| 1. |
- Hartley, Philippa, et al.
(författare)
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SKA Science Data Challenge 2: analysis and results
- 2023
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Ingår i: Monthly Notices of the Royal Astronomical Society. - 0035-8711 .- 1365-2966. ; 523:2, s. 1967-1993
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Tidskriftsartikel (refereegranskat)abstract
- The Square Kilometre Array Observatory (SKAO) will explore the radio sky to new depths in order to conduct transformational science. SKAO data products made available to astronomers will be correspondingly large and complex, requiring the application of advanced analysis techniques to extract key science findings. To this end, SKAO is conducting a series of Science Data Challenges, each designed to familiarize the scientific community with SKAO data and to drive the development of new analysis techniques. We present the results from Science Data Challenge 2 (SDC2), which invited participants to find and characterize 233 245 neutral hydrogen (H i) sources in a simulated data product representing a 2000 h SKA-Mid spectral line observation from redshifts 0.25-0.5. Through the generous support of eight international supercomputing facilities, participants were able to undertake the Challenge using dedicated computational resources. Alongside the main challenge, 'reproducibility awards' were made in recognition of those pipelines which demonstrated Open Science best practice. The Challenge saw over 100 participants develop a range of new and existing techniques, with results that highlight the strengths of multidisciplinary and collaborative effort. The winning strategy - which combined predictions from two independent machine learning techniques to yield a 20 per cent improvement in overall performance - underscores one of the main Challenge outcomes: that of method complementarity. It is likely that the combination of methods in a so-called ensemble approach will be key to exploiting very large astronomical data sets.
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| 2. |
- Moayyeri, Alireza, et al.
(författare)
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Genetic determinants of heel bone properties : genome-wide association meta-analysis and replication in the GEFOS/GENOMOS consortium
- 2014
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Ingår i: Human Molecular Genetics. - : Oxford University Press (OUP). - 0964-6906 .- 1460-2083. ; 23:11, s. 3054-3068
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Tidskriftsartikel (refereegranskat)abstract
- Quantitative ultrasound of the heel captures heel bone properties that independently predict fracture risk and, with bone mineral density (BMD) assessed by X-ray (DXA), may be convenient alternatives for evaluating osteoporosis and fracture risk. We performed a meta-analysis of genome-wide association (GWA) studies to assess the genetic determinants of heel broadband ultrasound attenuation (BUA; n = 14 260), velocity of sound (VOS; n = 15 514) and BMD (n = 4566) in 13 discovery cohorts. Independent replication involved seven cohorts with GWA data (in silico n = 11 452) and new genotyping in 15 cohorts (de novo n = 24 902). In combined random effects, meta-analysis of the discovery and replication cohorts, nine single nucleotide polymorphisms (SNPs) had genome-wide significant (P < 5 x 10(-8)) associations with heel bone properties. Alongside SNPs within or near previously identified osteoporosis susceptibility genes including ESR1 (6q25.1: rs4869739, rs3020331, rs2982552), SPTBN1 (2p16.2: rs11898505), RSPO3 (6q22.33: rs7741021), WNT16 (7q31.31: rs2908007), DKK1 (10q21.1: rs7902708) and GPATCH1 (19q13.11: rs10416265), we identified a new locus on chromosome 11q14.2 (rs597319 close to TMEM135, a gene recently linked to osteoblastogenesis and longevity) significantly associated with both BUA and VOS (P < 8.23 x 10(-14)). In meta-analyses involving 25 cohorts with up to 14 985 fracture cases, six of 10 SNPs associated with heel bone properties at P < 5 x 10(-6) also had the expected direction of association with any fracture (P < 0.05), including three SNPs with P < 0.005: 6q22.33 (rs7741021), 7q31.31 (rs2908007) and 10q21.1 (rs7902708). In conclusion, this GWA study reveals the effect of several genes common to central DXA-derived BMD and heel ultrasound/DXA measures and points to a new genetic locus with potential implications for better understanding of osteoporosis pathophysiology.
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| 3. |
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| 4. |
- Kouchinsky, Artem, et al.
(författare)
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A Middle Cambrian fauna of skeletal fossils from the Kuonamka Formation, northern Siberia.
- 2011
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Ingår i: Alcheringa. - : Informa UK Limited. - 0311-5518 .- 1752-0754. ; 35:1, s. 123-189
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Tidskriftsartikel (refereegranskat)abstract
- An assemblage of mineralized skeletal fossils containing molluscs, hyoliths, chancelloriids, protoconodonts, lobopods, paleoscolecids, bradoriids, echinoderms and hexactinellid sponges is described from the middle Cambrian part of the Kuonamka Formation, exposed along the Malaya Kuonamka and Bol’shaya Kuonamka rivers, northern Siberian Platform. The sampled succession is attributed to the Kuonamkites and lower Tomagnostus fissus–Paradoxides sacheri biozones of the Amgan Stage of Siberia, correlated with Series 3, Stage 5—lower Drumian Stage of the IUGS chronostratigraphical scheme for the Cambrian. This work complements descriptions of molluscs from the same samples published by Gubanov et al. (2004) with additional material. It contains forms in common with coeval faunas from Australia, China, Western Gondwana, Avalonia, Laurentia and Baltica, increasing potential for global biostratigraphic correlation and understanding of palaeogeographic connections.
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| 5. |
- Larsson, Cecilia M
(författare)
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Early Cambrian Problematic Lophotrochozoans and Dilemmas of Scleritome Reconstructions
- 2012
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Doktorsavhandling (övrigt vetenskapligt/konstnärligt)abstract
- The emergence and radiation of metazoan body plans around the Precambrian/Cambrian boundary, some 500-600 million years ago, seems to be concordant with the appearance and diversification of preservable hard parts. Several Precambrian soft-bodied, multicellular organisms most likely represent stem-group bilaterians, but their fossil record is rather sparse. In contrast, the Cambrian fossil record is comparably rich – comprising hard part, trace fossil and delicate soft tissue preservation – and most animal phyla that we know of today had evolved by the end of the Cambrian. Consequently, this time represents an important period in the early evolution of metazoan life forms. Most skeletal remnants of invertebrate organisms from this period are preserved in incomplete, disarticulated sclerite assemblages, and the true architecture of the original skeletal structure, the scleritome, may therefore be hard to discern. Many scleritomous taxa have been suggested to be members of the lophotrochozoan clade, while their exact position within this group remains unclear. Such taxa are often referred to as Problematica. This thesis deals with some problematic scleritomous early Cambrian lophotrochozoans, and as such also addresses the dilemmas of scleritome reconstructions. In the first part, completely disarticulated calcareous sclerites from the lower Cambrian of North Greenland are described as Trachyplax arctica. Hypothetical scleritome reconstruction alternatives and comparisons to other scleritome-bearing taxa are discussed, but the lack of articulated material obscures any satisfactory conclusions regarding phylogenetic affinities and the original morphology of the organism. The other part of the thesis focuses on some minute, organophosphatic scleritomous metazoans, tommotiids, found in lower Cambrian limestone successions in South Australia – Paterimitra pyramidalis and Kulparina rostrata – their scleritome architecture and their phylogenetic relationship with paterinid brachiopods. The oldest brachiopod from South Australia, Askepasma saproconcha, and the slightly younger Askepasma toddense are also described and discussed. Based on articulated specimens, recently described partial scleritomes of the tommotiid Eccentrotheca helenia and similarities in shell ultrastructure with both Eccentrotheca and Askepasma, Paterimitra is interpreted as a stem-group brachiopod and reconstructed as a bilaterally symmetrical, sessile, filter feeder with a tubular/conical scleritome. The morphological similarities with Paterimitra point in the same direction for the slightly older Kulparina.
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| 6. |
- Oh, Yeongju, et al.
(författare)
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Periostracum in Cambrian helcionelloid and rostroconch molluscs : comparison to modern taxa
- 2024
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Ingår i: Lethaia. - : Scandinavian University Press. - 0024-1164 .- 1502-3931. ; 57:1, s. 1-17
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Tidskriftsartikel (refereegranskat)abstract
- The periostracum, a non-calcified organic layer that envelops the mineralized shell layer ('ostracum') of molluscs, acts as an initial framework for the calcified 'ostracum.' Despite its significance in biomineralization in molluscs, fossil examples of the periostracum are limited in the geological record, especially from the Palaeozoic era, due to its susceptibility to post-mortem decay. In this study, we describe radial threads found on the outer surface of Cambrian molluscs, including helcionelloids and rostroconchs, which we interpret as fossilized periostracal structures. These radial threads are observed in 13 species from five valid genera, exhibiting a widespread palaeogeographical distribution encompassing Gondwana (Australia), Siberia, western Laurentia (Utah), and eastern Laurentia (Greenland), and spanning Cambrian Stage 4-Drumian deposits. These radial threads always cover the outermost surface of shells, dividing it into regular intervals, and develop through incremental growth. They originate from the apical area of helcionelloids or the umbo of rostroconchs. Detailed examination has revealed that the radial threads initiate at the apical region, but may be absent from the protoconch (embryonic shell). The radial threads are most likely preserved by mineral encrustation on the periostracum. Similar, but not homologous, radial threads are found in other fossil and modern molluscan taxa, such as the adhesive radial lines of anomalodesmatan bivalves or the periostracal ridges of viviparid gastropods.
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| 7. |
- Skovsted, Christian B., et al.
(författare)
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Early Cambrian record of failed durophagy and shell repair in an epibenthic mollusc
- 2007
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Ingår i: Biology Letters. - : The Royal Society. - 1744-9561 .- 1744-957X. ; 3:3, s. 314-317
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Tidskriftsartikel (refereegranskat)abstract
- Predation is arguably one of the main driving forces of early metazoan evolution, yet the fossil record of predation during the Ediacaran–Early Cambrian transition is relatively poor. Here, we present direct evidence of failed durophagous (shell-breaking) predation and subsequent shell repair in the Early Cambrian (Botoman) epibenthic mollusc Marocella from the Mernmerna Formation and Oraparinna Shale in the Flinders Ranges, South Australia. This record pushes back the first appearance of durophagy on molluscs by approximately 40 Myr.
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| 8. |
- Stockfors, Martin, 1968-
(författare)
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Cambro-Ordovician microorganisms: acritarchs and endoliths
- 2005
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Doktorsavhandling (övrigt vetenskapligt/konstnärligt)abstract
- Organic-walled microfossils are abundant and taxonomically diverse in Cambrian-Ordovician strata; some are important for biostratigraphy and for the correlation of geological successions. New assemblages of Cambrian-Ordovician acritarchs from Kolguev Island, Arctic Russia and Middle Cambrian ichnofossils of endoliths from Peary Land, North Greenland are studied. Twenty-seven acritarch species are described in detail and 10 taxa are left under open nomenclature. The diagnosis of one genus is restricted, and two other are emended. New combinations are proposed for three species and one new species is recognised. The studied acritarch assemblages are taxonomically rich and age-diagnostic and used to recognise Upper Cambrian and Tremadoc strata on Kolguev Island. The sedimentologically continuous successions provide for the first time palaeontological evidence of Cambrian strata in the north-eastern sector of Europe. The exact level of the Cambrian-Ordovician boundary was distinguished together with stratigraphic intervals equivalent to the Peltura and Acerocare zones of the Upper Cambrian of Baltica. The newly established relative age of the lowermost sedimentary succession overlying the Timanian unconformity allows verification of the minimum age of the Timanian deformation and the time-span of the hiatus bound to this unconformity. Endoliths occur in the fossil record from the Early Archean and they played an important role in the formation of stromatolites and the process of bioerosion and biodegradation. Endoliths that have actively bored into brachiopod shells or carbonate grains (euendoliths), and some that inhabited the cavities inside brachiopod shells (cryptoendoliths) are described. Borings within the carbonate grains extended with a dentritic pattern, whereas those within the brachiopod shells were formed by a multifilamentous euendolith which produced characteristic longitudinally ridged galleries. The cryptoendolithic morphologies include indeterminate coccoid masses and at least two filamentous forms. However, considerable variation in the dimensions of the currently phosphatised diagenetic crusts of the cryptoendoliths hinders discrimination.
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| 9. |
- Atkins, Christian J., et al.
(författare)
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Yochelcionella (Mollusca, Helcionelloida) from the lower Cambrian of North America
- 2008
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Ingår i: Bulletin of Geosciences. - : Czech Geological Survey. - 1214-1119 .- 1802-8225. ; 83:1, s. 23-38
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Tidskriftsartikel (refereegranskat)abstract
- Five named species of the helcionelloid mollusc genus Yochelcionella Runnegar & Pojeta, 1974 are recognized from the lower Cambrian (Cambrian Series 2) of North America: Yochelcionella erecta (Walcott, 1891), Y. americana Runnegar & Pojeta, 1980, Y. chinensis Pei, 1985, Y. greenlandica Atkins & Peel, 2004 and Y. gracilis Atkins & Peel, 2004, linking lower Cambrian outcrops along the present north-eastern seaboard. Yochelcionella erecta, an Avalonian species, is described for the first time, other species are derived from Laurentia. A revised concept of the Chinese species, Y. chinensis, is based mainly on a large sample from the Forteau Formation of western Newfoundland and the species may have stratigraphic utility between Cambrian palaeocontinents.
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| 10. |
- BERG-MADSEN, Vivianne, et al.
(författare)
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A TERGOMYAN MOLLUSC FROM THE UPPER CAMBRIAN OF WALES
- 1994
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Ingår i: PALAEONTOLOGY. - 0031-0239. ; 37, s. 505-512
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Tidskriftsartikel (refereegranskat)abstract
- Bellerophon cambriensis from the Upper Cambrian of North Wales is redescribed as the type species of the new genus Telamocornu. Unlike most similarly coiled molluscs of this age, apertural sinuses are present which permit both a functional morphological i
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