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- Lembrechts, Jonas J., et al.
(författare)
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Global maps of soil temperature
- 2022
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Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 28:9, s. 3110-3144
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Tidskriftsartikel (refereegranskat)abstract
- Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1-km2 resolution for 0–5 and 5–15cm soil depth. These maps were created by calculating the difference (i.e. offset) between in situ soil temperature measurements, based on time series from over 1200 1-km2 pixels (summarized from 8519 unique temperature sensors) across all the world's major terrestrial biomes, and coarse-grained air temperature estimates from ERA5-Land (an atmospheric reanalysis by the European Centre for Medium-Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10°C (mean=3.0±2.1°C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6±2.3°C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (−0.7±2.3°C). The observed substantial and biome-specific offsets emphasize that the projected impacts of climate and climate change on near-surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil-related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications.
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| 4. |
- Lembrechts, Jonas J., et al.
(författare)
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SoilTemp : A global database of near-surface temperature
- 2020
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Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 26:11, s. 6616-6629
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Tidskriftsartikel (refereegranskat)abstract
- Current analyses and predictions of spatially explicit patterns and processes in ecology most often rely on climate data interpolated from standardized weather stations. This interpolated climate data represents long-term average thermal conditions at coarse spatial resolutions only. Hence, many climate-forcing factors that operate at fine spatiotemporal resolutions are overlooked. This is particularly important in relation to effects of observation height (e.g. vegetation, snow and soil characteristics) and in habitats varying in their exposure to radiation, moisture and wind (e.g. topography, radiative forcing or cold-air pooling). Since organisms living close to the ground relate more strongly to these microclimatic conditions than to free-air temperatures, microclimatic ground and near-surface data are needed to provide realistic forecasts of the fate of such organisms under anthropogenic climate change, as well as of the functioning of the ecosystems they live in. To fill this critical gap, we highlight a call for temperature time series submissions to SoilTemp, a geospatial database initiative compiling soil and near-surface temperature data from all over the world. Currently, this database contains time series from 7,538 temperature sensors from 51 countries across all key biomes. The database will pave the way toward an improved global understanding of microclimate and bridge the gap between the available climate data and the climate at fine spatiotemporal resolutions relevant to most organisms and ecosystem processes.
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| 5. |
- Topuz, G., et al.
(författare)
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Carboniferous mafic-ultramafic intrusions in the Eastern Pontides (Pulur Complex): Implications for the source of coeval voluminous granites
- 2023
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Ingår i: Lithos. - : Elsevier BV. - 0024-4937. ; 436-437
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Tidskriftsartikel (refereegranskat)abstract
- This study deals with the age and petrogenesis of mafic-ultramafic intrusions ranging in size from a few meters to 10 km within the Early Carboniferous high-grade gneisses of the Pulur Complex in the Eastern Pontides. The intrusions comprise dunite, wehrlite, gabbronorite, leucogabbro, anorthosite and ilmenite-bearing gabbronorite of cumulus origin, and are crosscut by dikes of ilmenite-bearing gabbronorite, leucogranite and microdiorite. U–Pb dating on zircons from gabbronorite, anorthosite and leucogranite yielded igneous crystallization ages of 322–326 Ma, indicating that the intrusions were emplaced ca. 5–7 Ma after the peak of high-grade metamorphism, and form part of the Late Carboniferous high-volume magmatism in the region. In most cumulate rocks, Cr–Al spinel, olivine and plagioclase were early crystallizing phases, followed by orthopyroxene, clinopyroxene and hornblende. Whole rock geochemical data suggest that wehrlite, gabbronorite, leucogabbro and anorthosite stem from a common magma, and ilmenite-bearing gabbronorite and dikes of leucogranite and microdiorite from different magmas. Application of mineral/melt partition coefficients to trace element compositions of clinopyroxene and hornblende in cumulate rocks suggests that the main cumulate body was derived from middle- to high-K calc-alkaline basic melts, and relatively late ilmenite-bearing gabbronorites from hypersthene-normative Ca-rich melts. All the rock types display radiogenic Sr and Pb isotopic signatures, and unradiogenic Nd isotopic ratios, which are indistinguishable from those of the coeval voluminous high-K calc-alkaline I-type granites in the region; the isotopic ratios are probably related to the metasomatism of the lithospheric mantle by sediment-derived melts. We suggest that the parental melts of the mafic-ultramafic intrusions and those of the high-K calc-alkaline granites were genetically related, and melts of the high-K calc-alkaline granites were probably derived from the melting of newly underplated calc-alkaline basic material at lower crustal depths, that were compositionally comparable to the parental magmas of the mafic-ultramafic intrusions.
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| 6. |
- Walsh, Roddy, et al.
(författare)
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Enhancing rare variant interpretation in inherited arrhythmias through quantitative analysis of consortium disease cohorts and population controls
- 2021
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Ingår i: Genetics in Medicine. - : Nature Publishing Group. - 1098-3600 .- 1530-0366. ; 23:1, s. 47-58
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Tidskriftsartikel (refereegranskat)abstract
- Purpose: Stringent variant interpretation guidelines can lead to high rates of variants of uncertain significance (VUS) for genetically heterogeneous disease like long QT syndrome (LQTS) and Brugada syndrome (BrS). Quantitative and disease-specific customization of American College of Medical Genetics and Genomics/Association for Molecular Pathology (ACMG/AMP) guidelines can address this false negative rate.Methods: We compared rare variant frequencies from 1847 LQTS (KCNQ1/KCNH2/SCN5A) and 3335 BrS (SCN5A) cases from the International LQTS/BrS Genetics Consortia to population-specific gnomAD data and developed disease-specific criteria for ACMG/AMP evidence classes-rarity (PM2/BS1 rules) and case enrichment of individual (PS4) and domain-specific (PM1) variants.Results: Rare SCN5A variant prevalence differed between European (20.8%) and Japanese (8.9%) BrS patients (p = 5.7 x 10(-18)) and diagnosis with spontaneous (28.7%) versus induced (15.8%) Brugada type 1 electrocardiogram (ECG) (p = 1.3 x 10(-13)). Ion channel transmembrane regions and specific N-terminus (KCNH2) and C-terminus (KCNQ1/KCNH2) domains were characterized by high enrichment of case variants and >95% probability of pathogenicity. Applying the customized rules, 17.4% of European BrS and 74.8% of European LQTS cases had (likely) pathogenic variants, compared with estimated diagnostic yields (case excess over gnomAD) of 19.2%/82.1%, reducing VUS prevalence to close to background rare variant frequency.Conclusion: Large case-control data sets enable quantitative implementation of ACMG/AMP guidelines and increased sensitivity for inherited arrhythmia genetic testing.
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