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| 2. |
- Agnarsdóttir, Margrét, 1970-, et al.
(författare)
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Expression of CMV protein pp65 in cutaneous malignant melanoma
- 2019
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Ingår i: PLOS ONE. - : Public Library of Science (PLoS). - 1932-6203. ; 14:10
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Tidskriftsartikel (refereegranskat)abstract
- Human cytomegalovirus (CVM) has been detected by immunohistochemistry (IHC) in brain tumours; however, whether CMV antigen is seen in melanomas has not yet been elucidated. Applying IHC, melanoma tissue was assessed for the expression of pp65, a tegument protein of CMV. Two cohorts were available, cohort-I and II, the latter included also related metastasis. In addition to IHC, in situ hybridisation (ISH) was carried out to assess whether CMV related genetic sequences were detectable in a subset of cases. Seventy per cent of the 142 cases in cohort-I and 50% of the 37 cases in cohort-II displayed immunoreactivity (IR). In both cohorts, the IHC outcome correlated with T-stage (Cohort I: Spearman 0.22, p = 0.01, Cohort II: Fisher exact text 0.04). In 30 of cohort-II cases, when IHC staining was carried out on both the primary tumour and the corresponding metastasis, no change in IR was noted in 53%; in 20%, the IR was lower and in 27% higher in the metastasis when compared with the primary tumour. These results were significant (Fisher exact test 0.03). Applying ISH technique on four tumour cases with detectable pp65 protein, CMV related genetic sequence was not detected. Here, we demonstrate, congruent with observations published for brain tumours, that the protein pp65 is indeed observed in substantial number of melanoma cases with IHC; however, no signal was detected with ISH technique. These findings are in line with previously reported studies, demonstrating that the role of CMV in tumours is still debatable.
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| 5. |
- Bibikova, E. V., et al.
(författare)
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Sarmatia-Volgo-Uralia junction zone: Isotopic-geochronologic characteristic of supracrustal rocks and granitoids
- 2009
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Ingår i: Stratigraphy and Geological Correlation. - 0869-5938. ; 17:6, s. 561-573
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Tidskriftsartikel (refereegranskat)abstract
- The geochronologic (U-Pb isotopic system of zircons) and isotopic-geochemical (Sm-Nd isotopic system of the bulk rock) studies were performed along the profile extending from the eastern Sarmatia (in the west) to the Middle Volga megablock of Volgo-Uralia (in the east), i.e., across the entire junction zone for dating the integration of Sarmatia and Volgo-Uralia, representing two segments of the East European Craton. It is established that the examined rocks are characterized by the Paleoproterozoic Nd isotopic model age, which varies from 2.1 and 2.4 Ga, except for some samples indicating a similar age of the crust through the entire Sarmatia-Volgo-Uralia junction zone. The highly metamorphosed complexes of the granulite and amphibolite facies constituting the southwestern margin of Volgo-Uralia are Paleoproterozoic, not Archean, in age, contrary to previous views. Two Early Paleoproterozoic lithotectonic complexes are defined in Volgo-Uralia: South Volga metasedimentary and Tersa metasedimentary-volcanogenic. The obtained data confirm the asynchronous integration of individual segments into the East European Craton: the integration of Sarmatia and Volgo-Uralia approximately 2100-2000 Ma ago was followed by the conjunction of this newly-formed continent with Fennoscandia ca. 1800 Ma ago.
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| 6. |
- Bibikova, E. V., et al.
(författare)
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The early crust of the Volgo-Uralian segment of the East European Craton: Isotope-geochronological zirconology of metasedimentary rocks of the Bolshecheremshanskaya Formation and their Sm-Nd model ages
- 2015
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Ingår i: Stratigraphy and Geological Correlation. - 0869-5938. ; 23:1, s. 1-23
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Tidskriftsartikel (refereegranskat)abstract
- We present the results of isotope-geochronological study of metasedimentary rocks of the Bolshecheremshanskaya Formation of the Volgo-Uralian segment of the East European Craton carried out to identify their protoliths. 16 samples of high-alumina gneisses from well cores were studied using the Sm-Nd isotope method and T-Nd(DM) model ages. Accessory zircons were selected from rocks with the most ancient model ages (more 3.2 Ga) in three wells: Minnibaevskaya 20000, Novo-Elkhovskaya 20009, and Zai-Karatayskaya 12930 in South Tatarstan. The isotope U-Pb dating of 200 zircon grains was performed on a Cameca 1280 NORDSIM secondary ion mass spectrometer at the Natural History Museum (Stockholm, Sweden). The most applicable sites for analysis of zircon crystals were pre-selected based on cathodoluminescence images. The analytical results demonstrate the diversity of zircon groups in age from 3.8 to 2.6 Ga and together with geochemical features of metasedimentary rocks of the Bolshecheremshanskaya Formation suggest the heterogeneous composition and age of provenance areas under denudation. Occurrence of Eoarchean and Paleoarchean zircons in the clastic material of the protolith of the Bolshecheremshanskaya gneisses indicates the existence of Early Archean crustal terrains in Volgo-Uralia.
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| 7. |
- Bogdanova, Svetlana, et al.
(författare)
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Volgo-Uralia: The First U-Pb, Lu-Hf and Sm-Nd Isotopic Evidence of Preserved Paleoarchean Crust
- 2010
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Ingår i: American Journal of Science. - : American Journal of Science (AJS). - 0002-9599. ; 310:10, s. 1345-1383
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Tidskriftsartikel (refereegranskat)abstract
- The crustal segment Volgo-Uralia is the least known part of the East European Craton. Its crystalline crust is hidden beneath a thick Neoproterozoic to Phanerozoic cover but disclosed by thousands of drill holes. In conjunction with the recent "Tatseis" reflection seismic profile, we conducted the first isotopic study of the Bakaly granitoid block in eastern Volgo-Uralia, which represents a subsurface section of the layered upper-middle crust. The study included whole-rock Sm-Nd and ion-probe zircon U-Th-Pb (SIMS) and Lu-Hf (LA-ICPMS) analyses of granitoids from seven drill cores. The Bakaly block was also targeted because its rocks have never been subjected to granulite facies metamorphism, making it possible to date pristine, pre-metamorphic zircon. Our study showed that the four principal suites of granitoids in the Bakaly block are different in age, each corresponding to a particular stage of Archean crustal evolution between 3.3 and 2.6 Ga. The Tashliar monzonitic suite, belonging to an alkaline series yielded zircon ages of 3.3 and 3.2 Ga, which are the oldest ages yet found in Volgo-Urafia. The epsilon(Hf)(T) values of the dated zircon and the epsilon(Nd)(T) values of their host rocks indicate that a Paleo- to Eoarchean protolith with model T-DM ages up to 3.8 Ga had been involved in the formation of the Tashliar melts. Three Neoarchean rock suites, one comprising quartz dioritic and tonalitic gneisses (the Bak 1), another K-rich granodiorites, granites and migmatites (the Bak 2), and the third monzonitic granitoids (the Aktanysh suite) were formed sequentially between 2.72 and 2.60 Ga. The 2.72 Ga Bak 1 suite is chemically diverse. It includes granitoids of the TTG type related to slab/subduction melts as well as rocks formed by the re-melting of older crust with whole-rock Nd T-DM and Hf T-DM model ages of 3.4 to 3.2 Ga. The 2.69 to 2.65 Ga Bak 2 suite was probably associated with a major collisional event, which defined the stacked structure of the Archean crust in Volgo-Uralia and its seismic layering. Our data suggest that the Bak 2 melts originated partly from juvenile sources with epsilon(Hf)(T) zircon values up to +4.8, as well as mixed crustal and juvenile mantle materials. Some crustal contamination of the melts appears to have occurred as evidenced by incorporated xenocrystic zircon. The chemical compositions of Bak 2 granitoids from the different plutons, their zircon epsilon(Hf) values, and the Hf- and Nd T-DM ages all mirror a heterogeneous, collisional, crustal structure. During post-collisional extension at 2.6 Ga, the intrusion of Aktanysh monzonitic granitoids took place. These rocks also bear evidence of a long crustal pre-history with Nd and Hf T-DM model ages of 3.3 to 3.5 Ga. The Aktanysh rocks are coeval with the Tuymazy gabbro-norite-anorthosite intrusions, which are widely distributed along post-collisional shear zones in the Bakaly block. They could have provided the heat necessary to melt the crust at this stage. Altogether, the isotopic evidence suggests several episodes of crustal growth and recycling possibly reaching back to 3.6 and 3.8 Ga. Metamorphic zircon rims show that the Archean crust in the Bakaly block were subjected to several tectonothermal overprints in the Paleoproterozoic between 2.4 and 1.9 Ga ago.
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| 9. |
- Elobeid, Adila, et al.
(författare)
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Altered proteins in the aging brain
- 2016
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Ingår i: Journal of Neuropathology and Experimental Neurology. - : Oxford University Press. - 0022-3069 .- 1554-6578. ; 75:4, s. 316-325
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Tidskriftsartikel (refereegranskat)abstract
- We assessed the prevalence of common altered brain proteins in 296 cognitively unimpaired subjects ranging from age 50 to 102 years. The incidence and the stage of hyperphosphorylated-tau (HP tau), beta-amyloid, alpha-synuclein (alpha S), and transactive response DNA (TDP) binding protein 43 (TDP43)-immunoreactivity (-IR) increased with age. HP tau-IR was observed in 98% of the subjects; the locus coeruleus was solely affected in 46%, and 79% of the subjects were in Braak stages a to II. beta-Amyloid was seen in 47% of subjects and the Thal phase correlated with the HP tau Braak stage and age. Intermediate Alzheimer disease-related pathology (ADRP) was seen in 12%; 52% of the subjects with HP tau-IR fulfilled criteria for definite primary age-related tauopathy (PART). The incidence of concomitant pathology (alpha S, TDP43) did not differ between those with PART and those with ADRP but the former were younger. TDP43-IR was observed in 36%; the most frequently affected region was the medulla; alpha S-IR was observed in 19% of subjects. In 41% of the subjects from 80 to 89 years at death, 3 altered proteins were seen in the brain. Thus, altered proteins are common in the brains of cognitively unimpaired aged subjects; this should be considered while developing diagnostic biomarkers, particularly for identifying subjects at early stages of neurodegenerative diseases.
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| 10. |
- Elsir, Tamador, et al.
(författare)
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A study of embryonic stem cell-related proteins in human astrocytomas : Identification of Nanog as a predictor of survival
- 2014
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Ingår i: International Journal of Cancer. - : Wiley. - 0020-7136 .- 1097-0215. ; 134:5, s. 1123-1131
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Tidskriftsartikel (refereegranskat)abstract
- Recent studies suggest that the regulatory networks controlling the functions of stem cells during development may be abnormally active in human cancers. An embryonic stem cell (ESC) gene signature was found to correlate with a more undifferentiated phenotype of several human cancer types including gliomas, and associated with poor prognosis in breast cancer. In the present study, we used tissue microarrays of 80 low-grade (WHO grade II) and 98 high-grade human gliomas (WHO grade III and IV) to investigate the presence of the ESC-related proteins Nanog, Klf4, Oct4, Sox2 and c-Myc by immunohistochemistry. While similar patterns of co-expressed proteins between low- and high-grade gliomas were present, we found up-regulated protein levels of Nanog, Klf4, Oct4 and Sox2 in high-grade gliomas. Survival analysis by Kaplan-Meier analysis revealed a significant shorter survival in the subgroups of low-grade astrocytomas (n=42) with high levels of Nanog protein (p=0.0067) and of Klf4 protein (p=0.0368), in high-grade astrocytomas (n=85) with high levels of Nanog (p=0.0042), Klf4 (p=0.0447), and c-Myc (p=0.0078) and in glioblastomas only (n=71) with high levels of Nanog (p=0.0422) and of c-Myc (p= 0.0256). In the multivariate model, Nanog was identified as an independent prognostic factor in the subgroups of low-grade astrocytomas (p=0.0039), high-grade astrocytomas (p=0.0124) and glioblastomas only (p=0.0544), together with established clinical variables in these tumors. These findings provide further evidence for the joint regulatory pathways of ESC-related proteins in gliomas and identify Nanog as one of the key players in determining clinical outcome of human astrocytomas.
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