| 1. |
- Bergström, Anders, et al.
(författare)
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Grey wolf genomic history reveals a dual ancestry of dogs
- 2022
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Ingår i: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 607:7918, s. 313-320
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Tidskriftsartikel (refereegranskat)abstract
- The grey wolf (Canis lupus) was the first species to give rise to a domestic population, and they remained widespread throughout the last Ice Age when many other large mammal species went extinct. Little is known, however, about the history and possible extinction of past wolf populations or when and where the wolf progenitors of the present-day dog lineage (Canis familiaris) lived. Here we analysed 72 ancient wolf genomes spanning the last 100,000 years from Europe, Siberia and North America. We found that wolf populations were highly connected throughout the Late Pleistocene, with levels of differentiation an order of magnitude lower than they are today. This population connectivity allowed us to detect natural selection across the time series, including rapid fixation of mutations in the gene IFT88 40,000–30,000 years ago. We show that dogs are overall more closely related to ancient wolves from eastern Eurasia than to those from western Eurasia, suggesting a domestication process in the east. However, we also found that dogs in the Near East and Africa derive up to half of their ancestry from a distinct population related to modern southwest Eurasian wolves, reflecting either an independent domestication process or admixture from local wolves. None of the analysed ancient wolf genomes is a direct match for either of these dog ancestries, meaning that the exact progenitor populations remain to be located.
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| 2. |
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| 3. |
- Pilot, Malgorzata, et al.
(författare)
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Genetic Variability of the Grey Wolf Canis lupus in the Caucasus in Comparison with Europe and the Middle East : Distinct or Intermediary Population?
- 2014
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Ingår i: PLOS ONE. - : Public Library of Science (PLoS). - 1932-6203. ; 9:4, s. e93828-
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Tidskriftsartikel (refereegranskat)abstract
- Despite continuous historical distribution of the grey wolf (Canis lupus) throughout Eurasia, the species displays considerable morphological differentiation that resulted in delimitation of a number of subspecies. However, these morphological discontinuities are not always consistent with patterns of genetic differentiation. Here we assess genetic distinctiveness of grey wolves from the Caucasus (a region at the border between Europe and West Asia) that have been classified as a distinct subspecies C. l. cubanensis. We analysed their genetic variability based on mtDNA control region, microsatellite loci and genome-wide SNP genotypes (obtained for a subset of the samples), and found similar or higher levels of genetic diversity at all these types of loci as compared with other Eurasian populations. Although we found no evidence for a recent genetic bottleneck, genome-wide linkage disequilibrium patterns suggest a long-term demographic decline in the Caucasian population - a trend consistent with other Eurasian populations. Caucasian wolves share mtDNA haplotypes with both Eastern European and West Asian wolves, suggesting past or ongoing gene flow. Microsatellite data also suggest gene flow between the Caucasus and Eastern Europe. We found evidence for moderate admixture between the Caucasian wolves and domestic dogs, at a level comparable with other Eurasian populations. Taken together, our results show that Caucasian wolves are not genetically isolated from other Eurasian populations, share with them the same demographic trends, and are affected by similar conservation problems.
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| 4. |
- Ukkonen, Pirkko, et al.
(författare)
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An Arctic seal in temperate waters : History of the ringed seal (Pusa hispida) in the Baltic Sea and its adaptation to the changing environment
- 2014
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Ingår i: The Holocene. - : SAGE Publications. - 0959-6836 .- 1477-0911. ; 24:12, s. 1694-1706
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Tidskriftsartikel (refereegranskat)abstract
- The ringed seal (Pusa hispida) is an early immigrant in the Baltic Basin and has since its arrival experienced substantial changes in the climate, salinity and productivity of the Basin. In this paper, we discuss the dispersal and distribution of the ringed seal during different stages of the Baltic Sea in relation to past and ongoing environmental changes. Subfossil ringed seal remains around the Baltic Sea and the Danish Straits were radiocarbon dated in order to map the distribution of the species in different time periods. The delta C-13 data were used in evaluating the changes in the marine character of the Baltic Basin. The sequence of the dates indicates a continuous presence of the species in the Baltic Basin. The earliest ringed seal finds come from the Skagerrak/Kattegat area (Denmark, Swedish west coast) and date to the full glacial period and Baltic Ice Lake. In the Baltic Basin, the species appears in the subfossil record during the Ancylus period, but the main part of the remains date to the Littorina stage. During the Littorina stage, the distribution of the species was at least periodically wider than today, covering also southern parts of the Baltic. The presence of breeding populations in southern parts of the Baltic during the Holocene Thermal Maximum (HTM) indicates that the winters were at least periodically cold enough for winter ice. The changes in the marine influence in the Baltic Basin can be seen in the seal collagen delta C-13 values, which serve as a proxy for qualitative changes in water mass salinity.
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