| 1. |
- Klionsky, Daniel J., et al.
(författare)
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Guidelines for the use and interpretation of assays for monitoring autophagy
- 2012
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Ingår i: Autophagy. - : Informa UK Limited. - 1554-8635 .- 1554-8627. ; 8:4, s. 445-544
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Forskningsöversikt (refereegranskat)abstract
- In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.
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| 2. |
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| 3. |
- Fan, Qunping, et al.
(författare)
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Unidirectional Sidechain Engineering to Construct Dual-Asymmetric Acceptors for 19.23 % Efficiency Organic Solar Cells with Low Energy Loss and Efficient Charge Transfer
- 2023
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Ingår i: Angewandte Chemie International Edition. - : WILEY-V C H VERLAG GMBH. - 1433-7851 .- 1521-3773. ; 62:36
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Tidskriftsartikel (refereegranskat)abstract
- Achieving both high open-circuit voltage (V-oc) and short-circuit current density (J(sc)) to boost power-conversion efficiency (PCE) is a major challenge for organic solar cells (OSCs), wherein high energy loss (E-loss) and inefficient charge transfer usually take place. Here, three new Y-series acceptors of mono-asymmetric asy-YC11 and dual-asymmetric bi-asy-YC9 and bi-asy-YC12 are developed. They share the same asymmetric D(1)AD(2) (D-1=thieno[3,2-b]thiophene and D-2=selenopheno[3,2-b]thiophene) fused-core but have different unidirectional sidechain on D-1 side, allowing fine-tuned molecular properties, such as intermolecular interaction, packing pattern, and crystallinity. Among the binary blends, the PM6 : bi-asy-YC12 one has better morphology with appropriate phase separation and higher order packing than the PM6 : asy-YC9 and PM6 : bi-asy-YC11 ones. Therefore, the PM6 : bi-asy-YC12-based OSCs offer a higher PCE of 17.16 % with both high V-oc and J(sc), due to the reduced E-loss and efficient charge transfer properties. Inspired by the high V-oc and strong NIR-absorption, bi-asy-YC12 is introduced into efficient binary PM6 : L8-BO to construct ternary OSCs. Thanks to the broadened absorption, optimized morphology, and furtherly minimized E-loss, the PM6 : L8-BO : bi-asy-YC12-based OSCs achieve a champion PCE of 19.23 %, which is one of the highest efficiencies among these annealing-free devices. Our developed unidirectional sidechain engineering for constructing bi-asymmetric Y-series acceptors provides an approach to boost PCE of OSCs.
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| 4. |
- Gao, Jianqiang, et al.
(författare)
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An ADAS with better driver satisfaction under rear-end near-crash scenarios: A spatio-temporal graph transformer-based prediction framework of evasive behavior and collision risk
- 2024
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Ingår i: Transportation Research, Part C: Emerging Technologies. - 0968-090X. ; 159
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Tidskriftsartikel (refereegranskat)abstract
- Current advanced driver assistance systems (ADASs) do not consider drivers’ preferences of evasive behavior types and risk levels under rear-end near-crash scenarios, which undermines driver satisfaction, trust, and use of ADASs. Additionally, spatio-temporal interactions between vehicles are not fully involved in current evasive behavior prediction models, and the influence of evasive behavior is ignored while predicting collision risk. To address these issues, this study aims to propose an ADAS with better driver satisfaction under rear-end near-crash scenarios by establishing a spatio-temporal graph transformer-based prediction framework of evasive behavior and collision risk. A total of 822 evasive events are extracted from 108,000 real vehicle trajectories on highways, and variables from three sources (i.e., road environment features, evading vehicle features, and interactive behavior features) are used to construct rear-end near-crash scenario knowledge graphs (RNSKGs). By utilizing RNSKGs embedding and multi-head self-attention mechanism, spatio-temporal graph transformer networks can effectively capture the spatio-temporal interactions between vehicles. The results show that the prediction accuracy of evasive behavior (i.e., braking-only or braking and steering) and collision risk (lower, medium, or higher risk) is 96.34% and 92.12%, respectively, superior to other commonly-used methods. After including the selected evasive behavior in predicting collision risk, the overall accuracy increases by 10.91%. Then, an autonomous evasive takeover system (AET) based on the prediction framework is developed, and its effectiveness and satisfaction are verified by driving simulation experiments. According to the self-reported data of participants, the safety, comfort, usability, and acceptability of AET proposed in this study all significantly outperform existing autonomous takeover systems (i.e., autonomous emergency braking and autonomous emergency steering). The findings of this study might contribute to the optimization of ADASs, the enhancement of mutual understanding between ADASs and human drivers, and the improvement of active driving safety.
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| 5. |
- Gao, Xindi, et al.
(författare)
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Cryptococcal Hsf3 controls intramitochondrial ROS homeostasis by regulating the respiratory process
- 2022
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Ingår i: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 13:1
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Tidskriftsartikel (refereegranskat)abstract
- Mitochondrial quality control prevents accumulation of intramitochondrial-derived reactive oxygen species (mtROS), thereby protecting cells against DNA damage, genome instability, and programmed cell death. However, underlying mechanisms are incompletely understood, particularly in fungal species. Here, we show that Cryptococcus neoformans heat shock factor 3 (CnHsf3) exhibits an atypical function in regulating mtROS independent of the unfolded protein response. CnHsf3 acts in nuclei and mitochondria, and nuclear- and mitochondrial-targeting signals are required for its organelle-specific functions. It represses the expression of genes involved in the tricarboxylic acid cycle while promoting expression of genes involved in electron transfer chain. In addition, CnHsf3 responds to multiple intramitochondrial stresses; this response is mediated by oxidation of the cysteine residue on its DNA binding domain, which enhances DNA binding. Our results reveal a function of HSF proteins in regulating mtROS homeostasis that is independent of the unfolded protein response.
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| 6. |
- Zhang, Guoqing, et al.
(författare)
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Extensive and drastically different alpine lake changes on Asia's high plateaus during the past four decades
- 2017
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Ingår i: Geophysical Research Letters. - 0094-8276. ; 44:1, s. 252-260
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Tidskriftsartikel (refereegranskat)abstract
- Asia's high plateaus are sensitive to climate change and have been experiencing rapid warming over the past few decades. We found 99 new lakes and extensive lake expansion on the Tibetan Plateau during the last four decades, 1970–2013, due to increased precipitation and cryospheric contributions to its water balance. This contrasts with disappearing lakes and drastic shrinkage of lake areas on the adjacent Mongolian Plateau: 208 lakes disappeared and 75% of the remaining lakes have shrunk. We detected a statistically significant coincidental timing of lake area changes in both plateaus, associated with the climate regime shift that occurred during 1997/1998. This distinct change in 1997/1998 is thought to be driven by large-scale atmospheric circulation changes in response to climate warming. Our findings reveal that these two adjacent plateaus have been changing in opposite directions in response to climate change. These findings shed light on the complex role of the regional climate and water cycles, and provide useful information for ecological and water resource planning in these fragile landscapes.
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| 7. |
- Zhang, Shuangshuang, et al.
(författare)
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Discovery of carbon-based strongest and hardest amorphous material
- 2022
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Ingår i: National Science Review. - : Oxford University Press. - 2095-5138 .- 2053-714X. ; 9:1
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Tidskriftsartikel (refereegranskat)abstract
- Carbon is one of the most fascinating elements due to its structurally diverse allotropic forms stemming from its bonding varieties (sp, sp2, and sp3). Exploring new forms of carbon has always been the eternal theme of scientific research. Herein, we report the amorphous (AM) carbon materials with high fraction of sp3 bonding recovered from compression of fullerene C60 under high pressure and high temperature previously unexplored. Analysis of photoluminescence and absorption spectra demonstrates that they are semiconducting with a bandgap range of 1.5–2.2 eV, comparable to that of widely used amorphous silicon. Comprehensive mechanical tests demonstrate that the synthesized AM-III carbon is the hardest and strongest amorphous material known so far, which can scratch diamond crystal and approach its strength. The produced AM carbon materials combine outstanding mechanical and electronic properties, and may potentially be used in photovoltaic applications that require ultrahigh strength and wear resistance.
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| 8. |
- Cheng, Huailei, et al.
(författare)
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Truck platooning reshapes greenhouse gas emissions of the integrated vehicle-road infrastructure system
- 2023
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Ingår i: Nature Communications. - 2041-1723 .- 2041-1723. ; 14:1
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Tidskriftsartikel (refereegranskat)abstract
- Reducing greenhouse gas emissions has turned into a pillar of climate change mitigation. Truck platooning is proposed as a strategy to lower emissions from vehicles on roads. However, the potential interactive impacts of this technology on road infrastructure emissions remain unclear. Here, we evaluate the decarbonization effects of truck platooning on the integrated vehicle-road system at a large-scale road network level, spanning 1457 road sections across North America. We show that truck platooning decreases emissions induced by truck operations, but it degrades faster the durability of road infrastructure and leads to a 27.9% rise in road emissions due to more frequent maintenance work. Overall, truck platooning results in a 5.1% emission reduction of the integrated vehicle-road system. In contrast to the benefits of emission reduction, truck platooning leads to additional financial burdens on car users and transportation agencies, calling for the consideration of tradeoffs between emissions and costs and between agencies and users. Our research provides insights into the potential applications of truck platooning to mitigate climate change.
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| 9. |
- Cui, Shaohua, et al.
(författare)
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Adaptive Collision-Free Trajectory Tracking Control for String Stable Bidirectional Platoons
- 2023
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Ingår i: IEEE Transactions on Intelligent Transportation Systems. - 1524-9050 .- 1558-0016. ; 24:11, s. 12141-12153
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Tidskriftsartikel (refereegranskat)abstract
- Autonomous vehicle (AV) platoons, especially those with the bidirectional communication topology, have significant practical value, as they not only increase link capacity and reduce vehicle energy consumption, but also reduce the consumption of communication resources. Small gaps between AVs in a platoon easily lead to emergency braking or even collisions between consecutive AVs. This paper applies barrier Lyapunov functions to collision avoidance between AVs in a bidirectional platoon during trajectory tracking. Based on backstepping technique, an adaptive collision-free platoon trajectory tracking control algorithm is developed to distributedly design control laws for each AV in the platoon. The control algorithm does not need to introduce additional car-following models to simulate AV driving, and only needs to integrate the position trajectories of consecutive AVs to avoid inter-vehicle collisions. Two sign functions are introduced into the control laws of each AV to ensure strong string stability for bidirectional AV platoons. Moreover, uncertainties and external disturbances in vehicle motion are effectively compensated by introducing adaptation laws. Strong string stability is rigorously proved. CarSIM-based comparison simulations verify the effectiveness of the proposed control algorithm in avoiding inter-vehicle collisions, compensating for uncertainties in vehicle motion, and suppressing the amplification of spacing errors along the platoon.
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| 10. |
- Cui, Shaohua, 1995, et al.
(författare)
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Delay-throughput tradeoffs for signalized networks with finite queue capacity
- 2024
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Ingår i: Transportation Research Part B: Methodological. - 0191-2615. ; 180
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Tidskriftsartikel (refereegranskat)abstract
- Network-level adaptive signal control is an effective way to reduce delay and increase network throughput. However, in the face of asymmetric exogenous demand, the increase of network performance via adaptive signal control alone is at the expense of service fairness (i.e., phase actuation fairness and network resource utilization fairness). In addition, for oversaturated networks, arbitrary adaptive signal control seems to have little effect on improving network performance. Therefore, under the assumption that the mean routing proportions/turn ratios of vehicles at intersections are fixed, this study investigates the problem of optimally allocating input rates to entry links and simultaneously finding a stabilizing signal control policy with phase fairness. We model the stochastic optimization problem of maximizing network throughput subject to network stability (i.e., all queue lengths have finite means) and average phase actuation constraints to bridge the gap between stochastic network stability control and convex optimization. Moreover, we further propose a micro-level joint admission and bounded signal control algorithm to achieve network stability and throughput optimization simultaneously. Joint control is implemented in a fully decomposed and distributed manner. For any arrival rate, joint control provably achieves network throughput within O(1/V) of optimality while trading off average delay with O(V), where V is an adjusted control parameter. Through a comparative simulation of a real network with 256 O-D pairs, the proposed joint control keeps network throughput at maximum, guarantees service fairness, and fully utilizes network capacity (i.e., increases network throughput by 17.54%).
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