| 1. |
- Beal, Jacob, et al.
(författare)
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Robust estimation of bacterial cell count from optical density
- 2020
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Ingår i: Communications Biology. - : Springer Science and Business Media LLC. - 2399-3642. ; 3:1
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Tidskriftsartikel (refereegranskat)abstract
- Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data.
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| 2. |
- Chan, Paul Shing-fong, et al.
(författare)
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Applying the Consolidated Framework for Implementation Research to investigate factors of implementing alcohol screening and brief intervention among primary care physicians and nurses in Hong Kong, China: an exploratory sequential mixed-method study
- 2024
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Ingår i: Implementation Science Communications. - : SPRINGERNATURE. - 2662-2211. ; 5:1
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Tidskriftsartikel (refereegranskat)abstract
- Background Alcohol screening and brief intervention (SBI) is an evidence-based intervention recommended by the World Health Organization. This study applied the Consolidated Framework for Implementation Research (CFIR) to understand facilitators and barriers of SBI implementation in primary care settings in Hong Kong, China.Methods This was a sequential mixed-method study. In-depth interviews of 21 physicians and 20 nurses working in the primary care settings from the public and private sectors were first conducted to identify CFIR constructs that were relevant to SBI implementation in the Chinese context and potential factors not covered by the CFIR. A questionnaire was then developed based on the qualitative findings to investigate factors associated with SBI implementation among 282 physicians and 295 nurses.Results The in-depth interviews identified 22 CFIR constructs that were facilitators or barriers of SBI implementation in Hong Kong. In addition, the stigmatization of alcohol dependence was a barrier and the belief that it was important for people to control the amount of alcohol intake in any situation was mentioned as a facilitator to implement SBI. In the survey, 22% of the participants implemented SBI in the past year. Factors associated with the SBI implementation echoed most of the qualitative findings. Among physicians and nurses in both sectors, they were more likely to implement SBI when perceiving stronger evidence supporting SBI, better knowledge and self-efficacy to implement SBI, more available resources, and clearer planning for SBI implementation in the clinics but less likely to do so when perceiving SBI implementation to be complicated and of higher cost, and drinking approved by the Chinese culture. Participants were more likely to implement SBI when perceiving SBI fit better with the existing practice and better leadership engagement in the public sector, but not in the private sector. Perceiving a stronger need and greater importance to implement SBI were associated with higher likelihood of SBI implementation among physicians, but not among nurses. Perceiving better organizational culture supporting SBI was positively associated with SBI implementation among nurses, but not among physicians.Conclusions There was a significant gap between SBI evidence and its implementation. Some strategies to improve SBI implementation may be different between physicians and nurses and between those in the public and private sectors. The CFIR is a useful framework for understanding facilitators and barriers of SBI implementation in primary care settings.
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| 3. |
- Zha, Shuai, et al.
(författare)
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Hydrodynamic simulations of electron-capture supernovae : progenitor and dimension dependence
- 2022
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Ingår i: Monthly notices of the Royal Astronomical Society. - : Oxford University Press (OUP). - 0035-8711 .- 1365-2966. ; 513:1, s. 1317-1328
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Tidskriftsartikel (refereegranskat)abstract
- We present neutrino-transport hydrodynamic simulations of electron-capture supernovae (ECSNe) in FLASH with new two-dimensional (2D) collapsing progenitor models. These progenitor models feature the 2D modelling of oxygen-flame propagation until the onset of core collapse. We perform axisymmetric simulations with six progenitor models that, at the time of collapse, span a range of propagating flame front radii. For comparison, we also perform a simulation with the same set-up using the canonical, spherically symmetrical progenitor model n8.8. We found that the variations in the progenitor models inherited from simulations of stellar evolution and flame propagation do not significantly alter the global properties of the neutrino-driven ECSN explosion, such as the explosion energy (∼1.36–1.48 × 1050 erg) and the mass (∼0.017–0.018 M⊙) and composition of the ejecta. Due to aspherical perturbations induced by the 2D flame, the ejecta contains a small amount (≲1.8 × 10−3 M⊙) of low-Ye (0.35 < Ye < 0.4) component. The baryonic mass of the protoneutron star is ∼1.34 M⊙ (∼1.357 M⊙) with the new (n8.8) progenitor models when simulations end at ∼400 ms and the discrepancy is due to updated weak-interaction rates in the progenitor evolutionary simulations. Our results reflect the nature of ECSN progenitors containing a strongly degenerate oxygen–neon–magnesium (ONeMg) core and suggest a standardized ECSN explosion initialized by ONeMg core collapse. Moreover, we carry out a rudimentary three-dimensional simulation and find that the explosion properties are fairly compatible with the 2D counterpart. Our paper facilitates a more thorough understanding of ECSN explosions following the ONeMg core collapse, though more three-dimensional simulations are still needed.
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