| 1. |
- Abarenkov, Kessy, et al.
(författare)
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PlutoF—a web based workbench for ecological and taxonomic research, with an online implementation for fungal ITS sequences
- 2010
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Ingår i: Evolutionary Bioinformatics. - 1176-9343. ; 6, s. 189-196
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Tidskriftsartikel (refereegranskat)abstract
- DNA sequences accumulating in the International Nucleotide Sequence Databases (INSD) form a rich source of information for taxonomic and ecological meta-analyses. However, these databases include many erroneous entries, and the data itself is poorly annotated with metadata, making it difficult to target and extract entries of interest with any degree of precision. Here we describe the web-based workbench PlutoF, which is designed to bridge the gap between the needs of contemporary research in biology and the existing software resources and databases. Built on a relational database, PlutoF allows remote-access rapid submission, retrieval, and analysis of study, specimen, and sequence data in INSD as well as for private datasets though web-based thin clients. In contrast to INSD, PlutoF supports internationally standardized terminology to allow very specific annotation and linking of interacting specimens and species. The sequence analysis module is optimized for identification and analysis of environmental ITS sequences of fungi, but it can be modified to operate on any genetic marker and group of organisms. The workbench is available at http://plutof.ut.ee.
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| 2. |
- Liston, Andrew, et al.
(författare)
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A review of West Palaearctic Hoplocampa species, focussing on Sweden (Hymenoptera, Tenthredinidae)
- 2019
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Ingår i: Zootaxa. - Auckland, New Zealand : Magnolia Press. - 1175-5326 .- 1175-5334. ; 4615:1, s. 1-45
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Tidskriftsartikel (refereegranskat)abstract
- Fourteen Hoplocampa species have been recorded in the West Palaearctic. We provide an illustrated key to these species, together with H. tadshikistanica, which is so far only known from Tadshikistan, but could occur in the West Palaearctic. The suitability of genetic sequencing for identification, particularly of larvae, is discussed. COI barcoding reliably distinguishes all European species which have been sampled (only H. phantoma lacks data), except for H. fulvicornis and H. minuta, which can be identified using nuclear sequences. Distributions in the Fennoscandian countries are outlined, with particular reference to Sweden. Hoplocampa chrysorrhoea is recorded for the first time in Scandinavia, from southern Sweden. Lectotypes are designated for twelve nominal taxa: Allantus ferrugineus Panzer, 1802, Hoplocampa chrysorrhoea var. nigrita Enslin, 1914, H. fabricii W. F. Kirby, 1882, H. oertzeni Konow, 1888, H. pectoralis Thomson, 1871, Hylotoma ferruginea Fabricius, 1804, Tenthredo alpina Zetterstedt, 1838, T. brevis Klug, 1816, T. chrysorrhoea Klug, 1816, T. crataegi Klug, 1816, T. plagiata Klug, 1816, and T. rutilicornis Klug, 1816. Hoplocampa minuta forma dudai Gregor, in Gregor & Bata, 1942 is a new synonym of H. fulvicornis (Panzer, 1801).
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| 3. |
- Liston, Andrew, et al.
(författare)
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New and poorly-known sawflies (Hymenoptera, Tenthredinoidea) from Sweden, with taxonomic notes on Palaearctic Heptamelus species described by Swedish authors.
- 2018
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Ingår i: Entomologisk Tidskrift. - Uppsala, Sweden. - 0013-886X. ; 139, s. 119-131
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Tidskriftsartikel (refereegranskat)abstract
- First records from Sweden of eight sawfly taxa are presented: Arge annulata Konow, 1891(Argidae), Allantus cingillipes (Kontuniemi, 1947), Allantus melanarius (Klug, 1818),Apethymus cereus (Klug, 1818), Dolerus liogaster schneideri Kiaer, 1898, Fenusella hortulana(Klug, 1818), Monophadnus spinolae (Klug, 1816), and Tenthredo mandibularisFabricius, 1804 (Tenthredinidae). The problematic taxonomic status of Arge annulata isdiscussed, and it is recorded for the first time from Germany and Estonia. For Heptamelusdahlbomi (Thomson, 1870) (Heptamelidae): a lectotype is designated for Caenoneuradahlbomi, H. ussuriensis Malaise, 1931 is placed as its junior synonym, Athyrium distentifoliumrecorded as a new host, and additional distribution data are presented, including thefirst records from Austria. A lectotype is designated for Heptamelus magnocularis Malaise,1931, and this species briefly compared with H. dahlbomi.
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| 4. |
- Liston, Andrew, et al.
(författare)
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North European gall-inducing Euura sawflies (Hymenoptera, Tenthredinidae, Nematinae)
- 2017
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Ingår i: Zootaxa. - Auckland, New Zealand : Magnolia Press. - 1175-5326 .- 1175-5334. ; 4302, s. 1-115
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Recension (refereegranskat)abstract
- The sawfly genus Euura of the tenthredinid subfamily Nematinae, in which species level taxonomy has long been regarded as controversial, is particularly species rich in northern parts of the Holarctic. Among a majority of species with more or less free-living larvae, a sizeable minority belongs to a monophyletic lineage whose larvae complete their whole development in galls. We present illustrated keys to the adults and galls of 66 gall-inducing Euura species that occur, or might occur, in northern Europe. The distribution of these species is briefly reviewed, with an emphasis on the fauna of Sweden, where 55 species are now definitely recorded, two of them for the first time (E. bigallae, E. myrtilloidica). The species-level taxonomy of gall-inducing Euura remains partly problematic. Nominal species described on the basis of experimentally tested or assumed host plant specificity, but which cannot be recognised using morphological or genetic characters, are treated as conspecific with currently indistinguishable segregates ("host-plant races") associated with other Salix species. 20 new synonymies are proposed (valid names in parentheses): Eupontania acutifoliae baltica Vikberg & Zinovjev, 2006 and Pontania acutifoliae daphnoides Zinovjev, 1993 (Euura acutifoliae(Zinovjev, 1985)), Euura boreoalpina Kopelke, 2001 (Euura lanatae Malaise, 1921), Euura cinereae Kopelke, 1996 preoccupied and Euura lapponica Kopelke, 1996 preoccupied (Euura auritae Kopelke 2000), Euura gemmacinereae Kopelke, 2001 and E. nigritarsis Cameron, 1885 (Euura mucronata (Hartig, 1837)), Euura phylicifoliaeKopelke, 2001 (Euura myrsinifoliae Kopelke, 2001), Nematus westermanni Boheman, 1852 nomen oblitum (Euura scotaspis (Förster, 1854) nomen protectum), Nematus acerosus Hartig, 1840 (Euura saliciscinereae (Retzius, 1783)), Nematus alienatusFörster, 1854 and Phyllocolpa rolleri Liston, 2005 (Euura leucapsis (Tischbein, 1846)), Nematus angustus Hartig, 1837 (Euura atra (Jurine, 1807)), Nematus erythropygusFörster, 1854 (Euura leucosticta (Hartig, 1837)), Nematus impunctatus Herrich-Schäffer, 1840 (Euura amerinae (Linnaeus, 1758)), Pontania carinifrons Benson, 1940 and Phyllocolpa plicaglauca Kopelke, 2007 (Euura destricta (MacGillivray, 1923)), Pontania obscura Kopelke, 2005 (Euura bridgmanii (Cameron, 1883)), Pontania viminalis var. lugubris Enslin, 1918 and Eupontania collactanea rosmarinifoliae Vikberg & Zinovjev, 2006 (Euura collactanea (Förster, 1854)). Euura weiffenbachiella nom. nov. is proposed as a replacement name for Euura weiffenbachii Ermolenko, 1988; preoccupied in Euuraby Pteronidea weiffenbachi Lindqvist, 1958 (Euura piliserra (Thomson, 1863)). Lectotypes are designated for the following 9 taxa: Euura insularis Kincaid, 1900, Euura lanatae Malaise, 1921, Euura lappo Malaise, 1921, Euura lappo var. hastatae Malaise, 1921, Nematus acerosus Hartig, 1840, Nematus leptocerus Förster, 1854, Nematus vallisnierii Hartig, 1837, Pontania megacephala Rohwer, 1908, and Pontania piliserra var. mascula Enslin, 1915. Because of secondary homonymy within Euura, the valid name of the Nearctic species E. arctica MacGillivray, 1919 is E. delicatula (MacGillivray, 1919). The Nearctic Euura megacephala is removed from synonymy with the Holarctic E. destricta and treated as a valid species. 34 species names are newly combined with Euura.
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| 5. |
- Liston, Andrew, et al.
(författare)
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The West Palaearctic Dineura species, focussing on Sweden (Hymenoptera, Tenthredinidae)
- 2019
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Ingår i: Zootaxa. - Auckland, New Zealand : Magnolia Press. - 1175-5326 .- 1175-5334. ; 4612:4, s. 501-517
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Tidskriftsartikel (refereegranskat)abstract
- Four Dineura species are now considered to occur in the West Palaearctic, including northern Europe, but D. parcivalvis has not been found in Scandinavia. Dineura pullior Schmidt & Walter, 1995 is treated as a new junior subjective synonym of D. virididorsata (Retzius, 1783). An illustrated key to adults is presented. Lectotypes are designated for seven nominal taxa: Dineura stilata var. virilis Enslin, 1918, Dineura testaceipes var. nigriventris Enslin, 1915, Dineura virididorsata var. dorsalis Enslin, 1915, Nematus posticus Förster, 1854, Nematus xanthocerus Hartig, 1840, Nematus xanthopus Zaddach, 1876, and Tenthredo (Allantus) stilata Klug, 1816. Distributions in the Fennoscandian countries are outlined, with particular reference to Sweden.
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| 6. |
- Liston, Andrew, et al.
(författare)
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The West Palaearctic Pseudodineura and Endophytus species (Hymenoptera, Tenthredinidae)
- 2019
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Ingår i: Zootaxa. - Auckland, New Zealand : Magnolia Press. - 1175-5326 .- 1175-5334. ; 4614:3, s. 511-528
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Tidskriftsartikel (refereegranskat)abstract
- Six valid species of Pseudodineura are now recognised as occurring in the West Palaearctic, and the only described species of the related genus Endophytus. Larvae of all species are leaf-miners in Ranunculaceae. An identification key to adults is provided, followed by species commentaries which include summarised data on taxonomy, larval host plants, and distribution, with particular reference to Sweden. Whereas identification of some specimens using morphological characters may not be possible, each species apparently has a distinct COI barcode sequence. Pseudodineura heringi(Enslin, 1921) is a new junior synonym of P. parvula (Klug, 1816). Pseudodineura mocsaryi Zombori, 1976 and P. scaligera Zombori, 1979 are new junior synonyms of P. clematidisrectae Hering, 1935. Lectotypes are designated for: Dolerus minutus Hartig, 1837, Pelmatopus clematidis Hering, 1932, P. enslini Hering, 1923, P. heringi Enslin, 1921, and P. mentiens var. konowi Enslin, 1921.
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| 7. |
- Prous, Marko, et al.
(författare)
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Sawflies (Hymenoptera, Symphyta) newly recorded from Sweden
- 2014
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Ingår i: Entomologisk Tidskrift. - Sverige : Sveriges Entomologiska Förening. - 0013-886X. ; 135:3, s. 135-146
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Tidskriftsartikel (refereegranskat)abstract
- The first records from Sweden of 15 species of sawfly are presented: 2 species of Pamphiliidae,1 Argidae, 11 Tenthredinidae and 1 Cimbicidae. Of these, Empria camtschaticaand E. plana are also recorded for the first time in Europe. An illustrated key is providedto distinguish them from similar species (E. immersa, E. fletcheri). Rhogogaster polarisLindqvist, 1964 is treated as a valid species (species revocata). The number of Symphytaspecies that occur in Sweden and possible deficits in recording strategies are discussed.
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| 8. |
- Prous, Marko, et al.
(författare)
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The genera of Nematinae (Hymenoptera, Tenthredinidae)
- 2014
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Ingår i: Journal of Hymenoptera Research. - Sofia, Bulgaria : Pensoft Publishers. - 1314-2607. ; 40, s. 1-69
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Tidskriftsartikel (refereegranskat)abstract
- Recent phylogenetic studies on Nematinae based on DNA sequences have shown extensive incongruencies with current nomenclature of genus-group taxa. Here, we expand previous DNA sequence datasets based on three genes (CoI, Cytb, and EF-1α), to include a fourth (NaK) and more genera. The analyses largely confirm the previous findings, particularly the existence of two well-supported large clades, Euura and Pristiphora, together comprising more than 75% of the species of Nematinae. Basal relationships within these two clades remain poorly resolved, mirroring the difficulties in delimiting genera based on morphology. In addition, a moderately supported small clade, Nematus, is found. The relationships between the Euura, Pristiphora, and Nematus clades are uncertain. Therefore, to stabilize the nomenclature we treat these clades as genera. This taxonomic treatment results in numerous new combinations of species names. The following synonymies are proposed for the available genus-group names. Synonyms of Euura Newman, 1837: Cryptocampus Hartig, 1837, Euura Agassiz, 1848, Pontania Costa, 1852, syn. n., Epitactus Förster, 1854, syn. n., Amauronematus Konow, 1890, syn. n., Holcocneme Konow, 1890, syn. n., Pachynematus Konow, 1890, syn. n., Holcocnema Schulz, 1906, syn. n., Holcocnemis Konow, 1907, syn. n., Pteronidea Rohwer, 1911, syn. n., Pontopristia Malaise, 1921, syn. n., Brachycoluma Strand, 1929, syn. n., Decanematus Malaise, 1931, syn. n., Pikonema Ross, 1937, syn. n., Phyllocolpa Benson, 1960, syn. n., Eitelius Kontuniemi, 1966, syn. n., Gemmura E.L. Smith, 1968, Eupontania Zinovjev, 1985, syn. n., Larinematus Zhelochovtsev, 1988, syn. n., Polynematus Zhelochovtsev, 1988, syn. n., Bacconematus Zhelochovtsev, 1988, syn. n., Alpinematus Lacourt, 1996, syn. n., Epicenematus Lacourt, 1998, syn. n., Kontuniemiana Lacourt, 1998, syn. n., Lindqvistia Lacourt, 1998, syn. n., Luea Wei and Nie, 1998, syn. n., and Tubpontania Vikberg, 2010, syn. n. Synonyms of Nematus Panzer, 1801: Craesus Leach, 1817, Hypolaepus W.F. Kirby, 1882, and Paranematus Zinovjev, 1978. Synonyms of Pristiphora Latreille, 1810: Diphadnus Hartig, 1837, Lygaeonematus Konow, 1890, Micronematus Konow, 1890, Gymnonychus Marlatt, 1896, Neopareophora MacGillivray, 1908, syn. n., Neotomostethus MacGillivray, 1908, Dineuridea Rohwer, 1912, Sala Ross, 1937, Pristola Ross, 1945, syn. n., Nepionema Benson, 1960, syn. n., Melastola Wong, 1968, syn. n., Sharliphora Wong, 1969, Oligonematus Zhelochovtsev, 1988, Lygaeotus Liston, 1993, Lygaeophora Liston, 1993, and Pristicampus Zinovjev, 1993, syn. n. Varna Ross, 1937, syn. n. is treated as a synonym of Dineura Dahlbom 1835. Stauronematus Benson, 1953 is treated as a separate genus from Pristiphora. Names of 20 species-group taxa are junior secondary homonyms when combined with Euura. Replacement names are proposed for these. To facilitate the identification of Nematinae genera, we provide an illustrated key to the 31 extant genera of world Nematinae.
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| 9. |
- Prous, Marko, et al.
(författare)
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The West Palaearctic genera of Nematinae (Hymenoptera, Tenthredinidae)
- 2019
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Ingår i: ZooKeys. - Sofia, Bulgaria : Pensoft Publishers. - 1313-2989 .- 1313-2970. ; 875, s. 63-127
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Tidskriftsartikel (refereegranskat)abstract
- Keys to adults and larvae of the genera of West Palaearctic nematine sawflies are presented. Species of some of the smaller genera are keyed, and their taxonomy, distribution, and host plants reviewed, with a geographic focus on north-western Europe, particularly Sweden. Dinematus Lacourt, 2006 is a new junior subjective synonym of Pristiphora Latreille, 1810, resulting in the new combination Pristiphora krausi (Lacourt, 2006) for the type species of Dinematus. Hemichroa monticola Ermolenko, 1960 is a new junior subjective synonym of Hemichroa australis (Serville, 1823). Lectotypes are designated for Tenthredo opaca Fabricius, 1775, Mesoneura opaca var. nigerrima Enslin, 1914, Mesoneura opaca var. obscuriventris Enslin, 1914, Nematus hypogastricus Hartig, 1837, Nematus alnivorus Hartig, 1840, Leptopus rufipes Förster, 1854, Nematus protensus Förster, 1854, and Platycampus luridiventris var. pleuritica Enslin, 1915. A phylogenetic analysis based on four genes (mitochondrial COI and nuclear NaK, POL2, and TPI) supports the current generic classification.
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| 10. |
- Schmidt, Stefan, et al.
(författare)
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Identification of sawflies and horntails (Hymenoptera, ‘Symphyta’) through DNA barcodes: successes and caveats
- 2017
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Ingår i: Molecular Ecology Resources. - : Wiley. - 1755-098X .- 1755-0998. ; 17, s. 670-685
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Tidskriftsartikel (refereegranskat)abstract
- The ‘Symphyta’ is a paraphyletic assemblage at the base of the order Hymenoptera, comprising 14 families and about 8750 species. All have phytophagous larvae, except for the Orussidae, which are parasitoids. This study presents and evaluates the results of DNA barcoding of approximately 5360 specimens of ‘Symphyta’, mainly adults, and 4362 sequences covering 1037 species were deemed of suitable quality for inclusion in the analysis. All extant families are represented, except for the Anaxyelidae. The majority of species and specimens are from Europe, but approximately 38% of the species and 13% of the specimens are of non-European origin. The utility of barcoding for species identification and taxonomy of ‘Symphyta’ is discussed on the basis of examples from each of the included families. A significant level of cryptic species diversity was apparent in many groups. Other attractive applications include the identification of immature stages without the need to rear them, community analyses based on metabarcoding of bulk samples and association of the sexes of adults.
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