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- Arvidsson, Ida, et al.
(författare)
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Prediction of Obstructive Coronary Artery Disease from Myocardial Perfusion Scintigraphy using Deep Neural Networks
- 2021
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Ingår i: 2020 25TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION (ICPR). - : IEEE COMPUTER SOC. - 1051-4651. - 9781728188089 ; , s. 4442-4449
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Konferensbidrag (refereegranskat)abstract
- For diagnosis and risk assessment in patients with stable ischemic heart disease, myocardial perfusion scintigraphy is one of the most common cardiological examinations performed today. There are however many motivations for why an artificial intelligence algorithm would provide useful input to this task. For example to reduce the subjectiveness and save time for the nuclear medicine physicians working with this time consuming task. In this work we have developed a deep learning algorithm for multi-label classification based on a convolutional neural network to estimate the probability of obstructive coronary artery disease in the left anterior artery, left circumflex artery and right coronary artery. The prediction is based on data from myocardial perfusion scintigraphy studies conducted in a dedicated Cadmium-Zinc-Telluride cardio camera (D-SPECT Spectrum Dynamics). Data from 588 patients was available, with stress images in both upright and supine position, as well as a number of auxiliary parameters such as angina symptoms and age. The data was used to train and evaluate the algorithm using 5-fold cross-validation. We achieve state-of-the-art results for this task with an area under the receiver operating characteristics curve of 0.89 as average on per-vessel level and 0.95 on per-patient level.
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- Berg, Axel, et al.
(författare)
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Deep ordinal regression with label diversity
- 2021
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Ingår i: 2020 25th International Conference on Pattern Recognition (ICPR). - 1051-4651. - 9781728188089 ; , s. 2740-2747
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Konferensbidrag (refereegranskat)abstract
- Regression via classification (RvC) is a common method used for regression problems in deep learning, where the target variable belongs to a set of continuous values. By discretizing the target into a set of non-overlapping classes, it has been shown that training a classifier can improve neural network accuracy compared to using a standard regression approach. However, it is not clear how the set of discrete classes should be chosen and how it affects the overall solution. In this work, we propose that using several discrete data representations simultaneously can improve neural network learning compared to a single representation. Our approach is end-to-end differentiable and can be added as a simple extension to conventional learning methods, such as deep neural networks. We test our method on three challenging tasks and show that our method reduces the prediction error compared to a baseline RvC approach while maintaining a similar model complexity.
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- Gillsjö, David, et al.
(författare)
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In Depth Bayesian Semantic Scene Completion
- 2021
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Ingår i: 2020 25th International Conference on Pattern Recognition (ICPR). - 1051-4651. - 9781728188089 ; , s. 6335-6342
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Konferensbidrag (refereegranskat)
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6. |
- Moliner, Olivier, et al.
(författare)
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Better Prior Knowledge Improves Human-Pose-Based Extrinsic Camera Calibration
- 2021
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Ingår i: 2020 25th International Conference on Pattern Recognition (ICPR). - 1051-4651. - 9781728188089 ; , s. 4758-4765
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Konferensbidrag (refereegranskat)abstract
- Accurate extrinsic calibration of wide baseline multi-camera systems enables better understanding of 3D scenes for many applications and is of great practical importance. Classical Structure-from-Motion calibration methods require special calibration equipment so that accurate point correspondences can be detected between different views. In addition, an operator with some training is usually needed to ensure that data is collected in a way that leads to good calibration accuracy. This limits the ease of adoption of such technologies. Recently, methods have been proposed to use human pose estimation models to establish point correspondences, thus removing the need for any special equipment. The challenge with this approach is that human pose estimation algorithms typically produce much less accurate feature points compared to classical patch-based methods. Another problem is that ambient human motion might not be optimal for calibration. We build upon prior works and introduce several novel ideas to improve the accuracy of human-pose-based extrinsic calibration. Our first contribution is a robust reprojection loss based on a better understanding of the sources of pose estimation error. Our second contribution is a 3D human pose likelihood model learned from motion capture data. We demonstrate significant improvements in calibration accuracy by evaluating our method on four publicly available datasets.
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- Örnhag, Marcus Valtonen, et al.
(författare)
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Minimal Solvers for Indoor UAV Positioning
- 2021
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Ingår i: 2020 25TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION (ICPR). - : IEEE COMPUTER SOC. - 1051-4651. - 9781728188089 ; , s. 1136-1143
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Konferensbidrag (refereegranskat)abstract
- In this paper we consider a collection of relative pose problems which arise naturally in applications for visual indoor navigation using unmanned aerial vehicles (UAVs). We focus on cases where additional information from an onboard IMU is available and thus provides a partial extrinsic calibration through the gravitational vector. The solvers are designed for a partially calibrated camera, for a variety of realistic indoor scenarios, which makes it possible to navigate using images of the ground floor. Current state-of-the-art solvers use more general assumptions, such as using arbitrary planar structures; however, these solvers do not yield adequate reconstructions for real scenes, nor do they perform fast enough to be incorporated in real-time systems. We show that the proposed solvers enjoy better numerical stability, are faster, and require fewer point correspondences, compared to state-of-the-art approaches. These properties are vital components for robust navigation in real-time systems, and we demonstrate on both synthetic and real data that our method outperforms other solvers, and yields superior motion estimation(1).
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- Alvén, Jennifer, 1989, et al.
(författare)
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Shape-aware multi-atlas segmentation
- 2016
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Ingår i: Proceedings - International Conference on Pattern Recognition. - 1051-4651. ; 0, s. 1101-1106
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Konferensbidrag (refereegranskat)abstract
- Despite of having no explicit shape model, multi-atlas approaches to image segmentation have proved to be a top-performer for several diverse datasets and imaging modalities. In this paper, we show how one can directly incorporate shape regularization into the multi-atlas framework. Unlike traditional methods, our proposed approach does not rely on label fusion on the voxel level. Instead, each registered atlas is viewed as an estimate of the position of a shape model. We evaluate and compare our method on two public benchmarks: (i) the VISCERAL Grand Challenge on multi-organ segmentation of whole-body CT images and (ii) the Hammers brain atlas of MR images for segmenting the hippocampus and the amygdala. For this wide spectrum of both easy and hard segmentation tasks, our experimental quantitative results are on par or better than state-of-the-art. More importantly, we obtain qualitatively better segmentation boundaries, for instance, preserving fine structures.
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- Banerjee, Subhashis, et al.
(författare)
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Segmentation of Intracranial Aneurysm Remnant in MRA using Dual-Attention Atrous Net
- 2021
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Ingår i: 25th International Conference on Pattern Recognition (ICPR). - 9781728188089 ; , s. 9265-9272
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Konferensbidrag (refereegranskat)abstract
- Due to the advancement of non-invasive medical imaging modalities like Magnetic Resonance Angiography (MRA), an increasing number of Intracranial Aneurysm (IA) cases are being reported in recent years. The IAs are typically treated by so-called endovascular coiling, where blood flow in the IA is prevented by embolization with a platinum coil. Accurate quantification of the IA Remnant (IAR), i.e. the volume with blood flow present post treatment is the utmost important factor in choosing the right treatment planning. This is typically done by manually segmenting the aneurysm remnant from the MRA volume. Since manual segmentation of volumetric images is a labour-intensive and error-prone process, development of an automatic volumetric segmentation method is required. Segmentation of small structures such as IA, that may largely vary in size, shape, and location is considered extremely difficult. Similar intensity distribution of IAs and surrounding blood vessels makes it more challenging and susceptible to false positive. In this paper we propose a novel 3D CNN architecture called Dual-Attention Atrous Net (DAtt-ANet), which can efficiently segment IAR volumes from MRA images by reconciling features at different scales using the proposed Parallel Atrous Unit (PAU) along with the use of self-attention mechanism for extracting fine-grained features and intra-class correlation. The proposed DAtt-ANet model is trained and evaluated on a clinical MRA image dataset of IAR consisting of 46 subjects. We compared the proposed DAtt-ANet with five state-of-the-art CNN models based on their segmentation performance. The proposed DAtt-ANet outperformed all other methods and was able to achieve a five-fold cross-validation DICE score of 0.73 +/- 0.06.
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10. |
- Berg, Axel, et al.
(författare)
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Points to patches: Enabling the use of self-attention for 3D shape recognition
- 2022
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Ingår i: 2022 26th International Conference on Pattern Recognition (ICPR). - 1051-4651 .- 2831-7475. - 9781665490627 - 9781665490627 ; , s. 528-534
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Konferensbidrag (refereegranskat)abstract
- While the Transformer architecture has become ubiquitous in the machine learning field, its adaptation to 3D shape recognition is non-trivial. Due to its quadratic computational complexity, the self-attention operator quickly becomes inefficient as the set of input points grows larger. Furthermore, we find that the attention mechanism struggles to find useful connections between individual points on a global scale. In order to alleviate these problems, we propose a two-stage Point Transformer-in-Transformer (Point-TnT) approach which combines local and global attention mechanisms, enabling both individual points and patches of points to attend to each other effectively. Experiments on shape classification show that such an approach provides more useful features for downstream tasks than the baseline Transformer, while also being more computationally efficient. In addition, we also extend our method to feature matching for scene reconstruction, showing that it can be used in conjunction with existing scene reconstruction pipelines.
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