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- Jacobson, Frida, 1975, et al.
(författare)
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pH dependence of copper geometry, reduction potential, and nitrite affinity in nitrite reductase
- 2007
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Ingår i: Journal of Biological Chemistry. - 0021-9258 .- 1083-351X. ; 282:9, s. 6347-6355
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Tidskriftsartikel (refereegranskat)abstract
- Many properties of copper-containing nitrite reductase are pH-dependent, such as gene expression, enzyme activity, and substrate affinity. Here we use x-ray diffraction to investigate the structural basis for the pH dependence of activity and nitrite affinity by examining the type 2 copper site and its immediate surroundings in nitrite reductase from Rhodobacter sphaeroides 2.4.3. At active pH the geometry of the substrate-free oxidized type 2 copper site shows a near perfect tetrahedral geometry as defined by the positions of its ligands. At higher pH values the most favorable copper site geometry is altered toward a more distorted tetrahedral geometry whereby the solvent ligand adopts a position opposite to that of the His-131 ligand. This pH-dependent variation in type 2 copper site geometry is discussed in light of recent computational results. When co-crystallized with substrate, nitrite is seen to bind in a bidentate fashion with its two oxygen atoms ligating the type 2 copper, overlapping with the positions occupied by the solvent ligand in the high and low pH structures. Fourier transformation infrared spectroscopy is used to assign the pH dependence of the binding of nitrite to the active site, and EPR spectroscopy is used to characterize the pH dependence of the reduction potential of the type 2 copper site. Taken together, these spectroscopic and structural observations help to explain the pH dependence of nitrite reductase, highlighting the subtle relationship between copper site geometry, nitrite affinity, and enzyme activity.
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| 3. |
- Pistorius, Pierre A., et al.
(författare)
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A demographic comparison of two Nordic populations of Greylag Geese Anser anser
- 2007
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Ingår i: Ibis. - 0019-1019. ; 149:3, s. 553-563
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Tidskriftsartikel (refereegranskat)abstract
- Greylag Geese Anser anser have been neck-banded on an annual basis in Scania, southern Sweden since 1984 and in Norway since 1986 as part of a Nordic Greylag project. This has yielded a large database of resightings, which we used here to estimate and compare survival rates between the two populations by means of mark-recapture models. Estimated adult survival was sex-dependent in the Scanian population, probably a result of differential neck band retention rates in this population. Mean juvenile survival was about 12% higher in the Scanian population (0.603 vs. 0.485). Adult survival in the Norwegian population was 0.728 (males 0.733; females 0.725), and in males and females from the Scanian population was 0.711 (0.752 after accounting for higher neck band loss in males) and 0.771, respectively. Over the course of the study, juvenile survival in the Scanian population increased substantially, and adult survival was constant, whereas both these parameters declined in the Norwegian population. This study demonstrates that the two Nordic populations are demographically distinct and gives further support to the notion that they should be treated as separate management units. The decline of 10% in adult survival in the Norwegian population, the cause of which still remains uncertain, is likely to have had a major impact on the growth of this population.
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