| 1. |
- Choquet, Marvin, et al.
(författare)
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The complete mitochondrial genome of the copepod Calanus glacialis
- 2017
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Ingår i: Mitochondrial DNA Part B. - : Informa UK Limited. - 2380-2359. ; 2:2, s. 506-507
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Tidskriftsartikel (refereegranskat)abstract
- Calanus glacialis, a marine planktonic copepod, is a keystone species in the Arctic Ocean. In this study, we shotgun sequenced the total DNA of one C. glacialis individual, using the NextSeq® Illumina platform, in order to determine its mitochondrial genome sequence. We successfully assembled and annotated this 20,674bp long sequence, which included 13 protein-coding genes, 2 rRNA genes and 22 tRNA genes. Common gene-coding regions of 19 other species were used to reconstruct a phylogenetic tree, using mitogenomes of the phylogenetically closest copepods available. The new resource described here constitutes a tool of interest for better understanding the structure and dynamics of C. glacialis populations.
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| 2. |
- Dias, Guilherme, 1989-, et al.
(författare)
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Complete mitochondrial genome of the longhorn date palm stem borer Jebusaea hammerschmidtii (Reiche, 1878).
- 2021
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Ingår i: Mitochondrial DNA Part B. - : Informa UK Limited. - 2380-2359. ; 6:11, s. 3214-3216
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Tidskriftsartikel (refereegranskat)abstract
- The 15,619 bp mitochondrial genome of Jebusaea hammerschmidtii was assembled from short reads, annotated, and compared to the genomes of other longhorn beetles (Cerambycidae). Gene content was typical of animal mitochondrial genomes and contained 13 protein-coding, 22 tRNA, and 2 rRNA genes. Gene organization was identical to that of other longhorn beetles. Phylogenetic analysis placed J. hammerschmidtii within the subfamily Cerambycinae, and strongly supported the monophyly of the Cerambycinae, Lamiinae, and Prioninae subfamilies.
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| 3. |
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| 4. |
- Semyenova, Seraphima, et al.
(författare)
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The complete mitochondrial genome of the causative agent of the human cercarial dermatitis, the visceral bird schistosome species Trichobilharzia szidati (Platyhelminthes: Trematoda: Schistosomatidae)
- 2017
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Ingår i: Mitochondrial DNA Part B. - : Informa UK Ltd.. - 2380-2359. ; 2:2, s. 469-470
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Tidskriftsartikel (refereegranskat)abstract
- We report the first complete mitochondrial genome of visceral bird schistosome Trichobilharzia szidati (Platyhelminthes, Trematoda: Schistosomatidae). The circular genome is 14293 bp in length and contains 12 protein-coding genes, 12S and 16S rRNAs genes, 22 tRNAs and one non-coding region (202 bp) (accession number MF136777). Phylogenetic relationships based on 12 protein-coding gene sequences (PCG) of mitogenomes of a number of trematode and cestode species have shown that T. szidati is the closest genetic relative to nasal bird schistosome T. regenti. The complete mitogenome sequence of T. szidati may serve as a resource for comparative mitogenomics and trematode evolution studies.
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| 5. |
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| 6. |
- Westbury, Michael, et al.
(författare)
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Complete mitochondrial genome of a bat-eared fox (Otocyon megalotis), along with phylogenetic considerations
- 2017
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Ingår i: Mitochondrial DNA Part B. - : Informa UK Limited. - 2380-2359. ; 2:1, s. 298-299
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Tidskriftsartikel (refereegranskat)abstract
- The bat-eared fox, Otocyon megalotis, is the only member of its genus and is thought to occupy a basal position within the dog family. These factors can lead to challenges in complete mitochondrial reconstructions and accurate phylogenetic positioning. Here, we present the first complete mitochondrial genome of the bat-eared fox recovered using shotgun sequencing and iterative mapping to three distantly related species. Phylogenetic analyses placed the bat-eared fox basal in the Canidae family within the clade including true foxes (Vulpes) and the raccoon dog (Nyctereutes) with high support values. This position is in good agreement with previously published results based on short fragments of mitochondrial and nuclear genes, therefore adding more support to the basal positioning of the bat-eared fox within Canidae.
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