| 1. |
- Abdilzadeh, Raziyeh, et al.
(författare)
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A Molecular Assessment of the Taxonomy of Iranian Sylvia Warblers (Aves; Sylviidae).
- 2019
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Ingår i: Journal of Genetic Resources. - 2423-4257 .- 2588-2589. ; 5:2, s. 149-162
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Tidskriftsartikel (refereegranskat)abstract
- The largest genus in Sylviidae family is Sylvia, which is the archetype for warblers. It contains up to 28 species that are distributed in the Old World. Here, we study Iranian Sylvia using cytochrome c oxidase subunit 1 (cox1) and cytochrome b (cytb) mitochondrial markers to identify them and place in a phylogenetic context using all available GenBank samples of sufficient length. Bayesian trees for both cytb and cox1 mitochondrial markers are compatible. Previous results suggesting that the Sylvia curruca complex is separated into two major clades with high support is corroborated, as our results show two main clades, one that includes Sylvia atricapilla and Sylvia borin plus Pseudoalcippe atriceps and Lioptilus nigricapillus, and the remainder of the Sylvia species in the other one. Our study did not support the geographical groups: The West- Mediterranean group, the Central-Mediterranean group, and the East- Mediterranean or the African-European species, the African-Asian species, and the Mediterranean species inferred on molecular evidenced by previous studies. Sylvia cantillans is divided into three clades, corroborating previous studies. We confirmed the following taxa to occur in Iran: Sylvia borin, Sylvia atricapilla, Sylvia curruca curruca, Sylvia curruca halimodendri, Sylvia althaea, Sylvia crassirostris, Sylvia mystacea and Sylvia nisoria. All Iranian samples were conclusively identified to species level, and none of them give rise to any further taxonomic inquiry.
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| 2. |
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| 3. |
- Abdilzadeh, R., et al.
(författare)
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Molecular assessment of the distribution and taxonomy of the Lesser Whitethroat Sylvia curruca complex in Iran, with particular emphasis on the identity of the contentious taxon, zagrossiensis Sarudny, 1911
- 2020
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Ingår i: Journal of Ornithology. - : Springer Science and Business Media LLC. - 2193-7192 .- 2193-7206. ; 161, s. 665-676
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Tidskriftsartikel (refereegranskat)abstract
- The Lesser Whitethroat Sylvia curruca complex continues to provide challenges for ornithologists and taxonomists. One of the remaining outstanding questions concerns the taxonomic identity of the different breeding populations in Iran and in particular zagrossiensis, which inhabits the Zagros mountains. We here used the three mitochondrial genes cyt b, COI and ND2, to evaluate samples of the Lesser Whitethroat complex from Iran. Our data include predominantly samples from the breeding season, and we find evidence of three taxa from Iran, of which two are certainly breeding; althaea from Kopet Dagh in NE Iran and the Kerman mountains, east of the Zagros mountains, SE Iran; and curruca from central Zagros mountains and northwestern Iran. Three samples of halimodendri from the south of Iran were migrating or wintering birds. The taxonomically contentious population from the Zagros mountains is here identified as belonging to the curruca clade, and evidence to recognize zagrossiensis based on molecular data is deemed insufficient.
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| 4. |
- Alström, Per, et al.
(författare)
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A review of the recent advances in the systematics of the avian superfamily Sylvioidea
- 2013
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Ingår i: Chinese Birds. - : Chinese Birds (Press). - 1674-7674. ; 4, s. 99-131
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Tidskriftsartikel (refereegranskat)abstract
- The systematics of the avian superfamily Sylvioidea are reviewed, focusing on studies of relationships among families and within genera, more superficially on taxonomic studies at the species level. For the families Bernieridae and Phylloscopidae, new analyses based on already published sequence data are presented. Our understanding of relationships has been vastly improved in recent years due to a large number of molecular studies. However, the relationships among the different families remain largely obscured, probably mainly as a result of rapid divergence of the different primary lineages (families). Also, species level taxonomy has been much improved in recent years due to a large number of studies applying molecular markers and/or vocalizations and other life-history data. It seems likely that the number of species will continue to increase, as new groups are being studied with modern integrative methods.
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| 5. |
- Alström, Per, et al.
(författare)
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Complete species-level phylogeny of the leaf warbler (Aves: Phylloscopidae) radiation
- 2018
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Ingår i: Molecular Phylogenetics and Evolution. - : Elsevier BV. - 1055-7903 .- 1095-9513. ; 126, s. 141-152
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Tidskriftsartikel (refereegranskat)abstract
- The leaf warbler radiation (Aves: Phylloscopidae) has undergone a c. 50% increase in the number of recognised species over the last three decades, mainly as a result of analyses of vocalisations and DNA. Using a multilocus dataset for all of the species in this family, and multispecies coalescent-based as well as concatenation methods, we provide the first complete species-level phylogeny for this important group, as well as an estimate of the timing of diversification. The most recent common ancestor for the family was dated at 11.7 million years ago (mya) (95% highest posterior density 9.8-13.7 mya), and divergence times between sister species ranged from 0.5 mya (0.3-0.8 mya) to 6.1 mya (4.8-7.5 mya). Based on our results, we support synonymising Seicercus with Phylloscopus, which results in a monogeneric Phylloscopidae. We discuss the pros and cons of this treatment, and we argue against proliferation of taxonomic names, and conclude that a large monogeneric Phylloscopidae leads to the fewest taxonomic changes compared to traditional classifications. We briefly discuss morphological evolution in the light of the phylogeny. The time calibrated phylogeny is a major improvement compared to previous studies based on a smaller number of species and loci and can provide a basis for future studies of other aspects of phylloscopid evolution.
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| 6. |
- Alström, Per, et al.
(författare)
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Comprehensive molecular phylogeny of the grassbirds and allies (Locustellidae) reveals extensive non-monophyly of traditional genera, and a proposal for a new classification
- 2018
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Ingår i: Molecular Phylogenetics and Evolution. - : Elsevier BV. - 1055-7903 .- 1095-9513. ; 127, s. 367-375
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Tidskriftsartikel (refereegranskat)abstract
- The widespread Old World avian family Locustellidae ('grassbirds and allies') comprises 62 extant species in 11 genera. In the present study, we used one mitochondrial and, for most species, four nuclear loci to infer the phylogeny of this family. We analysed 59 species, including the five previously unsampled genera plus two genera that had not before been analysed in a densely sampled dataset. This study revealed extensive disagreement with current taxonomy; the genera Bradypterus, Locustella, Megalurus, Megalurulus and Schoenicola were all found to be non-monophyletic. Non-monophyly was particularly pronounced for Megalurus, which was widely scattered across the tree. Three of the five monotypic genera (Amphilais, Buettikoferella and Malia) were nested within other genera; one monotypic genus (Chaetornis) formed a Glade with one of the two species of Schoenicola; whereas the position of the fifth monotypic genus (Elaphrornis) was unresolved. Robsonius was confirmed as sister to the other genera. We propose a phylogenetically informed revision of genus-level taxonomy, including one new generic name. Finally, we highlight several non-monophyletic species complexes and deep intra-species divergences that point to conflict in taxonomy and suggest an underestimation of current species diversity in this group.
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| 7. |
- Alström, Per, et al.
(författare)
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Description of a new species of Phylloscopus from Vietnam and Laos.
- 2010
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Ingår i: Ibis. - 0019-1019 .- 1474-919X. ; 152:1, s. 145-168
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Tidskriftsartikel (refereegranskat)abstract
- A new species of Phylloscopus warbler, which we name Phylloscopus calciatilis Limestone Leaf Warbler, is described from central and northern Vietnam and central and northern Laos; it probably also breeds in southernmost China. In morphology, the new species is very similar to Sulphur-breasted Warbler Phylloscopus ricketti, but it is smaller with a proportionately larger bill and rounder wing. Its song and calls are diagnostic. Based on mitochondrial and nuclear DNA, the new species is most closely related to P. ricketti and Yellow-vented Warbler Phylloscopus cantator, and it is inferred to be sister to the latter. The mitochondrial divergences between these three species are at the low end of the variation found in other species of Phylloscopus and Seicercus warblers, but greater than in other taxa generally treated as subspecies. Possible introgressive hybridization between the new species and P. ricketti is discussed, but more data are needed to establish whether it does occur and, if it does, to what extent. The new species appears to have a restricted breeding range in limestone karst environments, where it is locally common and therefore not under any immediate threat. In view of the recognition of the new species, all previous records of P. ricketti sensu lato need to be re-evaluated.
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| 8. |
- Alström, Per, et al.
(författare)
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Discovery of a relict lineage and monotypic family of passerine birds.
- 2014
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Ingår i: Biology Letters. - : The Royal Society. - 1744-9561 .- 1744-957X. ; 10:3
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Tidskriftsartikel (refereegranskat)abstract
- Analysis of one of the most comprehensive datasets to date of the largest passerine bird clade, Passerida, identified 10 primary well-supported lineages corresponding to Sylvioidea, Muscicapoidea, Certhioidea, Passeroidea, the ‘bombycillids’ (here proposed to be recognized as Bombycilloidea), Paridae/Remizidae (proposed to be recognized as Paroidea), Stenostiridae, Hyliotidae, Regulidae (proposed to be recognized as Reguloidea) and spotted wren-babbler Spelaeornis formosus. The latter was found on a single branch in a strongly supported clade with Muscicapoidea, Certhioidea and Bombycilloidea, although the relationships among these were unresolved. We conclude that the spotted wren-babbler represents a relict basal lineage within Passerida with no close extant relatives, and we support the already used name Elachura formosa and propose the new family name Elachuridae for this single species.
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| 9. |
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| 10. |
- Alström, Per, et al.
(författare)
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Gross morphology betrays phylogeny: the Scrub Warbler Scotocerca inquieta is not a cisticolid
- 2011
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Ingår i: Ibis. - 0019-1019 .- 1474-919X. ; 153:1, s. 87-97
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Tidskriftsartikel (refereegranskat)abstract
- The Scrub Warbler, which inhabits arid areas from North Africa to western Asia, has long been thought to be closely related to cisticolid warblers. However, analyses based on two mitochondrial and four nuclear loci place this species sister to the mainly Asian Cettiidae (bush warblers, tesias, etc.). Superficial morphological similarity to cisticolid warblers has previously clouded the species true relationship. Detailed morphology, such as facial bristles and claw and footpad structure, also supports a closer relationship to Cettiidae and some other non-cisticolid warblers.
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