 2017
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Ingår i: Biotechnology Advances. - : Elsevier. - 0734-9750 .- 1873-1899. ; 35:7, s. 867-888
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Forskningsöversikt (refereegranskat)abstract
- The cytoskeletal filaments are self-assembled protein polymers with 8-25 nm diameters and up to several tens of micrometres length. They have a range of pivotal roles in eukaryotic cells, including transportation of intracellular cargoes (primarily microtubules with dynein and kinesin motors) and cell motility (primarily actin and myosin) where muscle contraction is one example. For two decades, the cytoskeletal filaments and their associated motor systems have been explored for nanotechnological applications including miniaturized sensor systems andlab-on-a-chip devices. Several developments have also revolved around possible exploitation of the filaments alone without their motor partners. Efforts to use the cytoskeletal filaments for applications often require chemical or genetic engineering of the filaments such as specific conjugation with fluorophores, antibodies, oligonucleotides or various macromolecular complexes e.g. nanoparticles. Similar conjugation methods are also instrumental for a range of fundamental biophysical studies. Here we review methods for non-covalent and covalent chemical modifications of actin filaments with focus on critical advantages and challenges of different methods as well as critical steps in the conjugation procedures. We also review potential uses of the engineered actin filaments in nanotechnological applications and in some key fundamental studies of actin and myosin function. Finally, we consider possible future lines of investigation that may be addressed by applying chemical conjugation of actin in new ways.
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