| 1. |
- Bro-Jørgensen, Maiken Hemme, et al.
(författare)
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Genomic insights on the extinct Baltic harp seal population
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Annan publikation (övrigt vetenskapligt/konstnärligt)abstract
- The harp seal is a cold adapted seal species, which requires a suitable formation of pack ice during winter and spring to secure successfully breeding. Today harp seals live in sub-Arctic regions and the North Atlantic, but during the middle Holocene Period, a breeding population existed in the Baltic Sea. In order to investigate the genetic affinity and faith of the now extinct Baltic harp seal population we analysed contemporary and ancient mitogenomes from across the species contemporary and ancient range. Ancient mitochondrial genomes were generated for a total of 49 Baltic harp seals ranging from Late Mesolithic to the Iron Age, together with five Neolithic samples from the White Sea and two Neolithic samples from the Northwest Atlantic Ocean. The ancient data was compared to published modern harp seal data assigned to the present breeding populations around Newfoundland, the Greenland Sea and the White Sea. Surprisingly only limited phylogenetic resolution was found among the ancient and modern localities. The statistical measures for genetic differentiation, however, identified significant levels of population genetic differentiation between the Baltic harp seal population and all modern populations, which suggest an independent breeding population in the Baltic Sea. The low level of genetic differentiation to the White Sea population indicate a shared ancestry between the Baltic and White Sea. The generated Skyline plot suggest second wave of colonization after a hiatus in the Baltic Sea. Interestingly, the genetic diversity in the Baltic harp seal population was significantly higher than in any of the modern populations. However, a drastic decrease in genetic diversity is observed from the Bronze Age to the Iron Age, which might be linked to effects of high hunting pressure and climatic changes towards the final extirpation of harp seals in the Baltic.
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| 2. |
- Glykou, Aikaterini, et al.
(författare)
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Reconstructing the ecological history of the extinct harp seal population of the Baltic Sea
- 2021
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Ingår i: Quaternary Science Reviews. - : Elsevier BV. - 0277-3791 .- 1873-457X. ; 251
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Tidskriftsartikel (refereegranskat)abstract
- The harp seal (Pagophilus groenlandicus), today a subarctic species with breeding populations in the White Sea, around the Jan Mayen Islands and Newfoundland, was a common pinniped species in the Baltic Sea during the mid- and late Holocene. It is puzzling how an ice dependent species could breed in the Baltic Sea during the Holocene Thermal Maximum (HTM), and it remains unclear for how long harp seals bred in the Baltic Sea and when the population became extirpated. We combined radiocarbon dating of harp seal bones with zooarchaeological, palaeoenvironmental and stable isotope data to reconstruct the harp seal occurrence in the Baltic Sea. Our study revealed two phases of harp seal presence and verifies that the first colonization and establishment of a local breeding population occurred within the HTM. We suggest that periods with very warm summers but cold winters allowed harp seals to breed on the ice. Human pressure, salinity fluctuations with consequent changes in prey availability and competition for food resources, mainly cod, resulted in physiological stress that ultimately led to a population decline and local extirpation during the first phase. The population reappeared after a long hiatus. Final extinction of the Baltic Sea harp seal coincided with the Medieval Warm Period. Our data provide insights for the first time on the combined effects of past climatic and environmental change and human pressure on seal populations and can contribute with new knowledge on ongoing discussions concerning the impacts of such effects on current arctic seal populations.
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| 3. |
- Niemi, Marianna, et al.
(författare)
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Temporal Fluctuation in North East Baltic Sea Region Cattle Population Revealed by Mitochondrial and Y-Chromosomal DNA Analyses
- 2015
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Ingår i: PLOS ONE. - : Public Library of Science (PLoS). - 1932-6203. ; 10:5
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Tidskriftsartikel (refereegranskat)abstract
- Background Ancient DNA analysis offers a way to detect changes in populations over time. To date, most studies of ancient cattle have focused on their domestication in prehistory, while only a limited number of studies have analysed later periods. Conversely, the genetic structure of modern cattle populations is well known given the undertaking of several molecular and population genetic studies. Results Bones and teeth from ancient cattle populations from the North-East Baltic Sea region dated to the Prehistoric (Late Bronze and Iron Age, 5 samples), Medieval (14), and Post-Medieval (26) periods were investigated by sequencing 667 base pairs (bp) from the mitochondrial DNA (mtDNA) and 155 bp of intron 19 in the Y-chromosomal UTY gene. Comparison of maternal (mtDNA haplotypes) genetic diversity in ancient cattle (45 samples) with modern cattle populations in Europe and Asia (2094 samples) revealed 30 ancient mtDNA haplotypes, 24 of which were shared with modern breeds, while 6 were unique to the ancient samples. Of seven Y-chromosomal sequences determined from ancient samples, six were Y2 and one Y1 haplotype. Combined data including Swedish samples from the same periods (64 samples) was compared with the occurrence of Y-chromosomal haplotypes in modern cattle (1614 samples). Conclusions The diversity of haplogroups was highest in the Prehistoric samples, where many haplotypes were unique. The Medieval and Post-Medieval samples also show a high diversity with new haplotypes. Some of these haplotypes have become frequent in modern breeds in the Nordic Countries and North-Western Russia while other haplotypes have remained in only a few local breeds or seem to have been lost. A temporal shift in Y-chromosomal haplotypes from Y2 to Y1 was detected that corresponds with the appearance of new mtDNA haplotypes in the Medieval and Post-Medieval period. This suggests a replacement of the Prehistoric mtDNA and Y- chromosomal haplotypes by new types of cattle.
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| 4. |
- Ukkonen, Pirkko, et al.
(författare)
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An Arctic seal in temperate waters : History of the ringed seal (Pusa hispida) in the Baltic Sea and its adaptation to the changing environment
- 2014
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Ingår i: The Holocene. - : SAGE Publications. - 0959-6836 .- 1477-0911. ; 24:12, s. 1694-1706
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Tidskriftsartikel (refereegranskat)abstract
- The ringed seal (Pusa hispida) is an early immigrant in the Baltic Basin and has since its arrival experienced substantial changes in the climate, salinity and productivity of the Basin. In this paper, we discuss the dispersal and distribution of the ringed seal during different stages of the Baltic Sea in relation to past and ongoing environmental changes. Subfossil ringed seal remains around the Baltic Sea and the Danish Straits were radiocarbon dated in order to map the distribution of the species in different time periods. The delta C-13 data were used in evaluating the changes in the marine character of the Baltic Basin. The sequence of the dates indicates a continuous presence of the species in the Baltic Basin. The earliest ringed seal finds come from the Skagerrak/Kattegat area (Denmark, Swedish west coast) and date to the full glacial period and Baltic Ice Lake. In the Baltic Basin, the species appears in the subfossil record during the Ancylus period, but the main part of the remains date to the Littorina stage. During the Littorina stage, the distribution of the species was at least periodically wider than today, covering also southern parts of the Baltic. The presence of breeding populations in southern parts of the Baltic during the Holocene Thermal Maximum (HTM) indicates that the winters were at least periodically cold enough for winter ice. The changes in the marine influence in the Baltic Basin can be seen in the seal collagen delta C-13 values, which serve as a proxy for qualitative changes in water mass salinity.
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| 5. |
- Wutke, Saskia, et al.
(författare)
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Spotted phenotypes in horses lost attractiveness in the Middle Ages
- 2016
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Ingår i: Scientific Reports. - : Springer Science and Business Media LLC. - 2045-2322. ; 6
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Tidskriftsartikel (refereegranskat)abstract
- Horses have been valued for their diversity of coat colour since prehistoric times; this is especially the case since their domestication in the Caspian steppe in ∼3,500 BC. Although we can assume that human preferences were not constant, we have only anecdotal information about how domestic horses were influenced by humans. Our results from genotype analyses show a significant increase in spotted coats in early domestic horses (Copper Age to Iron Age). In contrast, medieval horses carried significantly fewer alleles for these phenotypes, whereas solid phenotypes (i.e., chestnut) became dominant. This shift may have been supported because of (i) pleiotropic disadvantages, (ii) a reduced need to separate domestic horses from their wild counterparts, (iii) a lower religious prestige, or (iv) novel developments in weaponry. These scenarios may have acted alone or in combination. However, the dominance of chestnut is a remarkable feature of the medieval horse population.
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| 6. |
- Wutke, Saskia, et al.
(författare)
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The origin of ambling horses
- 2016
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Ingår i: Current Biology. - : Elsevier BV. - 0960-9822 .- 1879-0445. ; 26:15, s. 697-699
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Tidskriftsartikel (refereegranskat)abstract
- Horseback riding is the most fundamental use of domestic horses and has had a huge influence on the development of human societies for millennia. Over time, riding techniques and the style of riding improved. Therefore, horses with the ability to perform comfortable gaits (e.g. ambling or pacing), so-called ‘gaited’ horses, have been highly valued by humans, especially for long distance travel. Recently, the causative mutation for gaitedness in horses has been linked to a substitution causing a premature stop codon in the DMRT3 gene (DMRT3_Ser301STOP) [1]. In mice, Dmrt3 is expressed in spinal cord interneurons and plays an important role in the development of limb movement coordination [1]. Genotyping the position in 4396 modern horses from 141 breeds revealed that nowadays the mutated allele is distributed worldwide with an especially high frequency in gaited horses and breeds used for harness racing [2]. Here, we examine historic horse remains for the DMRT3 SNP, tracking the origin of gaitedness to Medieval England between 850 and 900 AD. The presence of the corresponding allele in Icelandic horses (9th–11th century) strongly suggests that ambling horses were brought from the British Isles to Iceland by Norse people. Considering the high frequency of the ambling allele in early Icelandic horses, we believe that Norse settlers selected for this comfortable mode of horse riding soon after arrival. The absence of the allele in samples from continental Europe (including Scandinavia) at this time implies that ambling horses may have spread from Iceland and maybe also the British Isles across the continent at a later date.
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