| 1. |
- Alcalde, Juan, et al.
(författare)
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3D geological characterization of the Hontomin CO2 storage site, Spain : Multidisciplinary approach from seismic, well-log and regional data
- 2014
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Ingår i: Tectonophysics. - : Elsevier BV. - 0040-1951 .- 1879-3266. ; 627, s. 6-25
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Tidskriftsartikel (refereegranskat)abstract
- The first Spanish Technological Development plant for CO2 storage is currently under development in Hontomin (Spain), in a fractured carbonate reservoir. The subsurface 3D geological structures of the Hontomin site were interpreted using well-log and 3D seismic reflection data. A shallow low velocity zone affects the wave propagation and decreases the coherency of the underlying seismic reflections, deteriorating the quality of the seismic data, and thus preventing a straightforward seismic interpretation. In order to provide a fully constrained model, a geologically supervised interpretation was carried out. In particular, a conceptual geological model was derived from an exhaustive well-logging analysis. This conceptual model was then improved throughout a detailed seismic facies analysis on selected seismic sections crossing the seismic wells and in consistency with the regional geology, leading to the interpretation of the entire 3D seismic volume. This procedure allowed characterizing nine main geological levels and four main fault sets. Thus, the stratigraphic sequence of the area and the geometries of the subsurface structures were defined. The resulting depth-converted 3D geological model allowed us to estimate a maximum CO2 storage capacity of 5.85 Mt. This work provides a 3D geological model of the Hontomin subsurface, which is a challenging case study of CO2 storage in a complex fractured carbonate reservoir.
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| 2. |
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| 3. |
- Ayarza, Puy, et al.
(författare)
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Evolution of the Iberian Massif as deduced from its crustal thickness and geometry of a mid-crustal (Conrad) discontinuity
- 2021
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Ingår i: Solid Earth. - : Copernicus Publications. - 1869-9510 .- 1869-9529. ; 12:7, s. 1515-1547
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Tidskriftsartikel (refereegranskat)abstract
- Y Normal incidence seismic data provide the best images of the crust and lithosphere. When properly designed and continuous, these sections greatly contribute to understanding the geometry of orogens and, along with surface geology, unraveling their evolution. In this paper we present the most complete transect, to date, of the Iberian Massif, the westernmost exposure of the European Variscides. Despite the heterogeneity of the dataset, acquired during the last 30 years, the images resulting from reprocessing the data with a homogeneous workflow allow us to clearly define the crustal thickness and its internal architecture. The Iberian Massif crust, formed by the amalgamation of continental pieces belonging to Gondwana and Laurussia (Avalonian margin), is well structured in the upper and lower crust. A conspicuous mid-crustal discontinuity is clearly defined by the top of the reflective lower crust and by the asymptotic geometry of reflections that merge into it, suggesting that it has often acted as a detachment. The geometry and position of this discontinuity can give us insights into the evolution of the orogen (i.e., of the magnitude of compression and the effects and extent of later-Variscan gravitational collapse). Moreover, the limited thickness of the lower crust below, in central and northwestern Iberia, might have constrained the response of the Iberian microplate to Alpine shortening. Here, this discontinuity, featuring a Vp (P-wave velocity) increase, is observed as an orogen-scale boundary with characteristics compatible with those of the globally debated Conrad discontinuity.
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| 4. |
- Concepcion Gil-Rodriguez, Maria, et al.
(författare)
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De Novo Heterozygous Mutations in SMC3 Cause a Range of Cornelia de Lange Syndrome-Overlapping Phenotypes
- 2015
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Ingår i: Human Mutation. - : Wiley: 12 months. - 1059-7794 .- 1098-1004. ; 36:4, s. 454-462
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Tidskriftsartikel (refereegranskat)abstract
- Cornelia de Lange syndrome (CdLS) is characterized by facial dysmorphism, growth failure, intellectual disability, limb malformations, and multiple organ involvement. Mutations in five genes, encoding subunits of the cohesin complex (SMC1A, SMC3, RAD21) and its regulators (NIPBL, HDAC8), account for at least 70% of patients with CdLS or CdLS-like phenotypes. To date, only the clinical features from a single CdLS patient with SMC3 mutation has been published. Here, we report the efforts of an international research and clinical collaboration to provide clinical comparison of 16 patients with CdLS-like features caused by mutations in SMC3. Modeling of the mutation effects on protein structure suggests a dominant-negative effect on the multimeric cohesin complex. When compared with typical CdLS, many SMC3-associated phenotypes are also characterized by postnatal microcephaly but with a less distinctive craniofacial appearance, a milder prenatal growth retardation that worsens in childhood, few congenital heart defects, and an absence of limb deficiencies. While most mutations are unique, two unrelated affected individuals shared the same mutation but presented with different phenotypes. This work confirms that de novo SMC3 mutations account for approximate to 1%-2% of CdLS-like phenotypes.
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| 5. |
- DeFelipe, Irene, et al.
(författare)
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Reassessing the lithosphere : SeisDARE, an open-access seismic data repository
- 2021
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Ingår i: Earth System Science Data. - : Copernicus Publications. - 1866-3508 .- 1866-3516. ; 13:3, s. 1053-1071
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Tidskriftsartikel (refereegranskat)abstract
- Seismic reflection data (normal incidence and wide angle) are unique assets for solid Earth sciences as they provide critical information about the physical properties and structure of the lithosphere as well as about the shallow subsurface for exploration purposes. The resolution of these seismic data is highly appreciated; however they are logistically complex and expensive to acquire, and their geographical coverage is limited. Therefore, it is essential to make the most of the data that have already been acquired. The collation and dissemination of seismic open-access data are then key to promote accurate and innovative research and to enhance new interpretations of legacy data. This work presents the Seismic DAta REpository (SeisDARE), which is, to our knowledge, one of the first comprehensive open-access online databases that stores seismic data registered with a permanent identifier (DOI). The datasets included here are openly accessible online and guarantee the FAIR (findable, accessible, interoperable, reusable) principles of data management, granting the inclusion of each dataset in a statistics referencing database so its impact can be measured. SeisDARE includes seismic data acquired in the last 4 decades in the Iberian Peninsula and Morocco. These areas have attracted the attention of international researchers in the fields of geology and geophysics due to the exceptional outcrops of the Variscan and Alpine orogens and wide foreland basins, the crustal structure of the offshore margins that resulted from a complex plate kinematic evolution, and the vast quantities of natural resources contained within. This database has been built thanks to a network of national and international institutions, promoting a multidisciplinary research and is open for international data exchange and collaborations. As part of this international collaboration, and as a model for inclusion of other global seismic datasets, SeisDARE also hosts seismic data acquired in Hardeman County, Texas (USA), within the COCORP project (Consortium for Continental Reflection Profiling). SeisDARE aims to make easily accessible old and recently acquired seismic data and to establish a framework for future seismic data management plans. SeisDARE is freely available at https://digital.csic.es/handle/10261/101879 (a detailed list of the datasets can be found in Table 1), bringing endless research and teaching opportunities to the scientific, industrial, and educational communities.
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| 6. |
- Gil de la Iglesia, Alba, et al.
(författare)
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Reflection seismic imaging to unravel subsurface geological structures of the Zinkgruvan mining area, central Sweden
- 2021
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Ingår i: Ore Geology Reviews. - : Elsevier. - 0169-1368 .- 1872-7360. ; 137
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Tidskriftsartikel (refereegranskat)abstract
- The Zinkgruvan mining area is located on the south-eastern part of the Bergslagen district, one of the three major mineral producing regions in Sweden. In this study, we present the results from three (P1, P2 and P8) reflection seismic profiles each approximately 3000 m-long crossing the Zinkgruvan Zn-Pb-Ag-(Cu) mining area. P1 was acquired using cabled geophones with 10 m receiver and source interval and crossed major geological features. The other two profiles (P2 and P8) were acquired by wireless recorders with 20 m receiver and 10 m source interval and ran perpendicular to P1. Through a special data processing workflow adapted to this dataset, good quality seismic sections were obtained along these profiles, although a high noise level due to high voltage electric power lines was present. The interpretations were constrained by (1) seismic P-wave velocity and density data from a series of downhole logging measurements, (2) 3D forward reflection traveltime modelling in both pre- and post-stack domains, and (3) other geophysical and geological observations available from the site. Despite the notably complex geology, the processed seismic sections clearly reveal a series of horizontal to gently dipping reflections associated with known geological formations. Results indicate that most structures and lithological contacts dip or plunge to the northeast, including the targeted Zinkgruvan Formation. The results from this seismic survey are encouraging regarding the potential of the seismic method for base-metal exploration in Sweden and in particular in the Bergslagen district. It shows the high resolving power of the reflection seismic methods for imaging complex geological structures in a cost-effective and environmentally-friendly way.
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| 7. |
- Krab, Lianne C., et al.
(författare)
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Delineation of phenotypes and genotypes related to cohesin structural protein RAD21
- 2020
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Ingår i: Human Genetics. - : Springer Science and Business Media LLC. - 0340-6717 .- 1432-1203. ; 139:5, s. 575-592
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Tidskriftsartikel (refereegranskat)abstract
- RAD21 encodes a key component of the cohesin complex, and variants in RAD21 have been associated with Cornelia de Lange Syndrome (CdLS). Limited information on phenotypes attributable to RAD21 variants and genotype–phenotype relationships is currently published. We gathered a series of 49 individuals from 33 families with RAD21 alterations [24 different intragenic sequence variants (2 recurrent), 7 unique microdeletions], including 24 hitherto unpublished cases. We evaluated consequences of 12 intragenic variants by protein modelling and molecular dynamic studies. Full clinical information was available for 29 individuals. Their phenotype is an attenuated CdLS phenotype compared to that caused by variants in NIPBL or SMC1A for facial morphology, limb anomalies, and especially for cognition and behavior. In the 20 individuals with limited clinical information, additional phenotypes include Mungan syndrome (in patients with biallelic variants) and holoprosencephaly, with or without CdLS characteristics. We describe several additional cases with phenotypes including sclerocornea, in which involvement of the RAD21 variant is uncertain. Variants were frequently familial, and genotype–phenotype analyses demonstrated striking interfamilial and intrafamilial variability. Careful phenotyping is essential in interpreting consequences of RAD21 variants, and protein modeling and dynamics can be helpful in determining pathogenicity. The current study should be helpful when counseling families with a RAD21 variation.
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