| 1. |
- Beal, Jacob, et al.
(författare)
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Robust estimation of bacterial cell count from optical density
- 2020
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Ingår i: Communications Biology. - : Springer Science and Business Media LLC. - 2399-3642. ; 3:1
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Tidskriftsartikel (refereegranskat)abstract
- Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data.
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| 2. |
- Andersson, Mikael Svante, et al.
(författare)
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Ageing dynamics of a superspin glass
- 2014
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Ingår i: Europhysics letters. - : IOP Publishing. - 0295-5075 .- 1286-4854. ; 108:1, s. 17004-
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Tidskriftsartikel (refereegranskat)abstract
- Magnetization dynamics of a model superspin glass system consisting of nearly monodispersed close-packed maghemite particles of diameter 8 nm is investigated. The observed non-equilibrium features of the dynamics are qualitatively similar to those of atomic spin glass systems. The intrinsic relaxation function, as observed in zero-field-cooled magnetization relaxation experiments, depends on the time the sample has been kept at constant temperature (ageing). Accompanying low-field experiments show that the archetypal spin glass characteristics -ageing, memory and rejuvenation- are reproduced in this dense system of dipolar-dipolar interacting superspins.
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| 3. |
- Andersson, Mikael Svante, et al.
(författare)
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Effects of the individual particle relaxation time on superspin glass dynamics
- 2016
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Ingår i: PHYSICAL REVIEW B. - 2469-9950. ; 93:5
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Tidskriftsartikel (refereegranskat)abstract
- The low temperature dynamic magnetic properties of two dense magnetic nanoparticle assemblies with similar superspin glass transition temperatures T-g similar to 140 K are compared. The two samples are made from batches of 6 and 8 nm monodisperse gamma-Fe2O3 nanoparticles, respectively. The properties of the individual particles are extracted from measurements on reference samples where the particles have been covered with a thick silica coating. The blocking temperatures of these dilute assemblies are found at 12.5 K for the 6 nm particles and at 35 K for the 8 nm particles, which implies different anisotropy energy barriers of the individual particles and vastly different temperature evolution of their relaxation times. The results of the measurements on the concentrated particle assemblies suggest a strong influence of the particle energy barrier on the details of the aging dynamics, memory behavior, and apparent superspin dimensionality of the particles.
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| 4. |
- Andersson, Mikael Svante, et al.
(författare)
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Particle size-dependent superspin glass behavior in random compacts of monodisperse maghemite nanoparticles
- 2016
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Ingår i: Materials Research Express. - : IOP Publishing. - 2053-1591. ; 3:4
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Tidskriftsartikel (refereegranskat)abstract
- Dense random assemblies made from highly monodisperse gamma-Fe2O3 nanoparticles with sizes ranging from 6.2 to 11.5 nm have been investigated by DC and AC magnetometry. It is found that all assemblies undergo superspin glass phase transitions. The superspin glass phase transition temperature is strongly dependent on the particle size and the nature of the interparticle interaction. However the transition from superparamagnet to superspin glass, as evidenced by the shape of the ac-susceptibility curves and the dynamic critical exponents associated with the transition, is similar in all systems.
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| 5. |
- Andersson, Mikael Svante, et al.
(författare)
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Size-dependent surface effects in maghemite nanoparticles and its impact on interparticle interactions in dense assemblies
- 2015
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Ingår i: Nanotechnology. - : IOP Publishing. - 0957-4484 .- 1361-6528. ; 26:47
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Tidskriftsartikel (refereegranskat)abstract
- The question of the dominant interparticle magnetic interaction type in random closely packed assemblies of different diameter (6.2-11.5 nm) bare maghemite nanoparticles (NPs) is addressed. Single-particle magnetic properties such as particle anisotropy and exchange bias field are first of all studied in dilute (reference) systems of these same NPs, where interparticle interactions are neglible. Substantial surface spin disorder is revealed in all particles except the smallest, viz. for diameters d = 8-11.5 nm but not for d = 6.2-6.3 nm. X-ray diffraction analysis points to a crystallographic origin of this effect. The study of closely packed assemblies of the d >= 8 nm particles observes collective (superspin) freezing that clearly appears to be governed by interparticle dipole interactions. However, the dense assemblies of the smallest particles exhibit freezing temperatures that are higher than expected from a simple (dipole) extrapolation of the corresponding temperatures found in the d >= 8 nm assemblies. It is suggested that the nature of the dominant interparticle interaction in these smaller particle assemblies is superexchange, whereby the lack of significant surface spin disorder allows this mechanism to become important at the level of interacting superspins.
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