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| 2. |
- Klionsky, Daniel J., et al.
(författare)
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Guidelines for the use and interpretation of assays for monitoring autophagy
- 2012
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Ingår i: Autophagy. - : Informa UK Limited. - 1554-8635 .- 1554-8627. ; 8:4, s. 445-544
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Forskningsöversikt (refereegranskat)abstract
- In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
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| 3. |
- Pastorelli, Giada, et al.
(författare)
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Constraining the thermally pulsing asymptotic giant branch phase with resolved stellar populations in the Large Magellanic Cloud
- 2020
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Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966. ; 498:3, s. 3283-3301
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Tidskriftsartikel (refereegranskat)abstract
- Reliable models of the thermally pulsing asymptotic giant branch (TP-AGB) phase are of critical importance across astrophysics, including our interpretation of the spectral energy distribution of galaxies, cosmic dust production, and enrichment of the interstellar medium. With the aim of improving sets of stellar isochrones that include a detailed description of the TP-AGB phase, we extend our recent calibration of the AGB population in the Small Magellanic Cloud (SMC) to the more metal-rich Large Magellanic Cloud (LMC). We model the LMC stellar populations with the TRILEGAL code, using the spatially resolved star formation history derived from the VISTA survey. We characterize the efficiency of the third dredge-up by matching the star counts and the K-s-band luminosity functions of the AGB stars identified in the LMC. In line with previous findings, we confirm that, compared to the SMC, the third dredge-up in AGB stars of the LMC is somewhat less efficient, as a consequence of the higher metallicity. The predicted range of initial mass of C-rich stars is between M-i approximate to 1.7 and 3 M-circle dot at Z(i) = 0.008. We show how the inclusion of new opacity data in the carbon star spectra will improve the performance of our models. We discuss the predicted lifetimes, integrated luminosities, and mass-loss rate distributions of the calibrated models. The results of our calibration are included in updated stellar isochrones publicly available.
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| 4. |
- Arendt, Richard G., et al.
(författare)
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JWST NIRCam Observations of SN 1987A : Spitzer Comparison and Spectral Decomposition
- 2023
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Ingår i: Astrophysical Journal. - : American Astronomical Society. - 0004-637X .- 1538-4357. ; 959:2
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Tidskriftsartikel (refereegranskat)abstract
- JWST Near Infrared Camera (NIRCam) observations at 1.5–4.5 μm have provided broadband and narrowband imaging of the evolving remnant of SN 1987A with unparalleled sensitivity and spatial resolution. Comparing with previous marginally spatially resolved Spitzer Infrared Array Camera (IRAC) observations from 2004 to 2019 confirms that the emission arises from the circumstellar equatorial ring (ER), and the current brightness at 3.6 and 4.5 μm was accurately predicted by extrapolation of the declining brightness tracked by IRAC. Despite the regular light curve, the NIRCam observations clearly reveal that much of this emission is from a newly developing outer portion of the ER. Spots in the outer ER tend to lie at position angles in between the well-known ER hotspots. We show that the bulk of the emission in the field can be represented by five standard spectral energy distributions, each with a distinct origin and spatial distribution. This spectral decomposition provides a powerful technique for distinguishing overlapping emission from the circumstellar medium and the supernova ejecta, excited by the forward and reverse shocks, respectively.
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| 5. |
- Hirschauer, Alec S., et al.
(författare)
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Imaging of I Zw 18 by JWST. I. Detecting Dusty Stellar Populations
- 2024
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Ingår i: Astronomical Journal. - 1538-3881 .- 0004-6256. ; 168:1
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Tidskriftsartikel (refereegranskat)abstract
- We present a JWST imaging survey of I Zw 18, the archetypal extremely metal-poor, star-forming (SF), blue compact dwarf galaxy. With an oxygen abundance of only similar to 3% Z circle dot, it is among the lowest-metallicity systems known in the local Universe, and is, therefore, an excellent accessible analog for the galactic building blocks which existed at early epochs of ionization and star formation. These JWST data provide a comprehensive infrared (IR) view of I Zw 18 with eight filters utilizing both Near Infrared Camera (F115W, F200W, F356W, and F444W) and Mid-Infrared Instrument (F770W, F1000W, F1500W, and F1800W) photometry, which we have used to identify key stellar populations that are bright in the near- and mid-IR. These data allow for a better understanding of the origins of dust and dust-production mechanisms in metal-poor environments by characterizing the population of massive, evolved stars in the red supergiant (RSG) and asymptotic giant branch (AGB) phases. In addition, it enables the identification of the brightest dust-enshrouded young stellar objects (YSOs), which provide insight into the formation of massive stars at extremely low metallicities typical of the very early Universe. This paper provides an overview of the observational strategy and data processing, and presents first science results, including identifications of dusty AGB, RSG, and bright YSO candidates. These first results assess the scientific quality of JWST data and provide a guide for obtaining and interpreting future observations of the dusty and evolved stars inhabiting compact dwarf SF galaxies in the local Universe.
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| 6. |
- Jencson, Jacob E., et al.
(författare)
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AT 2019qyl in NGC 300 : Internal Collisions in the Early Outflow from a Very Fast Nova in a Symbiotic Binary
- 2021
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Ingår i: Astrophysical Journal. - : American Astronomical Society. - 0004-637X .- 1538-4357. ; 920:2
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Tidskriftsartikel (refereegranskat)abstract
- Nova eruptions, thermonuclear explosions on the surfaces of white dwarfs (WDs), are now recognized to be among the most common shock-powered astrophysical transients. We present the early discovery and rapid ultraviolet (UV), optical, and infrared (IR) temporal development of AT 2019qyl, a recent nova in the nearby Sculptor Group galaxy NGC 300. The light curve shows a rapid rise lasting ≲1 day, reaching a peak absolute magnitude of MV = −9.2 mag and a very fast decline, fading by 2 mag over 3.5 days. A steep dropoff in the light curves after 71 days and the rapid decline timescale suggest a low-mass ejection from a massive WD with MWD ≳ 1.2 M⊙. We present an unprecedented view of the early spectroscopic evolution of such an event. Three spectra prior to the peak reveal a complex, multicomponent outflow giving rise to internal collisions and shocks in the ejecta of an He/N-class nova. We identify a coincident IR-variable counterpart in the extensive preeruption coverage of the transient location and infer the presence of a symbiotic progenitor system with an O-rich asymptotic-giant-branch donor star, as well as evidence for an earlier UV-bright outburst in 2014. We suggest that AT 2019qyl is analogous to the subset of Galactic recurrent novae with red-giant companions such as RS Oph and other embedded nova systems like V407 Cyg. Our observations provide new evidence that internal shocks between multiple, distinct outflow components likely contribute to the generation of the shock-powered emission from such systems.
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| 7. |
- Pastorelli, Giada, et al.
(författare)
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Constraining the thermally pulsing asymptotic giant branch phase with resolved stellar populations in the Small Magellanic Cloud
- 2019
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Ingår i: Monthly notices of the Royal Astronomical Society. - : OXFORD UNIV PRESS. - 0035-8711 .- 1365-2966. ; 485:4, s. 5666-5692
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Tidskriftsartikel (refereegranskat)abstract
- The thermally pulsing asymptotic giant branch (TP-AGB) experienced by low-and intermediate-mass stars is one of the most uncertain phases of stellar evolution and the models need to be calibrated with the aid of observations. To this purpose, we couple high-quality observations of resolved stars in the Small Magellanic Cloud (SMC) with detailed stellar population synthesis simulations computed with the TRILEGAL code. The strength of our approach relies on the detailed spatially resolved star formation history of the SMC, derived from the deep near-infrared photometry of the VISTA survey of the Magellanic Clouds, as well as on the capability to quickly and accurately explore a wide variety of parameters and effects with the COLIBRI code for the TP-AGB evolution. Adopting a well-characterized set of observations - star counts and luminosity functions - we set up a calibration cycle along which we iteratively change a few key parameters of the TP-AGB models until we eventually reach a good fit to the observations. Our work leads to identify two best-fitting models that mainly differ in the efficiencies of the third dredge-up and mass-loss in TP-AGB stars with initial masses larger than about 3 M-circle dot. On the basis of these calibrated models, we provide a full characterization of the TP-AGB stellar population in the SMC in terms of stellar parameters (initial masses, C/O ratios, carbon excess, mass-loss rates). Extensive tables of isochrones including these improved models are publicly available.
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