| 1. |
|
|
| 2. |
- Ferreira, MA, et al.
(författare)
-
Genome-wide association and transcriptome studies identify target genes and risk loci for breast cancer
- 2019
-
Ingår i: Nature communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 10:1, s. 1741-
-
Tidskriftsartikel (refereegranskat)abstract
- Genome-wide association studies (GWAS) have identified more than 170 breast cancer susceptibility loci. Here we hypothesize that some risk-associated variants might act in non-breast tissues, specifically adipose tissue and immune cells from blood and spleen. Using expression quantitative trait loci (eQTL) reported in these tissues, we identify 26 previously unreported, likely target genes of overall breast cancer risk variants, and 17 for estrogen receptor (ER)-negative breast cancer, several with a known immune function. We determine the directional effect of gene expression on disease risk measured based on single and multiple eQTL. In addition, using a gene-based test of association that considers eQTL from multiple tissues, we identify seven (and four) regions with variants associated with overall (and ER-negative) breast cancer risk, which were not reported in previous GWAS. Further investigation of the function of the implicated genes in breast and immune cells may provide insights into the etiology of breast cancer.
|
|
| 3. |
- Wright, G. S., et al.
(författare)
-
The Mid-Infrared Instrument for the James Webb Space Telescope, II: Design and Build
- 2015
-
Ingår i: Publications of the Astronomical Society of the Pacific. - : IOP Publishing. - 0004-6280 .- 1538-3873. ; 127:953, s. 595-611
-
Tidskriftsartikel (refereegranskat)abstract
- The Mid-InfraRed Instrument (MIRI) on the James Webb Space Telescope (JWST) provides measurements over the wavelength range 5 to 28: 5 mu m. MIRI has, within a single "package," four key scientific functions: photometric imaging, coronagraphy, single-source low-spectral resolving power (R similar to 100) spectroscopy, and medium-resolving power (R similar to 1500 to 3500) integral field spectroscopy. An associated cooler system maintains MIRI at its operating temperature of
|
|
| 4. |
- Buehler, S.A., et al.
(författare)
-
A New Halocarbon Absorption Model Based on HITRAN Cross-Section Data and New Estimates of Halocarbon Instantaneous Clear-Sky Radiative Forcing
- 2022
-
Ingår i: Journal of Advances in Modeling Earth Systems. - 1942-2466. ; 14:11
-
Tidskriftsartikel (refereegranskat)abstract
- The article describes a new practical model for the infrared absorption of chlorofluorocarbons and other gases with dense spectra, based on high-resolution transmission molecular absorption database (HITRAN) absorption cross-sections. The model is very simple, consisting of frequency-dependent polynomial coefficients describing the pressure and temperature dependence of absorption. Currently it is implemented for the halocarbon species required by the Radiative Forcing Model Intercomparison Project. In cases where cross-section data is available at a range of different temperatures and pressures, this approach offers practical advantages compared to previously available options, and is traceable, since the polynomial coefficients follow directly from the laboratory spectra. The new model is freely available and has several important applications, notably in remote sensing and in developing advanced radiation schemes for global circulation models that include halocarbon absorption. For demonstration, the model is applied to the problem of computing instantaneous clear-sky halocarbon radiative efficiencies and present day radiative forcing. Results are in reasonable agreement with earlier assessments that were carried out with the less explicit Pinnock method, and thus broadly validate that method. Plain Language Summary Chlorofluorocarbons and other related gases have dense and complicated absorption spectra that can be measured in the laboratory. We bring such measurements to a form that can be used for simulations of the transfer of radiation through the atmosphere. Then we use the new model to calculate new estimates of the climate impact of these man-made gases. The results broadly validate earlier calculations that were done with a less explicit method.
|
|
| 5. |
|
|
| 6. |
- Acharya, Kamal Prasad, et al.
(författare)
-
Latitudinal variation of life-history traits of an exotic and a native impatiens species in Europe
- 2017
-
Ingår i: Acta Oecologica. - : Elsevier BV. - 1146-609X .- 1873-6238. ; 81, s. 40-47
-
Tidskriftsartikel (refereegranskat)abstract
- Understanding the responses of invasive and native populations to environmental change is crucial for reliable predictions of invasions in the face of global change. While comparisons of responses across invasive species with different life histories have been performed before, comparing functional traits of congeneric native and invasive species may help to reveal driving factors associated with invasion. Here we compared morphological functional trait patterns of an invasive species (Impatiens parviflora) with its congeneric native species (I. noli-tangere) along an approximately 1600 km European latitudinal gradient from France (49 degrees 34'N) to Norway (63 degrees 40'N). Soil nitrogen was recorded during six weeks of the growing season, and light, soil moisture, and nutrient availability were estimated for each sampled population using community weighted means of indicator values for co-occurring species. Temperature data were gathered from nearby weather stations. Both the native and invasive species are taller at higher latitudes and this response is strongest in the invasive species. Seed mass and number of seeds per capsule increase in I. noli-tangere but decrease in I. parviflora towards higher latitudes. Surprisingly, plant height in the invasive I. parviflora decreases with increasing soil nitrogen availability. The latitudinal pattern in seed mass is positively related to temperature in I. noli-tangere and negatively in I. parviflora. Leaf area of both species decreases with increasing Ellenberg indicator values for nitrogen and light but increases with increasing soil moisture. Soil nitrogen concentrations and Ellenberg indicator values for nitrogen have significant positive (I. nolitangere) and negative (I. parviflora) effects on the number of seeds per capsule. Our results show that the native I. noli-tangere has efficient reproduction at its range edge while the invasive I. parviflora shows a marked decrease in seed size and seed number per capsule. These patterns are unrelated to the growth and obtained size of the plants: even low soil nitrogen availability in the north seemed not to limit plant growth and size. Our results suggest that the invasive I. parviflora tends to become more invasive at lower latitudes by producing heavier seeds and more seeds per capsule.
|
|
| 7. |
- Biasin, Elisa, et al.
(författare)
-
Femtosecond X-Ray Scattering Study of Ultrafast Photoinduced Structural Dynamics in Solvated[Co(terpy)2]2$
- 2016
-
Ingår i: Physical Review Letters. - : American Physical Society (APS). - 1079-7114 .- 0031-9007. ; 117:1
-
Tidskriftsartikel (refereegranskat)abstract
- We study the structural dynamics of photoexcited [Co(terpy)2]2+ in an aqueous solution with ultrafast x-ray diffuse scattering experiments conducted at the Linac Coherent Light Source. Through direct comparisons with density functional theory calculations, our analysis shows that the photoexcitation event leads to elongation of the Co-N bonds, followed by coherent Co-N bond length oscillations arising from the impulsive excitation of a vibrational mode dominated by the symmetrical stretch of all six Co-N bonds. This mode has a period of 0.33 ps and decays on a subpicosecond time scale. We find that the equilibrium bond-elongated structure of the high spin state is established on a single-picosecond time scale and that this state has a lifetime of ∼7 ps.
|
|
| 8. |
- Buehler, S.A., et al.
(författare)
-
ARTS, the Atmospheric Radiative Transfer Simulator - Version 2.2, the planetary toolbox edition
- 2018
-
Ingår i: Geoscientific Model Development. - : Copernicus GmbH. - 1991-959X .- 1991-9603. ; 11:4, s. 1537-1556
-
Tidskriftsartikel (refereegranskat)abstract
- This article describes the latest stable release (version 2.2) of the Atmospheric Radiative Transfer Simulator (ARTS), a public domain software for radiative transfer simulations in the thermal spectral range (microwave to infrared). The main feature of this release is a planetary toolbox that allows simulations for the planets Venus, Mars, and Jupiter, in addition to Earth. This required considerable model adaptations, most notably in the area of gaseous absorption calculations. Other new features are also described, notably radio link budgets (including the effect of Faraday rotation that changes the polarization state) and the treatment of Zeeman splitting for oxygen spectral lines. The latter is relevant, for example, for the various operational microwave satellite temperature sensors of the Advanced Microwave Sounding Unit (AMSU) family.
|
|
| 9. |
- Canton, Sophie, et al.
(författare)
-
Toward Highlighting the Ultrafast Electron Transfer Dynamics at the Optically Dark Sites of Photocatalysts
- 2013
-
Ingår i: The Journal of Physical Chemistry Letters. - : American Chemical Society (ACS). - 1948-7185. ; 4:11, s. 1972-1976
-
Tidskriftsartikel (refereegranskat)abstract
- Building a detailed understanding of the structure function relationship is a crucial step in the optimization of molecular photocatalysts employed in water splitting schemes. The optically dark nature of their active sites usually prevents a complete mapping of the photoinduced dynamics. In this work, transient X-ray absorption spectroscopy highlights the electronic and geometric changes that affect such a center in a bimetallic model complex. Upon selective excitation of the ruthenium chromophore, the cobalt moiety is reduced through intramolecular electron transfer and undergoes a spin flip accompanied by an average bond elongation of 0.20 +/- 0.03 angstrom. The analysis is supported by simulations based on density functional theory structures (B3LYP*/TZVP) and FEFF 9.0 multiple scattering calculations. More generally, these results exemplify the large potential of the technique for tracking elusive intermediates that impart unique functionalities in photochemical devices.
|
|
| 10. |
- Eriksson, Patrick, 1964, et al.
(författare)
-
A general database of hydrometeor single scattering properties at microwave and sub-millimetre wavelengths
- 2018
-
Ingår i: Earth System Science Data. - : Copernicus GmbH. - 1866-3516 .- 1866-3508. ; 10:3, s. 1301-1326
-
Tidskriftsartikel (refereegranskat)abstract
- A main limitation today in simulations and inversions of microwave observations of ice hydrometeors (cloud ice, snow, hail, etc.) is the lack of data describing the interaction between electromagnetic waves and the particles. To improve the situation, the development of a comprehensive dataset of such scattering properties has been started. The database aims at giving a broad coverage in both frequency (1 to 886 GHz) and temperature (190 to 270 K), to support both passive and active current and planned measurements, and to provide data corresponding to the full Stokes vector. This first version of the database is restricted to totally random particle orientation. Data for 34 particle sets, i.e. habits, have been generated. About 17 of the habits can be classified as single crystals, three habits can be seen as heavily rimed particles, and the remaining habits are aggregates of different types, e.g. snow and hail. The particle sizes considered vary between the habits, but maximum diameters of 10 and 20 mm are typical values for the largest single crystal and aggregate particles, respectively, and the number of sizes per habit is at least 30. Particles containing liquid water are also inside the scope of the database, but this phase of water is so far only represented by a liquid sphere habit. The database is built upon the netCDF4 file format. Interfaces to browse, extract and convert data for selected radiative transfer models are provided in MATLAB and Python. The database and associated tools are publicly available from Zenodo (https://doi.org/10.5281/zenodo.1175572, Ekelund et al., 2018b), and https://doi.org/10.5281/zenodo.1175588, Mendrok et al., 2018, respectively). Planned extensions include non-spherical raindrops, melting particles and a second orientation case that can be denoted as azimuthally random.
|
|
