| 1. |
- Abe, K., et al.
(författare)
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Neutron tagging following atmospheric neutrino events in a water Cherenkov detector
- 2022
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Ingår i: Journal of Instrumentation. - : Institute of Physics (IOP). - 1748-0221. ; 17:10
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Tidskriftsartikel (refereegranskat)abstract
- We present the development of neutron-tagging techniques in Super-Kamiokande IV using a neural network analysis. The detection efficiency of neutron capture on hydrogen is estimated to be 26%, with a mis-tag rate of 0.016 per neutrino event. The uncertainty of the tagging efficiency is estimated to be 9.0%. Measurement of the tagging efficiency with data from an Americium-Beryllium calibration agrees with this value within 10%. The tagging procedure was performed on 3,244.4 days of SK-IV atmospheric neutrino data, identifying 18,091 neutrons in 26,473 neutrino events. The fitted neutron capture lifetime was measured as 218 +/- 9 mu s.
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| 2. |
- Kanemaru, K, et al.
(författare)
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Plasma membrane phosphatidylinositol (4,5)-bisphosphate is critical for determination of epithelial characteristics
- 2022
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Ingår i: Nature communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 13:1, s. 2347-
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Tidskriftsartikel (refereegranskat)abstract
- Epithelial cells provide cell-cell adhesion that is essential to maintain the integrity of multicellular organisms. Epithelial cell-characterizing proteins, such as epithelial junctional proteins and transcription factors are well defined. However, the role of lipids in epithelial characterization remains poorly understood. Here we show that the phospholipid phosphatidylinositol (4,5)-bisphosphate [PI(4,5)P2] is enriched in the plasma membrane (PM) of epithelial cells. Epithelial cells lose their characteristics upon depletion of PM PI(4,5)P2, and synthesis of PI(4,5)P2 in the PM results in the development of epithelial-like morphology in osteosarcoma cells. PM localization of PARD3 is impaired by depletion of PM PI(4,5)P2 in epithelial cells, whereas expression of the PM-targeting exocyst-docking region of PARD3 induces osteosarcoma cells to show epithelial-like morphological changes, suggesting that PI(4,5)P2 regulates epithelial characteristics by recruiting PARD3 to the PM. These results indicate that a high level of PM PI(4,5)P2 plays a crucial role in the maintenance of epithelial characteristics.
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| 3. |
- Bourgard, Catarina, 1985, et al.
(författare)
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Plasmodium vivax Biology: Insights Provided by Genomics, Transcriptomics and Proteomics.
- 2018
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Ingår i: Frontiers in Cellular and Infection Microbiology. - : Frontiers Media SA. - 2235-2988. ; 8
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Forskningsöversikt (refereegranskat)abstract
- During the last decade, the vast omics field has revolutionized biological research, especially the genomics, transcriptomics and proteomics branches, as technological tools become available to the field researcher and allow difficult question-driven studies to be addressed. Parasitology has greatly benefited from next generation sequencing (NGS) projects, which have resulted in a broadened comprehension of basic parasite molecular biology, ecology and epidemiology. Malariology is one example where application of this technology has greatly contributed to a better understanding ofPlasmodiumspp. biology and host-parasite interactions. Among the several parasite species that cause human malaria, the neglected Plasmodium vivax presents great research challenges, asin vitroculturing is not yet feasible and functional assays are heavily limited. Therefore, there are gaps in our P. vivax biology knowledge that affect decisions for control policies aiming to eradicate vivax malaria in the near future. In this review, we provide a snapshot of key discoveries already achieved in P. vivax sequencing projects, focusing on developments, hurdles, and limitations currently faced by the research community, as well as perspectives on future vivax malaria research.
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| 4. |
- Céron, Wilmar L., et al.
(författare)
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Multiscale Interactions of Climate Variability and Rainfall in the Sogamoso River Basin : Implications for the 1998–2000 and 2010–2012 Multiyear La Niña Events
- 2022
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Ingår i: Water. - : MDPI AG. - 2073-4441. ; 14:22
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Tidskriftsartikel (refereegranskat)abstract
- In this research, we explored rainfall variability in the Sogamoso River Basin (SRB), its relationship with multiple scales of variability associated with El Niño–Southern Oscillation (ENSO), and the implications for rainfall prolongation during multiyear La Niña events. First, we examined time-frequency rainfall variations in the SRB based on the standardized precipitation index (SPI) from 1982 to 2019, using wavelet transform and principal component analysis (PCA). In addition, we applied wavelet analysis to investigate the links at different time scales between ENSO and the main mode of rainfall variability in the SRB. Finally, we explored the role that each scale of variability played in the prolongation and intensity of rainfall in the SRB during the 1998–2000 and 2010–2012 multiyear La Niña events. The results of the wavelet analyses revealed significant ENSO relationships affecting SRB rainfall at three different scales: quasi-biennial (2–3-years) between 1994 and 2002, as well as from 2008 to 2015; interannual (5–7 years) from 1995 to 2011; and quasi-decadal (9–12 years) from 1994 to 2012. This indicates that multiyear events are a consequence of the interaction of several scales of variability rather than a unique scale. During the 1998–2000 event, El Niño conditions were observed during the first half of 1998; subsequently, a cooling of the central and eastern tropical Pacific (western tropical Pacific) on the quasi-biennial (interannual) scale was observed during 1999; in 2000, only La Niña conditions were observed on the interannual scale. Therefore, during this event, the quasi-biennial (interannual) scale promoted wet conditions in the Caribbean, the Andes, and the Colombian Pacific from June–August (JJA) 1998 to JJA 1999 (during 1999–2000). During the 2010–2012 La Niña event, the interbasin sea surface temperature gradient between the tropical Pacific and tropical North Atlantic contributed to strengthening (weakening) of the Choco jet (Caribbean low-level jet) on the quasi-biennial scale during 2010, and the interannual scale prolonged its intensification (weakening) during 2011–2012, acting to extend the rainy periods over most of the Colombian territory. Variations on quasi-decadal scales were modulated by the Pacific decadal oscillation (PDO), resulting in a further intensification of the 2010–2012 La Niña event, which developed under conditions of the cold PDO (CPDO) phase, whereas the 1998–2000 La Niña occurred during the transition from warm (WPDO, 1977–1998) to cold (CPDO, 2001–2015) conditions. These results indicate that the interaction of quasi-biennial to quasi-decadal scales of variability could play a differential role in the configuration and prolongation of rainfall events in the SRB.
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