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- Carlsson, Fredrik, 1974-
(author)
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Wood Fungi and Forest Fire
- 2014
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Doctoral thesis (other academic/artistic)abstract
- Forest fires have been the major stand-replacing/modifying disturbance in boreal forests. To adapt to fire disturbance, different strategies have evolved. This thesis focuses on wood fungi, and the effect of forest fire on this organism group. In many ways it is a study on adaptation to forest fire, in concurrence with adaptation to dry open habitats. In Paper I we study increased heat resistance in mycelia from species prevalent in fire prone environments. Fungi were cultivated on fresh wood and exposed to different temperatures. Species prevalent in fire affected habitats had a much higher survival rate over all combinations of time and temperature compared to species associated with other environments. Based on this results the competitiveness was tested after temperature stress (paper II), three fire associated species, were tested against three non fire associated species. All fire associated species had a clear advantage after heat treatment, conquering a larger volume of wood than its competitor. In paper III we studied the effect of heat shock on decomposition rate, 18 species was tested. Species were cultivated and monitored for CO2 accumulation for 8 weeks and then heat shocked. All species including non fire associated species seemed to up-regulate decomposition after heat shock, this response was more pronounced in fire associated species. To look at the possible effect of forest fire on population structure (Paper IV), we developed 29 SNP/INDELs for Phlebiopsis. gigantea. We amplified the marker containing fragments in 132 individuals of P. gigantea in 6 populations, 3 which were found in areas affected by forest fire and 3 in unaffected areas. We found no genetic structure in accordance to forest fire. However we detected geographic structure, which stands in contrast to earlier studies. This might be due to the method, using SNP´s and number of individuals in the study. Finally we collected cross-sections of decayed logs to evaluate the number of fungal species domains that are likely to be hit when drilling a saw-dust sample in a log. We used these estimates to simulate how many species that will be found by a certain number of samples. We found that in 99% of the
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| 2. |
- Fritz, Örjan, et al.
(author)
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Bjurkärr – en småländsk bokskog med unika lavar och svampar.
- 2014
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In: Svensk Botanisk Tidskrift. - 0039-646X. ; 108:3–4, s. 2-18
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Journal article (peer-reviewed)abstract
- The old beech forest (250–300 yr) at Bjurkärr (core area 30 ha) in the province of Småland, S Sweden, was surveyed for epiphytic lichens of conservation concern in 1993–94. Several rare red-listed lichens were recorded, many with large populations. In 2011 the most endangered lichens were resurveyed due to the incorporation of Bjurkärr in the forthcoming national park of Lake Åsnen. Most species of the 1993–94 survey were rediscovered, whereas some apparently had vanished as a result of substrate decomposition. In addition, ten more red-listed lichens were recorded in 2011, e.g., Arthonia arthonioides and Collema fragrans. We also recorded Biatora ligni-mollis, not previously reported from Sweden. In all, 39 red-listed lichens are currently known from the area. Few areas in Sweden host such a large number of red-listed epiphytic lichens. In addition, the wood-inhabiting fungi on beech logs and snags were surveyed in 2011. The content of dead wood was high. A large number of red-listed or otherwise interesting wood-inhabiting fungi were recorded, e.g., Hericium erinaceus. Eleven fungal indicator species for valuable beech forests in Europe were recorded, the highest number for any Swedish beech forest. Factors explaining the high number of species of conservation concern include the long continuity of old, often slow-growing and damaged trees, the favourable geographical position in south Sweden, the suitable microclimate caused by the large neighboring lake and the exemption from modern forestry.
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| 4. |
- Graco-Roza, Caio, et al.
(author)
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Distance decay 2.0 – A global synthesis of taxonomic and functional turnover in ecological communities
- 2022
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In: Global Ecology and Biogeography. - : Wiley. - 1466-822X .- 1466-8238. ; 31:7, s. 1399-1421
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Journal article (peer-reviewed)abstract
- Aim: Understanding the variation in community composition and species abundances (i.e., beta-diversity) is at the heart of community ecology. A common approach to examine beta-diversity is to evaluate directional variation in community composition by measuring the decay in the similarity among pairs of communities along spatial or environmental distance. We provide the first global synthesis of taxonomic and functional distance decay along spatial and environmental distance by analysing 148 datasets comprising different types of organisms and environments.Location: Global.Time period: 1990 to present.Major taxa studied: From diatoms to mammals.Method: We measured the strength of the decay using ranked Mantel tests (Mantel r) and the rate of distance decay as the slope of an exponential fit using generalized linear models. We used null models to test whether functional similarity decays faster or slower than expected given the taxonomic decay along the spatial and environmental distance. We also unveiled the factors driving the rate of decay across the datasets, including latitude, spatial extent, realm and organismal features.Results: Taxonomic distance decay was stronger than functional distance decay along both spatial and environmental distance. Functional distance decay was random given the taxonomic distance decay. The rate of taxonomic and functional spatial distance decay was fastest in the datasets from mid-latitudes. Overall, datasets covering larger spatial extents showed a lower rate of decay along spatial distance but a higher rate of decay along environmental distance. Marine ecosystems had the slowest rate of decay along environmental distances.Main conclusions: In general, taxonomic distance decay is a useful tool for biogeographical research because it reflects dispersal-related factors in addition to species responses to climatic and environmental variables. Moreover, functional distance decay might be a cost-effective option for investigating community changes in heterogeneous environments.
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| 5. |
- Heilmann-Clausen, Jacob
(author)
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Diversity of saproxylic fungi on decaying beech wood in protected forests in the county of Halland = Vedlevande svampar på bok i skyddade skogar i Hallands län
- 2005
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Reports (other academic/artistic)abstract
- Totalt 200 döda bokar fördelade över sju gamla bokskogsbestånd i Halland undersöktes under svampsäsongen 2004 på förekomsten av fruktkroppar av svampar. Ett standardprotokoll som tidigare tillämpats i bl.a. Danmark, Nederländerna och Belgien följdes för ifyllande av uppgifterna. Protokollet möjliggör en jämförelse av storsvampsamhällen på död bokved inom Europa.Totalt 284 arter av svamp påträffades i undersökningen, varav 20 var rödlistade. Den funna artstocken i Halland var mycket lik den som rapporterats från centrala Jylland i Danmark. Båda områdena karaktäriseras av näringsfattiga jordar och ett tämligen fuktigt och kyligt klimat, vilka förefaller påverka svampflorans artsammansättning. Sett utifrån ett svenskt naturskyddsperspektiv är bokskogarna i Halland mycket viktiga för skyddet av vedlevande svampar, men endast måttligt viktiga sett från en europeisk horisont.Rapporten är på engelska men har en sammanfattning på svenska.
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| 6. |
- Mikryukov, Vladimir, et al.
(author)
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Connecting the multiple dimensions of global soil fungal diversity
- 2023
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In: Science advances. - 2375-2548. ; 9:48
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Journal article (peer-reviewed)abstract
- How the multiple facets of soil fungal diversity vary worldwide remains virtually unknown, hindering the management of this essential species-rich group. By sequencing high-resolution DNA markers in over 4000 topsoil samples from natural and human-altered ecosystems across all continents, we illustrate the distributions and drivers of different levels of taxonomic and phylogenetic diversity of fungi and their ecological groups. We show the impact of precipitation and temperature interactions on local fungal species richness (alpha diversity) across different climates. Our findings reveal how temperature drives fungal compositional turnover (beta diversity) and phylogenetic diversity, linking them with regional species richness (gamma diversity). We integrate fungi into the principles of global biodiversity distribution and present detailed maps for biodiversity conservation and modeling of global ecological processes.
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| 7. |
- Tedersoo, Leho, et al.
(author)
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Global patterns in endemicity and vulnerability of soil fungi.
- 2022
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In: Global change biology. - : Wiley. - 1365-2486 .- 1354-1013. ; 28:22, s. 6696-6710
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Journal article (peer-reviewed)abstract
- Fungi are highly diverse organisms, which provide multiple ecosystem services. However, compared with charismatic animals and plants, the distribution patterns and conservation needs of fungi have been little explored. Here, we examined endemicity patterns, global change vulnerability and conservation priority areas for functional groups of soil fungi based on six global surveys using a high-resolution, long-read metabarcoding approach. We found that the endemicity of all fungi and most functional groups peaks in tropical habitats, including Amazonia, Yucatan, West-Central Africa, Sri Lanka, and New Caledonia, with a negligible island effect compared with plants and animals. We also found that fungi are predominantly vulnerable to drought, heat and land-cover change, particularly in dry tropical regions with high human population density. Fungal conservation areas of highest priority include herbaceous wetlands, tropical forests, and woodlands. We stress that more attention should be focused on the conservation of fungi, especially root symbiotic arbuscular mycorrhizal and ectomycorrhizal fungi in tropical regions as well as unicellular early-diverging groups and macrofungi in general. Given the low overlap between the endemicity of fungi and macroorganisms, but high conservation needs in both groups, detailed analyses on distribution and conservation requirements are warranted for other microorganisms and soil organisms.
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| 8. |
- Zamora, Juan Carlos, et al.
(author)
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Considerations and consequences of allowing DNA sequence data as types of fungal taxa
- 2018
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In: IMA Fungus. - : INT MYCOLOGICAL ASSOC. - 2210-6340 .- 2210-6359. ; 9:1, s. 167-185
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Journal article (peer-reviewed)abstract
- Nomenclatural type definitions are one of the most important concepts in biological nomenclature. Being physical objects that can be re-studied by other researchers, types permanently link taxonomy (an artificial agreement to classify biological diversity) with nomenclature (an artificial agreement to name biological diversity). Two proposals to amend the International Code of Nomenclature for algae, fungi, and plants (ICN), allowing DNA sequences alone (of any region and extent) to serve as types of taxon names for voucherless fungi (mainly putative taxa from environmental DNA sequences), have been submitted to be voted on at the 11th International Mycological Congress (Puerto Rico, July 2018). We consider various genetic processes affecting the distribution of alleles among taxa and find that alleles may not consistently and uniquely represent the species within which they are contained. Should the proposals be accepted, the meaning of nomenclatural types would change in a fundamental way from physical objects as sources of data to the data themselves. Such changes are conducive to irreproducible science, the potential typification on artefactual data, and massive creation of names with low information content, ultimately causing nomenclatural instability and unnecessary work for future researchers that would stall future explorations of fungal diversity. We conclude that the acceptance of DNA sequences alone as types of names of taxa, under the terms used in the current proposals, is unnecessary and would not solve the problem of naming putative taxa known only from DNA sequences in a scientifically defensible way. As an alternative, we highlight the use of formulas for naming putative taxa (candidate taxa) that do not require any modification of the ICN.
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