| 1. |
- Abelev, Betty, et al.
(författare)
-
Long-range angular correlations on the near and away side in p-Pb collisions at root S-NN=5.02 TeV
- 2013
-
Ingår i: Physics Letters. Section B: Nuclear, Elementary Particle and High-Energy Physics. - : Elsevier BV. - 0370-2693. ; 719:1-3, s. 29-41
-
Tidskriftsartikel (refereegranskat)abstract
- Angular correlations between charged trigger and associated particles are measured by the ALICE detector in p-Pb collisions at a nucleon-nucleon centre-of-mass energy of 5.02 TeV for transverse momentum ranges within 0.5 < P-T,P-assoc < P-T,P-trig < 4 GeV/c. The correlations are measured over two units of pseudorapidity and full azimuthal angle in different intervals of event multiplicity, and expressed as associated yield per trigger particle. Two long-range ridge-like structures, one on the near side and one on the away side, are observed when the per-trigger yield obtained in low-multiplicity events is subtracted from the one in high-multiplicity events. The excess on the near-side is qualitatively similar to that recently reported by the CMS Collaboration, while the excess on the away-side is reported for the first time. The two-ridge structure projected onto azimuthal angle is quantified with the second and third Fourier coefficients as well as by near-side and away-side yields and widths. The yields on the near side and on the away side are equal within the uncertainties for all studied event multiplicity and p(T) bins, and the widths show no significant evolution with event multiplicity or p(T). These findings suggest that the near-side ridge is accompanied by an essentially identical away-side ridge. (c) 2013 CERN. Published by Elsevier B.V. All rights reserved.
|
|
| 2. |
- Abelev, Betty, et al.
(författare)
-
Measurement of prompt J/psi and beauty hadron production cross sections at mid-rapidity in pp collisions at root s=7 TeV
- 2012
-
Ingår i: Journal of High Energy Physics. - 1029-8479. ; :11
-
Tidskriftsartikel (refereegranskat)abstract
- The ALICE experiment at the LHC has studied J/psi production at mid-rapidity in pp collisions at root s = 7 TeV through its electron pair decay on a data sample corresponding to an integrated luminosity L-int = 5.6 nb(-1). The fraction of J/psi from the decay of long-lived beauty hadrons was determined for J/psi candidates with transverse momentum p(t) > 1,3 GeV/c and rapidity vertical bar y vertical bar < 0.9. The cross section for prompt J/psi mesons, i.e. directly produced J/psi and prompt decays of heavier charmonium states such as the psi(2S) and chi(c) resonances, is sigma(prompt J/psi) (p(t) > 1.3 GeV/c, vertical bar y vertical bar < 0.9) = 8.3 +/- 0.8(stat.) +/- 1.1 (syst.)(-1.4)(+1.5) (syst. pol.) mu b. The cross section for the production of b-hadrons decaying to J/psi with p(t) > 1.3 GeV/c and vertical bar y vertical bar < 0.9 is a sigma(J/psi <- hB) (p(t) > 1.3 GeV/c, vertical bar y vertical bar < 0.9) = 1.46 +/- 0.38 (stat.)(-0.32)(+0.26) (syst.) mu b. The results are compared to QCD model predictions. The shape of the p(t) and y distributions of b-quarks predicted by perturbative QCD model calculations are used to extrapolate the measured cross section to derive the b (b) over bar pair total cross section and d sigma/dy at mid-rapidity.
|
|
| 3. |
- Brun, Annick, et al.
(författare)
-
Structure and function of the ectomycorrhizal association between Paxillus involutus (Batsch) Fr. and Betula pendula Roth .L. Dynamics of mycorrhiza formation
- 1995
-
Ingår i: New Phytologist. - 1469-8137. ; 129:3, s. 487-493
-
Tidskriftsartikel (refereegranskat)abstract
- Detailed examination of the structural and functional integration taking place during mycorrhiza formation necessitates rapid and aseptic synthesis of uniform mycorrhizal structures at well-defined stages of development. A system is described for formation of ectomycorrhizas between Betula pendula Roth. and Paxillus involutus (Batsch) Fr. Small sterile seedlings were placed directly on fungal colonies growing on cellophane covered agar plates. Microscopic examination during the course of development indicated an initial rapid colonization of the roots and formation of a fully developed mantle within 2-4 d. Hartig net formation was evident after 8 d of contact and involved a transition from a paraepidermal organization to a mature periepidermal Hartig net after 15 d of contact. Using a standard fungal growth medium, formation and development of mycorrhizas were not greatly affected by changes in the overall concentrations of nitrogen and phosphorus but changes in the ratio of nitrogen to phosphorus had strong effects on development and mycorrhiza formation was completely suppressed when the ratio of nitrogen to phosphorus was increased. These differences were not related to the effects of nitrogen or phosphorus on linear growth of the fungus.
|
|
| 4. |
- Chalot, Michel, et al.
(författare)
-
Factors affecting amino-acid-uptake by the ectomycorrhizal fungus Paxillus involutus
- 1995
-
Ingår i: Mycological Research. - 0953-7562. ; 99:9, s. 1131-1138
-
Tidskriftsartikel (refereegranskat)abstract
- Factors affecting amino acid uptake by the ectomycorrhizal fungus Paxillus involutus were investigated using tracer kinetic experiments. Amino acid uptake by P. involutus was dependent on the pH of the incubation medium. Uptake of L-glutamate and L-glutamine had a distinct pH optimum around pH 4.0 and declined sharply between pH 4.5 and 6.4. Uptake of alanine and aspartate was also highest at low pH values (3-4) but declined more slowly with increasing pH. Total uptake of labelled amino acids was unaffected by 0.05 or 0.5 mM ammonium while 5 mM ammonium decreased amino acid uptake. Nitrate or glucose did not significantly affect amino acid uptake but glucose greatly increased the proportion of carbon that was respired. Uptake of the different amino acids decreased by a factor of 4 to 10 with increasing age (1-5 wk) and the proportion of absorbed C-14 that was respired increased with age. Changes in the size of the total amino acid pool were inversely related to those in the rate of uptake and the pool increased steadily with age. The implications of the ability of P. involutus to take up amino acids are discussed.
|
|
| 5. |
- Chalot, Michel, et al.
(författare)
-
Kinetics, energetics and specificity of a general amino acid transporter from the ectomycorrhizal fungus Paxillus involutus
- 1996
-
Ingår i: Microbiology. - : Microbiology Society. - 1465-2080 .- 1350-0872. ; 142, s. 1749-1756
-
Tidskriftsartikel (refereegranskat)abstract
- The kinetics, energetics and specificity of a general amino acid transporter were studied in the ectomycorrhizal fungus Paxillus involutus (Batsch) Fr. The uptake of amino acids showed features characteristic of active transport. After correction for a non-mediated transport component, the kinetics of glutamate, glutamine, alanine and aspartate uptake measured over a wide concentration range followed the simple Michaelis-Menten saturation curves, The apparent K-m derived from the Eadie-Hofstee plots ranged from 7 mu M for alanine to 27 mu M for glutamate, Dinitrophenol, carbonyl cyanide m-chlorophenylhydrazone and NaN3 strongly inhibited amino acid uptake, whereas dicyclohexylcarbodiimide. vanadate and the ionophores monensin and nonactin had no effect on the uptake. Both ph dependence and inhibition by protonophores are consistent with a proton symport mechanism for amino acid uptake by P. involutus, Competition studies indicated a broad substrate recognition by the uptake system, which resembles the general amino acid permease of yeast, Dixon plots of the inhibition of glutamate uptake by alanine, lysine and methionine sulfoximine showed that inhibitions were competitive, Tire physiological importance of this transporter for the exchange of nitrogenous compounds between fungal and host plant cells in ectomycorrhizal associations is discussed.
|
|
| 6. |
- Chalot, Mickel, et al.
(författare)
-
Metabolism of [C-14] glutamate and [C-14] glutamine by the ectomycorrhizal fungus Paxillus involutus
- 1994
-
Ingår i: Microbiology. - : Microbiology Society. - 1465-2080 .- 1350-0872. ; 140, s. 1641-1649
-
Tidskriftsartikel (refereegranskat)abstract
- To examine pathways of glutamate and glutamine metabolism in the ectomycorrhizal fungus Paxillus involutus, tracer kinetic experiments were performed using L-[U-C-14]glutamate and L-[U-C-14]glutamine and the enzyme inhibitors methionine sulfoximine (MSX), azaserine (AZA) and aminooxyacetate (AOA). When [C-14]glutamate was supplied to fungal cultures, 25% of the radioactivity of the amino acid fraction was incorporated into glutamine after 5 min feeding, but MSX inhibited incorporation of C-14 into glutamine by 85%, suggesting the rapid operation of glutamine synthetase. Conversely, when P. involutus was fed with [C-14]glutamine, 46% of the label was found in glutamate within 30 min of feeding and AZA inhibited glutamate formation by 90%. Taken together, these data indicate that glutamate synthase (GOGAT) is the major enzyme of glutamine degradation. In addition, the strong inhibition of glutamine utilization by AOA indicates that glutamine catabolism in P. involutus might involve a transamination process as an alternative pathway to GOCAT for glutamine degradation. The high (CO2)-C-14 evolution shows that glutamate and glutamine are further actively consumed as respiratory substrates, being channelled through the tricarboxylic acid (TCA) cycle and oxidized as CO2. It appears that synthesis of amino acid precursors during TCA cycle operation is an essential step far aspartate and alanine synthesis through aminotransferase activities in P. involutus.
|
|
| 7. |
- Chalot, Michel, et al.
(författare)
-
Respiration of [C-14] alanine by the ectomycorrhizal fungus Paxillus involutus
- 1994
-
Ingår i: FEMS Microbiology Letters. - : Oxford University Press (OUP). - 1574-6968 .- 0378-1097. ; 121:1, s. 87-91
-
Tidskriftsartikel (refereegranskat)abstract
- The ectomycorrhizal fungus Paxillus involutus efficiently took up exogenously supplied [C-14]alanine and rapidly converted it to pyruvate, citrate, succinate, fumarate and to CO2, thus providing direct evidence for the utilisation of alanine as a respiratory substrate. [C-14]alanine was further actively metabolised to glutamate, glutamine and aspartate. Exposure to aminooxyacetate completely suppressed (CO2)-C-14 evolution and greatly reduced the flow of carbon from [C-14]alanine to tricarboxylic acid cycle intermediates and amino acids, suggesting that alanine aminotransferase plays a pivotal role in alanine metabolism in Paxillus involutus.
|
|
| 8. |
- Martin, Francis, et al.
(författare)
-
The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis
- 2008
-
Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 452:7183, s. 7-88
-
Tidskriftsartikel (refereegranskat)abstract
- Mycorrhizal symbioses -- the union of roots and soil fungi -- are universal in terrestrial ecosystems and may have been fundamental to land colonization by plants1,2. Boreal, temperate, and montane forests all depend upon ectomycorrhizae1. Identification of the primary factors that regulate symbiotic development and metabolic activity will therefore open the door to understanding the role of 2 ectomycorrhizae in plant development and physiology, allowing the full ecological significance of this symbiosis to be explored. Here, we report the genome sequence of the ectomycorrhizal basidiomycete Laccaria bicolor (Fig. 1) and highlight gene sets involved in rhizosphere colonization and symbiosis. This 65-million-base genome assembly contains ~ 20,000 predicted protein-encoding genes and a very large number of transposons and repeated sequences. We detected unexpected genomic features most notably a battery of effector-type small secreted proteins (SSP) with unknown function, several of which are only expressed in symbiotic tissues. The most highly expressed SSP accumulates in the proliferating hyphae colonizing the host root. The ectomycorrhizae-specific proteins likely play a decisive role in the establishment of the symbiosis. The unexpected observation that the genome of L. bicolor lacks carbohydrate-active enzymes involved in degradation of plant cell walls, but maintains the ability to degrade non-plant cell walls, reveals the dual saprotrophic and biotrophic lifestyle of the mycorrhizal fungus which enables it to grow within both soil and living plant roots. The predicted gene inventory of the L. bicolor genome, therefore, points to previously unknown mechanisms of symbiosis operating in biotrophic mycorrhizal fungi. The availability of this genome provides an unparalleled opportunity to develop a deeper understanding of the processes by which symbionts interact with plants within their ecosystem in order to perform vital functions in the carbon and nitrogen cycles that are fundamental to sustainable plant productivity.
|
|
| 9. |
- Morel, M, et al.
(författare)
-
Identification of genes differentially expressed in extraradical mycelium and ectomycorrhizal roots during Paxillus involutus-Betula pendula ectomycorrhizal symbiosis
- 2005
-
Ingår i: Applied and Environmental Microbiology. - 0099-2240. ; 71:1, s. 382-391
-
Tidskriftsartikel (refereegranskat)abstract
- The development of ectomycorrhizal symbiosis leads to drastic changes in gene expression in both partners. However, little is known about the spatial regulation of symbiosis-regulated genes. Using cDNA array profiling, we compared the levels of expression of fungal genes corresponding to approximately 1,200 expressed sequenced tags in the ectomycorrhizal root tips (ECM) and the connected extraradical mycelium (EM) for the Paxillus involutus-Betuld pendula ectomycorrhizal association grown on peat in a microcosm system. Sixty-five unique genes were found to be differentially expressed in these two fungal compartments. In ECM, a gene coding for a putative phosphatidylserine decarboxylase (Psd) was up-regulated by 24-fold, while genes coding for urea (Dur3) and spermine (Tpo3) transporters were up-regulated 4.1- and 6.2-fold in EM. Moreover, urea was the major nitrogen compound found in EM by gas chromatography-mass spectrometry analysis. These results suggest that (i) there is a spatial difference in the patterns of fungal gene expression between ECM and EM, (ii) urea and polyamine transporters could facilitate the translocation of nitrogen compounds within the EM network, and (iii) fungal Psd may contribute to membrane remodeling during ectomycorrhiza formation.
|
|
