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| 2. |
- Camino-Serrano, Marta, et al.
(författare)
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ORCHIDEE-SOM : Modeling soil organic carbon (SOC) and dissolved organic carbon (DOC) dynamics along vertical soil profiles in Europe
- 2018
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Ingår i: Geoscientific Model Development. - : Copernicus GmbH. - 1991-959X .- 1991-9603. ; 11:3, s. 937-957
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Tidskriftsartikel (refereegranskat)abstract
- Current Land Surface Models (LSMs) typically represent soils in a very simplistic way, assuming soil organic carbon (SOC) as a bulk, thus impeding a correct representation of deep soil carbon dynamics. Moreover, LSMs generally neglect the production and export of dissolved organic carbon (DOC) from soils to rivers, leading to overestimations of the potential carbon sequestration on land. These common oversimplified processing of SOC in LSMs is partly responsible for the large uncertainty in the predictions of the soil carbon response to climate change. In this study, we present a new soil carbon module called ORCHIDEE-SOM, embedded within the land surface model ORCHIDEE, which is able to reproduce the DOC and SOC dynamics in a vertically discretized soil to two meters. The model includes processes of biological production and consumption of SOC and DOC, DOC adsorption on- and desorption from soil minerals, diffusion of SOC and DOC and DOC transport with water through and out of the soils to rivers. We evaluated ORCHIDEE-SOM against observations of DOC concentrations and SOC stocks from four European sites with different vegetation covers: a coniferous forest, a deciduous forest, a grassland and a cropland. The model was able to reproduce the SOC stocks along their vertical profiles at the four sites and the DOC concentrations within the range of measurements, with the exception of the DOC concentrations in the upper soil horizon at the coniferous forest. However, the model was not able to fully capture the temporal dynamics of DOC concentrations. Further model improvements should focus on a plant- and depth- dependent parameterization of the new input model parameters, such as the decomposition times of DOC and the microbial carbon use efficiency. We suggest that this new soil module, when parameterized for global simulations, will improve the representation of the global carbon cycle in LSMs, thus helping to constrain the predictions of the future SOC response to global warming.
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| 3. |
- Ekberg, Anna, et al.
(författare)
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Rhizospheric influence on soil respiration and decomposition in a temperate Norway spruce stand
- 2007
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Ingår i: Soil Biology & Biochemistry. - : Elsevier BV. - 0038-0717. ; 39:8, s. 2103-2110
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Tidskriftsartikel (refereegranskat)abstract
- Assessments of terrestrial carbon fluxes require a thorough understanding of links between primary production, soil respiration and carbon loss through drainage. In this study, stem girdling was used to terminate autotrophic soil respiration including rhizosphere respiration and root exudation in a temperate Norway spruce stand. Rates of soil respiration and dissolved organic carbon (DOC) formation were measured in the second year after girdling, comparing an intact plant rhizosphere continuum with an exclusive decomposer system. The molecular and isotopic composition of DOC in the soil solution was analysed with a coupled Py-GC/MS-C-IRMS system to distinguish between the carbon sources of dissolved carbon. Pyrolysis products were grouped according to their precursor origins: polysaccharides, proteins or of mixed origin (mainly derivates of lignins and proteins). When dead roots became available for decomposition, rates of heterotrophic soil respiration in girdling plots peaked at 6.5 mu mol m(-2) s(-1), comparable to peak rates of total soil respiration (autotrophic and heterotrophic) in control plots, 6.1 mu mol m(-2) s(-1). A significant response of soil respiration to temperature was found in control plots only, showing that an unlimiting supply of organic substrates for microbial respiration may mask any temperature effects. The enhanced decomposition in girdled plots was further supported by the isotopic composition of DOC in soil solution; all three precursor groups became isotopically enriched as the growing season progressed (polysaccharides by 2.3 parts per thousand, proteins by 1.9 parts per thousand, mixed origin group by 2.2 parts per thousand). This indicates a trophic level shift due to incorporation of organic substrate into the microbial food chain. In the control plots' mixed origin fraction, the isotopic composition changed over time from a signature resembling that of lignin (-28.9 parts per thousand) to one similar of the protein fraction (-25.7 parts per thousand). Significant temporal changes of structural DOC composition occurred in the girdling plots only. These results suggest that changes in the microbial community and in decomposition rates occurred in both girdled and control plots in the following ways: (i) increased substrate availability (dead roots) gave rise to generally enhanced performance of the decomposer community in girdled plots, (ii) root-derived exudates probably contributed to enhanced decomposition of recalcitrant lignin in the control plots and (iii) the structural composition of DOC seemed to be more a result of decomposition than of plant root exudation in all plots. (C) 2007 Elsevier Ltd. All rights reserved.
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| 4. |
- Gavazov, Konstantin, 1983-, et al.
(författare)
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Winter ecology of a subalpine grassland : Effects of snow removal on soil respiration, microbial structure and function
- 2017
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Ingår i: Science of the Total Environment. - : Elsevier. - 0048-9697 .- 1879-1026. ; 590-591, s. 316-324
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Tidskriftsartikel (refereegranskat)abstract
- Seasonal snow cover provides essential insulation for mountain ecosystems, but expected changes in precipitation patterns and snow cover duration due to global warming can influence the activity of soil microbial communities. In turn, these changes have the potential to create new dynamics of soil organic matter cycling. To assess the effects of experimental snow removal and advanced spring conditions on soil carbon (C) and nitrogen (N) dynamics, and on the biomass and structure of soil microbial communities, we performed an in situ study in a subalpine grassland in the Austrian Alps, in conjunction with soil incubations under controlled conditions. We found substantial winter C-mineralisation and high accumulation of inorganic and organic N in the topsoil, peaking at snowmelt. Soil microbial biomass doubled under the snow, paralleled by a fivefold increase in its C:N ratio, but no apparent change in its bacteria-dominated community structure. Snow removal led to a series of mild freeze-thaw cycles, which had minor effects on in situ soil CO2 production and N mineralisation. Incubated soil under advanced spring conditions, however, revealed an impaired microbial metabolism shortly after snow removal, characterised by a limited capacity for C-mineralisation of both fresh plant-derived substrates and existing soil organic matter (SOM), leading to reduced priming effects. This effect was transient and the observed recovery in microbial respiration and SOM priming towards the end of the winter season indicated microbial resilience to short-lived freeze-thaw disturbance under field conditions. Bacteria showed a higher potential for uptake of plant-derived C substrates during this recovery phase. The observed temporary loss in microbial C-mineralisation capacity and the promotion of bacteria over fungi can likely impede winter SOM cycling in mountain grasslands under recurrent winter climate change events, with plausible implications for soil nutrient availability and plant-soil interactions.
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| 5. |
- Gayantha, Kasun, et al.
(författare)
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Mid-Late Holocene Sub-Millennial Scale Inverse Trends of South Asian Summer and Winter Monsoons in Sri Lanka
- 2021
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Ingår i: Frontiers in Earth Science. - : Frontiers Media SA. - 2296-6463. ; 9
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Tidskriftsartikel (refereegranskat)abstract
- The South Asian Monsoon (SAM) brings precipitation crucial for agriculture across the densely populated region of South Asia. Identifying the key long-term drivers of the SAM is essential to improve the predictability of future monsoonal trends in the context of current global climate scenarios and increasingly frequent drought and flooding events in this part of the world. Here, we reconstruct similar to 6000 years of climatic and environmental history of the South Asian summer monsoon-fed Bolgoda South Lake and the Horton Plains, and the winter monsoon-fed Panama lagoon, in Sri Lanka to better understand monsoonal operation over this island and its connection to broader climate systems. Multiple proxies (diagnostic biomarkers, hydrogen and carbon isotopes of individual n-alkane, grain size, and Zr/Rb elemental ratio) indicate a sub-millennial scale decreasing trend of summer monsoon rainfall in the wet zone of Sri Lanka alongside an increasing trend of winter monsoon rainfall in the dry zone during the last similar to 6000 years. We also observed multi-centennial scale arid events in the Bolgoda South Lake and Horton Plains records at similar to 3,500 and similar to 1,000 cal years BP. Inverse monsoonal behavior during the mid- and late Holocene seems to be led by the southward migration of the mean latitudinal position of ITCZ, induced by varying solar energy distribution between the Northern and Southern hemispheres due to Earths processional cycle. Our observations are broadly supported by existing paleoclimatic records from the Indian sub-continent, but abrupt arid phases are asynchronous in the regional records. In addition, these short-term arid conditions do not show systematic correlations with the different modes of climate variables known to have teleconnections with the Indian Ocean monsoon.
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| 6. |
- Gayantha, Kasun, et al.
(författare)
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Reconstruction of the Late Holocene climate and environmental history from North Bolgoda Lake, Sri Lanka, using lipid biomarkers and pollen records
- 2020
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Ingår i: Journal of Quaternary Science. - : WILEY. - 0267-8179 .- 1099-1417. ; 35:4, s. 514-525
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Tidskriftsartikel (refereegranskat)abstract
- The catastrophic impact and unpredictability of the Indian Ocean Monsoon (IOM) over South Asia are evident from devastating floods, mudslides and droughts in one of the most densely populated regions of the globe. However, our understanding as to how the IOM has varied in the past, as well as its impact on local environments, remains limited. This is particularly the case for Sri Lanka, where erosional landscapes have limited the availability of well-stratified, high-resolution terrestrial archives. Here, we present novel data from an undisturbed sediment core retrieved from the coastal Bolgoda Lake. This includes the presentation of a revised Late Holocene age model as well as an innovative combination of pollen, source-specific biomarkers, and compound-specific stable carbon isotopes of n-alkanes to reconstruct the shifts in precipitation, salinity and vegetation cover. Our record documents variable climate between 3000 years and the present, with arid conditions c. 2334 and 2067 cal a bp. This extreme dry period was preceded and followed by more wet conditions. The high-resolution palaeoenvironmental reconstruction fills a major gap in our knowledge on the ramifications of IOM shifts across South Asia and provides insights during a time of major redistribution of dense human settlements across Sri Lanka.
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| 7. |
- Hawkes, Jeffrey A., et al.
(författare)
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An international laboratory comparison of dissolved organic matter composition by high resolution mass spectrometry : Are we getting the same answer?
- 2020
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Ingår i: Limnology and Oceanography. - : Wiley. - 1541-5856. ; 18:6, s. 235-258
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Tidskriftsartikel (refereegranskat)abstract
- High-resolution mass spectrometry (HRMS) has become a vital tool for dissolved organic matter (DOM) characterization. The upward trend in HRMS analysis of DOM presents challenges in data comparison and interpretation among laboratories operating instruments with differing performance and user operating conditions. It is therefore essential that the community establishes metric ranges and compositional trends for data comparison with reference samples so that data can be robustly compared among research groups. To this end, four identically prepared DOM samples were each measured by 16 laboratories, using 17 commercially purchased instruments, using positive-ion and negative-ion mode electrospray ionization (ESI) HRMS analyses. The instruments identified similar to 1000 common ions in both negative- and positive-ion modes over a wide range of m/z values and chemical space, as determined by van Krevelen diagrams. Calculated metrics of abundance-weighted average indices (H/C, O/C, aromaticity and m/z) of the commonly detected ions showed that hydrogen saturation and aromaticity were consistent for each reference sample across the instruments, while average mass and oxygenation were more affected by differences in instrument type and settings. In this paper we present 32 metric values for future benchmarking. The metric values were obtained for the four different parameters from four samples in two ionization modes and can be used in future work to evaluate the performance of HRMS instruments.
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| 8. |
- Wieloch, Thomas, 1979-
(författare)
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Intramolecular isotope analysis reveals plant ecophysiological signals covering multiple timescales
- 2019
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Doktorsavhandling (övrigt vetenskapligt/konstnärligt)abstract
- Our societies' wellbeing relies on stable and healthy environments. However, our current lifestyles, growth-oriented economic policies and the population explosion are leading to potentially catastrophic degradation of ecosystems and progressive disruption of food chains. Hopefully, more clarity about what the future holds in store will trigger stronger efforts to find, and adopt, problem-focused coping strategies and encourage environmentally friendly lifestyles.Forecasting environmental change/destruction is complicated (inter alia) by lack of complete understanding of plant-environment interactions, particularly those involved in slow processes such as plant acclimatisation and adaptation. This stems from deficiencies in tools to analyse such slow processes. The present work aims at developing tools that can provide retrospective ecophysiological information covering timescales from days to millennia.Natural archives, such as tree-rings, preserve plant metabolites over long timescales. Analyses of intramolecular isotope abundances in plant metabolites have the potential to provide retrospective information about metabolic processes and underlying environmental controls. Thus, my colleagues and I (hereafter we) analysed intramolecular isotope patterns in tree rings to develop analytical tools that can convey information about clearly-defined plant metabolic processes over multiple timescales. Such tools might help (inter alia) to constrain plants' capacities to sequester excess amounts of anthropogenic CO2; the so-called CO2 fertilisation effect. This, in turn, might shed light on plants' sink strength for the greenhouse gas CO2, and future plant performance and growth under climate change.In the first of three studies, reported in appended papers, we analysed intramolecular 13C/12C ratios in tree-ring glucose. In six angiosperm and six gymnosperm species we found pronounced intramolecular 13C/12C differences, exceeding 10‰. These differences are transmitted into major global C pools, such as soil organic matter. Taking intramolecular 13C/12C differences into account might improve isotopic characterisation of soil metabolic processes and soil CO2 effluxes. In addition, we analysed intramolecular 13C/12C ratios in a Pinus nigra tree-ring archive spanning the period 1961 to 1995. These data revealed new ecophysiological 13C/12C signals, which can facilitate climate reconstructions and assessments of plant-environment interactions at higher resolution; thus providing higher quality information. We proposed that 13C/12C signals at glucose C-1 to C-2 derive from carbon injection into the Calvin-Benson cycle via the oxidative pentose phosphate pathway. We concluded that intramolecular 13C/12C measurements provide valuable new information about long-term metabolic dynamics for application in biogeochemistry, plant physiology, plant breeding, and paleoclimatology.In the second study, we developed a comprehensive theory on the metabolic and ecophysiological origins of 13C/12C signals at tree-ring glucose C-5 and C-6. According to this theory and theoretical implications of the first study on signals at C-1 to C-3, analysis of such intramolecular signals can provide information about several metabolic processes. At C-3, a well-known signal reflecting CO2 uptake is preserved. The glucose-6-phosphate shunt around the Calvin-Benson cycle affects 13C/12C compositions at C-1 and C-2, while the 13C/12C signals at C-5 and C-6 reflect carbon fluxes into downstream metabolism. This theoretical framework enables further experimental studies to be conducted in a hypothesis-driven manner. In conclusion, the intramolecular approach provides information about carbon allocation in plant leaves. Thus, it gives access to long-term information on key ecophysiological processes, which could not be acquired by previous approaches.The abundance of the hydrogen isotope deuterium, δD, is important for linking the water cycle with plant ecophysiology. The main factors affecting δD in plant organic matter are commonly assumed to be the δD in source water and leaf-level evaporative enrichment. Current δD models incorporate biochemical D fractionations as constants. In the third study we showed that biochemical D fractionations respond strongly to low ambient CO2 levels and low light intensity. Thus, models of δD values in plant organic matter should incorporate biochemical fractionations as variables. In addition, we found pronounced leaf-level δD differences between α-cellulose and wax n-alkanes. We explained this by metabolite-specific contributions of distinct hydrogen sources during biosynthesis.Overall, this work advances our understanding of isotope distributions and isotope fractionations in plants. It reveals the immense potential of intramolecular isotope analyses for retrospective assessment of plant metabolism and associated environmental controls.
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