| 1. |
- Deka, P. P., et al.
(författare)
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The MeerKAT Absorption Line Survey (MALS) Data Release. I. Stokes I Image Catalogs at 1-1.4 GHz
- 2024
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Ingår i: Astrophysical Journal, Supplement Series. - 1538-4365 .- 0067-0049. ; 270:2
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Tidskriftsartikel (refereegranskat)abstract
- The MeerKAT Absorption Line Survey (MALS) has observed 391 telescope pointings at the L band (900-1670 MHz) at delta less than or similar to +20 degrees. We present radio continuum images and a catalog of 495,325 (240,321) radio sources detected at a signal-to-noise ratio (S/N) > 5 over an area of 2289 deg(2) (1132 deg(2)) at 1006 MHz (1381 MHz). Every MALS pointing contains a central bright radio source (S 1 GHz greater than or similar to 0.2 Jy). The median spatial resolution is 12 ''(8 ''). The median rms noise away from the pointing center is 25 mu Jy beam(-1) (22 mu Jy beam-1) and is within similar to 15% of the achievable theoretical sensitivity. The flux density scale ratio and astrometric accuracy deduced from multiply observed sources in MALS are <1% (8% scatter) and 1 '', respectively. Through comparisons with NVSS and FIRST at 1.4 GHz, we establish the catalog's accuracy in the flux density scale and astrometry to be better than 6% (15% scatter) and 0.'' 8, respectively. The median flux density offset is higher (9%) for an alternate beam model based on holographic measurements. The MALS radio source counts at 1.4 GHz are in agreement with literature. We estimate spectral indices (alpha) of a subset of 125,621 sources (S/N > 8), confirm the flattening of spectral indices with decreasing flux density, and identify 140 ultra-steep-spectrum (alpha < -1.3) sources as prospective high-z radio galaxies (z > 2). We have identified 1308 variable and 122 transient radio sources comprising primarily active galactic nuclei that demonstrate long-term (26 yr) variability in their observed flux densities. The MALS catalogs and images are publicly available at https://mals.iucaa.in.
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| 2. |
- Emig, K.L., et al.
(författare)
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Discovery of Hydrogen Radio Recombination Lines at z = 0.89 toward PKS 1830-211
- 2023
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Ingår i: Astrophysical Journal. - : American Astronomical Society. - 1538-4357 .- 0004-637X. ; 944:1
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Tidskriftsartikel (refereegranskat)abstract
- We report the detection of stimulated hydrogen radio recombination line (RRL) emission from ionized gas in a z = 0.89 galaxy using 580-1670 MHz observations from the MeerKAT Absorption Line Survey. The RRL emission originates in a galaxy that intercepts and strongly lenses the radio blazar PKS 1830−211 (z = 2.5). This is the second detection of RRLs outside of the local Universe and the first clearly associated with hydrogen. We detect effective H144α (and H163α) transitions at observed frequencies of 1156 (798) MHz by stacking 17 (27) RRLs with 21σ (14σ) significance. The RRL emission contains two main velocity components and is coincident in velocity with H i 21 cm and OH 18 cm absorption. We use the RRL spectral line energy distribution and a Bayesian analysis to constrain the density (n e ) and the volume-averaged path length (ℓ) of the ionized gas. We determine log ( n e ) = 2.0 − 0.7 + 1.0 cm−3 and log ( ℓ ) = − 0.7 − 1.1 + 1.1 pc toward the northeast (NE) lensed image, likely tracing the diffuse thermal phase of the ionized ISM in a thin disk. Toward the southwest (SW) lensed image, we determine log ( n e ) = 3.2 − 1.0 + 0.4 cm−3 and log ( ℓ ) = − 2.7 − 0.2 + 1.8 pc, tracing gas that is more reminiscent of H scii regions. We estimate a star formation (surface density) rate of ΣSFR ∼ 0.6 M ⊙ yr−1 kpc−2 or SFR ∼ 50 M ⊙ yr−1, consistent with a star-forming main-sequence galaxy of M ⋆ ∼ 1011 M ⊙. The discovery presented here opens up the possibility of studying ionized gas at high redshifts using RRL observations from current and future (e.g., SKA and ngVLA) radio facilities.
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| 3. |
- Combes, Françoise, et al.
(författare)
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PKS 1413+135: OH and H i at z = 0.247 with MeerKAT
- 2023
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Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 671
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Tidskriftsartikel (refereegranskat)abstract
- The BL Lac object PKS 1413+135 was observed by the Large Survey Project MeerKAT Absorption Line Survey (MALS) in the L-band, at 1139 MHz and 12931379 MHz, targeting the HI and OH lines in absorption at z=0.24671. The radio continuum might come from the nucleus of the absorbing galaxy or from a background object at redshift lower than 0.5, as suggested by the absence of gravitational images. The HI absorption line is detected at a high signal-To-noise ratio, with a narrow central component, and with a red wing, confirming previous results. The OH 1720 MHz line is clearly detected in (maser) emission, peaking at a velocity shifted by-10 to-15 km s-1 with respect to the HI peak. The 1612 MHz line is lost due to radio frequency interference. The OH 1667 MHz main line is tentatively detected in absorption, but not the 1665 MHz line. Over 30 years a high variability is observed in optical depths, due to the rapid changes of the line of sight caused by the superluminal motions of the radio knots. The HI line has varied by 20% in depth, while the OH-1720 MHz depth has varied by a factor of ∼3. The position of the central velocity and the widths also varied. The absorbing galaxy is an early-Type spiral (maybe S0) seen edge-on, with a prominent dust lane, covering the whole disk. Given the measured mass concentration and the radio continuum size at centimeter wavelengths (100 mas corresponding to 400 pc at z=0.25), the width of the absorption lines from the nuclear regions are expected up to 250 km s-1. The narrowness of the observed lines (< 15 km s-1) suggests that the absorption comes from an outer gas ring, as frequently observed in S0 galaxies. The millimetric lines are even narrower (< 1 km s-1), which corresponds to the continuum size restricted to the core. The radio core is covered by individual 1 pc molecular clouds, whose column density is a few 1022 cm-2, which is compatible with the gas screen detected in X-rays.
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| 4. |
- Lindahl, Johanna, et al.
(författare)
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Brucellosis in India : results of a collaborative workshop to define One Health priorities
- 2020
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Ingår i: Tropical Animal Health and Production. - : Springer Science and Business Media LLC. - 0049-4747 .- 1573-7438. ; 52, s. 387-396
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Tidskriftsartikel (refereegranskat)abstract
- Brucellosis is an important zoonosis worldwide. In livestock, it frequently causes chronic disease with reproductive failures that contribute to production losses, and in humans, it causes an often-chronic febrile illness that is frequently underdiagnosed in many low- and middle-income countries, including India. India has one of the largest ruminant populations in the world, and brucellosis is endemic in the country in both humans and animals. In November 2017, the International Livestock Research Institute invited experts from government, national research institutes, universities, and different international organizations to a one-day meeting to set priorities towards a "One Health" control strategy for brucellosis in India. Using a risk prioritization exercise followed by discussions, the meeting agreed on the following priorities: collaboration (transboundary and transdisciplinary); collection of more epidemiological evidence in humans, cattle, and in small ruminants (which have been neglected in past research); Economic impact studies, including cost effectiveness of control programmes; livestock vaccination, including national facilities for securing vaccines for the cattle population; management of infected animals (with the ban on bovine slaughter, alternatives such as sanctuaries must be explored); laboratory capacities and diagnostics (quality must be assured and better rapid tests developed); and increased awareness, making farmers, health workers, and the general public more aware of risks of brucellosis and zoonoses in general. Overall, the meeting participants agreed that brucellosis control will be challenging in India, but with collaboration to address the priority areas listed here, it could be possible.
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| 5. |
- Wagenveld, Jonah D., et al.
(författare)
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The MeerKAT Absorption Line Survey: Homogeneous continuum catalogues towards a measurement of the cosmic radio dipole
- 2023
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Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 673
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Tidskriftsartikel (refereegranskat)abstract
- The number counts of homogeneous samples of radio sources are a tried and true method of probing the large-scale structure of the Universe, as most radio sources outside the Galactic plane are at cosmological distances. As such, they are expected to trace the cosmic radio dipole, an anisotropy analogous to the dipole seen in the cosmic microwave background (CMB). Results have shown that although the cosmic radio dipole matches the direction of the CMB dipole, it has a significantly larger amplitude. This unexplained result challenges our assumption of the Universe being isotropic, which can have large repercussions for the current cosmological paradigm. Though significant measurements have been made, sensitivity to the radio dipole is generally hampered by systematic effects that can cause large biases in the measurement. Here we assess these systematics with data from the MeerKAT Absorption Line Survey (MALS), a blind search for absorption lines with pointings centred on bright radio sources. With the sensitivity and field of view of MeerKAT, thousands of sources are observed in each pointing, allowing for the possibility of measuring the cosmic radio dipole given enough pointings. We present the analysis of ten MALS pointings, focusing on systematic effects that could lead to an inhomogeneous catalogue. We describe the calibration and creation of full band continuum images and catalogues, producing a combined catalogue containing 16 307 sources and covering 37.5 square degrees of sky down to a sensitivity of 10 μJy beam-1. We measure the completeness, purity, and flux recovery statistics for these catalogues using simulated data. We investigate different source populations in the catalogues by looking at flux densities and spectral indices and how they might influence source counts. Using the noise characteristics of the pointings, we find global measures that can be used to correct for the incompleteness of the catalogue, producing corrected number counts down to 100-200 μJy. We show that we can homogenise the catalogues and properly account for systematic effects. We determine that we can measure the dipole to 3significance with 100 MALS pointings.
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| 6. |
- Nunes, P., et al.
(författare)
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The leaf of Agapanthus africanus (L.) Hoffm. : A physical-chemical perspective of terrestrialization in the cuticle
- 2023
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Ingår i: Environmental and Experimental Botany. - : Elsevier BV. - 0098-8472 .- 1873-7307. ; 208
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Tidskriftsartikel (refereegranskat)abstract
- Although Agapanthus africanus (L.) Hoffm. is one of the most popular ornamental species in both hemispheres, it has an extremely restricted wild occurrence (Cape province, South Africa). This contradiction between gener-alized ornamental application and natural distribution was the basis for the analytical approach adopted in the present work. We hypothesized that characteristic features of the cuticular waxes were adopted by this species to help it cope with severe dehydration associated with marine salinity on account of the short distance of the wild populations to the sea. A comprehensive morpho-anatomical, histological and physical-chemical analysis was performed on the epicuticular and intracuticular layers of the adaxial and abaxial surfaces of leaves of specimens of A. africanus. The adaxial epicuticular surface is hydrophilic and the abaxial epicuticular surface exhibits globally hydrophobic behavior. The main chemical compounds detected in the wax layers of both surfaces of the leaf are the short-chain monocaprylin monoglyceride (C8), and very long-chain 1-hexacosanol (C26) and 1-octa-cosanol (C28) alcohols. While monocaprylin is particularly abundant in the intracuticular layers, the epicuticular adaxial surface revealed the highest concentration of both alcohols. We demonstrate that the smart combination of these two classes of molecules with opposite water affinity endows the A. africanus leaf cuticle with a unique water management system combining the efficient entrapment of water in the disordered alpha-gel phase formed by monocaprylin and the high resistance to water transport provided by ordered domains composed of tightly packed, all-trans alkyl chains of the above pair of alcohols. The remarkable structural similarity existing between the monocaprylin alpha-gel and the mucilage of algae is an evidence of the terrestrialization process.
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| 7. |
- Kumar Dey, Tushar, et al.
(författare)
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Molecular Characterization of Methicillin-Resistant Staphylococci from the Dairy Value Chain in Two Indian States
- 2023
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Ingår i: Pathogens. - : MDPI. - 2076-0817. ; 12:2
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Tidskriftsartikel (refereegranskat)abstract
- Bovine milk and milk products may contain pathogens, antimicrobial resistant bacteria, and antibiotic residues that could harm consumers. We analyzed 282 gram-positive isolates from milk samples from dairy farmers and vendors in Haryana and Assam, India, to assess the prevalence of methicillin-resistant staphylococci using microbiological tests, antibiotic susceptibility testing, and genotyping by PCR. The prevalence of genotypic methicillin resistance in isolates from raw milk samples was 5% [95% confidence interval, CI (3-8)], with 7% [CI (3-10)] in Haryana, in contrast to 2% [CI (0.2-6)] in Assam. The prevalence was the same in isolates from milk samples collected from farmers [5% (n = 6), CI (2-11)] and vendors [5% (n = 7), CI (2-10)]. Methicillin resistance was also observed in 15% of the isolates from pasteurized milk [(n = 3), CI (3-38)]. Two staphylococci harboring a novel mecC gene were identified for the first time in Indian dairy products. The only SCCmec type identified was Type V. The staphylococci with the mecA (n = 11) gene in raw milk were commonly resistant to oxacillin [92%, CI (59-100)] and cefoxitin [74%, CI (39-94)], while the isolates with mecC (n = 2) were resistant to oxacillin (100%) only. All the staphylococci with the mecA (n = 3) gene in pasteurized milk were resistant to both oxacillin and cefoxitin. Our results provided evidence that methicillin-resistant staphylococci occur in dairy products in India with potential public health implications. The state with more intensive dairy systems (Haryana) had higher levels of methicillin-resistant bacteria in milk.
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| 8. |
- Leahy, Eithne, et al.
(författare)
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Leptospira interrogans Serovar Hardjo Seroprevalence and Farming Practices on Small-Scale Dairy Farms in North Eastern India; Insights Gained from a Cross-Sectional Study
- 2021
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Ingår i: Dairy. - : MDPI AG. - 2624-862X. ; 2:2, s. 231-241
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Tidskriftsartikel (refereegranskat)abstract
- Leptospirosis is a zoonotic disease of major public health concern in India. Bovines play an important role in maintaining and transmitting this disease and proximity between dairy cows and humans makes the dairy cow-human nexus a transmission route of public health interest, yet one currently under-examined in North Eastern India. We report a cross-sectional survey carried out on small-scale dairy farms in the states of Assam and Bihar in North Eastern India investigating seroprevalence for Leptospira interrogans serovar Hardjo, the most common pathogenic serovar reported in cattle worldwide. Higher seroprevalence was reported on dairy farms in Bihar 4.5% (95% CI 2.6–7.5%) than in Assam 1.2% (95% CI 0.42–3.6%), but overall seroprevalence levels were low. The study is the first indication of leptospirosis circulating in small-scale dairy farms in these states. To correlate farming practices with zoonotic risk, we combined results from a dairy farmer questionnaire with cow seroprevalence. However, low seroprevalence levels found in this study made the identification of risk factors difficult. Nevertheless, poor farming practices around hygiene and biosecurity on dairy farms have been highlighted. Implementing simple measures could mitigate environmental contamination, and therefore, reduce the risk of Leptospira interrogans, and other zoonoses transmission, at the animal-environment-human interface.
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| 9. |
- Woo, Daniel, et al.
(författare)
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Meta-Analysis of Genome-Wide Association Studies Identifies 1q22 as a Susceptibility Locus for Intracerebral Hemorrhage.
- 2014
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Ingår i: American Journal of Human Genetics. - : Elsevier BV. - 0002-9297. ; 94:4, s. 511-521
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Tidskriftsartikel (refereegranskat)abstract
- Intracerebral hemorrhage (ICH) is the stroke subtype with the worst prognosis and has no established acute treatment. ICH is classified as lobar or nonlobar based on the location of ruptured blood vessels within the brain. These different locations also signal different underlying vascular pathologies. Heritability estimates indicate a substantial genetic contribution to risk of ICH in both locations. We report a genome-wide association study of this condition that meta-analyzed data from six studies that enrolled individuals of European ancestry. Case subjects were ascertained by neurologists blinded to genotype data and classified as lobar or nonlobar based on brain computed tomography. ICH-free control subjects were sampled from ambulatory clinics or random digit dialing. Replication of signals identified in the discovery cohort with p < 1 × 10(-6) was pursued in an independent multiethnic sample utilizing both direct and genome-wide genotyping. The discovery phase included a case cohort of 1,545 individuals (664 lobar and 881 nonlobar cases) and a control cohort of 1,481 individuals and identified two susceptibility loci: for lobar ICH, chromosomal region 12q21.1 (rs11179580, odds ratio [OR] = 1.56, p = 7.0 × 10(-8)); and for nonlobar ICH, chromosomal region 1q22 (rs2984613, OR = 1.44, p = 1.6 × 10(-8)). The replication included a case cohort of 1,681 individuals (484 lobar and 1,194 nonlobar cases) and a control cohort of 2,261 individuals and corroborated the association for 1q22 (p = 6.5 × 10(-4); meta-analysis p = 2.2 × 10(-10)) but not for 12q21.1 (p = 0.55; meta-analysis p = 2.6 × 10(-5)). These results demonstrate biological heterogeneity across ICH subtypes and highlight the importance of ascertaining ICH cases accordingly.
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