| 1. |
- Andersson, Magnus, et al.
(författare)
-
Fiskbestånd och miljö i hav och sötvatten : Resurs- och miljööversikt 2012
- 2012
-
Rapport (övrigt vetenskapligt/konstnärligt)abstract
- Detta är den nionde utgåvan av den samlade översikten över fisk- och kräftdjursbeståndens status i våra vatten. Kunskap om fiskbestånden och miljön är en förutsättning för att utnyttjandet av fiskresurserna skall bli bärkraftigt. För svenska vattenområden beskrivs miljöutvecklingen i ett ekosystemsperspektiv, dels för att tydliggöra fiskens ekologiska roll och beskriva yttre miljöfaktorer som påverkar fiskbestånden, dels för att belysa fiskets effekter på miljön.Fiskbestånd och miljö i hav och sötvatten är utarbetad av Sveriges lantbruksuniversitet (SLU), Institutionen för akvatiska resurser (SLU Aqua), på uppdrag av Havs- och vattenmyndigheten. Rapporten sammanfattar utveckling och beståndsstatus för de kommersiellt viktigaste fisk- och kräftdjursarterna i våra vatten. Bedömningar och förvaltningsråd är baserade på Internationella Havsforskningsrådets (ICES) rådgivning, SLU Aquas nationella och regionala provfiskedata, samt yrkesfiskets rapportering.
|
|
| 2. |
- Bergström, Ulf, et al.
(författare)
-
Long-term decline in northern pike (Esox lucius L.) populations in the Baltic Sea revealed by recreational angling data
- 2022
-
Ingår i: Fisheries Research. - : Elsevier BV. - 0165-7836 .- 1872-6763. ; 251
-
Tidskriftsartikel (refereegranskat)abstract
- In the Baltic Sea, the large predatory fish northern pike (Esox lucius L.) is important for both recreational fisheries and ecosystem functioning. As existing fishery-independent surveys do not adequately monitor pike populations, a general lack of knowledge on population status and trends poses challenges for management. Here we use recreational angling data as an alternative method to describe pike population development along the Swedish Baltic Sea coast from 1938 onwards and assess the change over time in potential mortality factors by estimating harvest by fisheries and consumption by large predators. Data from a Swedish national register on trophy-sized pike (>12 kg) showed that numbers and maximum sizes peaked in 1990-1995, after which declines in both metrics are evident. In logbooks from a sport fishing club in the Stockholm archipelago, a simultaneous decrease in maximum sizes of pike was observed, together with a decrease in the total number of pike caught per fishing day. Jointly, these data indicate a decline in the abundance of large pike since around 1990. While commercial pike fisheries in the Baltic Sea have decreased continuously since the 1950s, recreational fishing increased after 1985, when Swedish coastal waters were made open access to anglers. The declines in large pike starting in the 1990s could, thus, have been driven by an increase in mortality from recreational fisheries, which at the time primarily practiced catch and kill. Since the 2000s, bag and slot length limits, spawning closures, and a general increase in catch-and-release fishing has reduced the landings of pike in recreational fisheries. Despite these fisheries regulations and higher release rates the decline in catches of large pike has continued, indicating an effect of other mortality factors. The strong growth of grey seal (Halichoerus grypus) and great cormorant (Phalacrocorax carbo sinensis) populations suggest that predation pressure on pike has increased over time. In the Stockholm archipelago these two predators were estimated to remove 5-18 times (range based on different diet composition estimates) more pike biomass than total fisheries landings in 2014-2017. To improve the situation for northern pike in the Baltic Sea managers need to consider both fisheries restrictions and measures to decrease predation pressure and increase recruitment. Catch data from recreational fisheries may be used to evaluate such management efforts by providing information on the population development of this keystone species.
|
|
| 3. |
- Bridel, Claire, et al.
(författare)
-
Diagnostic Value of Cerebrospinal Fluid Neurofilament Light Protein in Neurology : A Systematic Review and Meta-analysis
- 2019
-
Ingår i: JAMA Neurology. - : American Medical Association (AMA). - 2168-6149 .- 2168-6157. ; 76:9, s. 1035-1048
-
Forskningsöversikt (refereegranskat)abstract
- Importance Neurofilament light protein (NfL) is elevated in cerebrospinal fluid (CSF) of a number of neurological conditions compared with healthy controls (HC) and is a candidate biomarker for neuroaxonal damage. The influence of age and sex is largely unknown, and levels across neurological disorders have not been compared systematically to date.Objectives To assess the associations of age, sex, and diagnosis with NfL in CSF (cNfL) and to evaluate its potential in discriminating clinically similar conditions.Data Sources PubMed was searched for studies published between January 1, 2006, and January 1, 2016, reporting cNfL levels (using the search terms neurofilament light and cerebrospinal fluid) in neurological or psychiatric conditions and/or in HC.Study Selection Studies reporting NfL levels measured in lumbar CSF using a commercially available immunoassay, as well as age and sex.Data Extraction and Synthesis Individual-level data were requested from study authors. Generalized linear mixed-effects models were used to estimate the fixed effects of age, sex, and diagnosis on log-transformed NfL levels, with cohort of origin modeled as a random intercept.Main Outcome and Measure The cNfL levels adjusted for age and sex across diagnoses.Results Data were collected for 10 059 individuals (mean [SD] age, 59.7 [18.8] years; 54.1% female). Thirty-five diagnoses were identified, including inflammatory diseases of the central nervous system (n = 2795), dementias and predementia stages (n = 4284), parkinsonian disorders (n = 984), and HC (n = 1332). The cNfL was elevated compared with HC in a majority of neurological conditions studied. Highest levels were observed in cognitively impaired HIV-positive individuals (iHIV), amyotrophic lateral sclerosis, frontotemporal dementia (FTD), and Huntington disease. In 33.3% of diagnoses, including HC, multiple sclerosis, Alzheimer disease (AD), and Parkinson disease (PD), cNfL was higher in men than women. The cNfL increased with age in HC and a majority of neurological conditions, although the association was strongest in HC. The cNfL overlapped in most clinically similar diagnoses except for FTD and iHIV, which segregated from other dementias, and PD, which segregated from atypical parkinsonian syndromes.Conclusions and Relevance These data support the use of cNfL as a biomarker of neuroaxonal damage and indicate that age-specific and sex-specific (and in some cases disease-specific) reference values may be needed. The cNfL has potential to assist the differentiation of FTD from AD and PD from atypical parkinsonian syndromes.
|
|
| 4. |
- Ekman, Pia, et al.
(författare)
-
Two methods to avoid the effect of endogenous inhibitors during the assay of protein kinase C activity in tissue extracts.
- 1992
-
Ingår i: Preparative Biochemistry. - : Informa UK Limited. - 0032-7484. ; 22:2, s. 165-175
-
Tidskriftsartikel (refereegranskat)abstract
- Using H1 as substrate the protein kinase C activity of rat liver cell sap was increased about fourfold by treatment with DEAE-cellulose at pH 7.5 at an intermediate ionic strength due to removal of protein inhibitors. The activity of cell sap from rat spleen, brain or muscle was about doubled by the same treatment. In contrast, when a specific synthetic peptide substrate was used the corresponding increase of enzyme activity was not obtained when the inhibitors were removed. This shows that this type of substrates should be preferred for reliable assays of protein kinase C in crude extracts. The possible role of the protein inhibitors for the substrate specificity of protein kinase C is briefly discussed.
|
|
| 5. |
- Eller, Marika, et al.
(författare)
-
Peptide fragments of myelin basic protein as substrates of protein kinase C.
- 1992
-
Ingår i: Biochemistry International. - 0158-5231. ; 27:4, s. 625-631
-
Tidskriftsartikel (refereegranskat)abstract
- A set of peptides derived from myelin basic protein was synthesized and the kinetics of their phosphorylation by protein kinase C was studied. The replacement or the removal of the N-terminal Gln had no effect on the activity of the parent peptide. The removal of the following Lys or Arg led to a systematic decrease in substrate activity. The modifications in the C-terminal part of the peptide had a weaker influence on the parameters Vmax and KM than those in the N-terminal. The rather regular dependence of the activity of substrates upon their structure does not allow the strict definition of a minimum substrate for protein kinase C.
|
|
| 6. |
- Eller, Marika, et al.
(författare)
-
Studies on the substrate specificity of cAMP-dependent protein kinase using diastereomeric peptides
- 1991
-
Ingår i: Biochemistry International. - 0158-5231. ; 25:3, s. 453-460
-
Tidskriftsartikel (refereegranskat)abstract
- A set of six different diastereomeric hexapeptides RRASVA, each with a D-amino acid residue successively in the six positions, was synthesized and tested as substrates of protein kinase A. It was found that the peptide with D-Ser was neither a substrate, nor an inhibitor of the enzyme. The other five peptides were active as substrates with slightly lower kcat values than that of the all-L amino acid peptide. However, the apparent Km values increased by one to two orders of magnitude, especially when the second arginine or the alanine residue preceding the serine was substituted. The results are discussed.
|
|
| 7. |
- Eller, Marika, et al.
(författare)
-
Substrate specificity of protein kinase C studied with peptides containing D-amino acid residues.
- 1993
-
Ingår i: Journal of Biochemistry. - 0021-924X. ; 114:2, s. 177-180
-
Tidskriftsartikel (refereegranskat)abstract
- A set of stereoisomeric nonapeptides KRPSQRAKY with one, two, or all L-amino acid residues replaced by the corresponding D-amino acids, and two analogs with L- and D-threonine instead of serine, were synthesized and tested as substrates for protein kinase C. All of the peptides were phosphorylated by the enzyme. The maximal rate of the reaction with the all-D peptide was more than one order of magnitude lower than that for all-L peptide with serine. The same applied to the peptides with D-Ser or with D-Arg in position +2 with respect to Ser. The Km values for the peptides containing one D-amino acid were close to that for the prototype peptide (53 microM). On the other hand, when two or more D-amino acids were present, the Km value increased considerably. Replacement of serine by threonine also reduced the phosphorylation rate and increased the Km values. One can conclude that the stereospecificity of protein kinase C is much less pronounced than that of protein kinase A, which is in agreement with the less clearly pronounced substrate specificity of the former enzyme.
|
|
| 8. |
|
|
| 9. |
- Humble, Elisabet, et al.
(författare)
-
Amino acid sequence at the phosphorylated site of rat liver fructose-1,6-diphosphatase and phosphorylation of a corresponding synthetic peptide
- 1979
-
Ingår i: Biochemical and Biophysical Research Communications - BBRC. - 0006-291X .- 1090-2104. ; 90:3, s. 1064-1072
-
Tidskriftsartikel (refereegranskat)abstract
- Rat liver fructose-1,6-diphosphatase was phosphorylated with (32P)ATP and the catalytic subunit of cyclic AMP-dependent protein kinase from pig muscle. After digestion with pepsin, α-chymotrypsin and subtilisin a peptide with the amino-terminal sequence Ser-Arg-Tyr-(32P)SerP-Leu-Pro-Leu-Pro was isolated. A synthetic unphosphorylated heptapeptide with the same amino acid sequence, ending with leucine, was phosphorylated with an apparent Km of 400 μM, while the apparent Km value for fructose-1,6-diphosphatase was 30 μM (subunit concentration). The Vmax value was 20 times higher for the peptide than for the enzyme.
|
|
| 10. |
- Loog, Mart, et al.
(författare)
-
Comparision of substrate specificities of protein kinases A and C based on peptide substrates
- 1994
-
Ingår i: Bioorganic chemistry. - : Elsevier BV. - 0045-2068. ; 22:3, s. 328-336
-
Tidskriftsartikel (refereegranskat)abstract
- Peptides, obtained by gradual removal of amino acids from both ends of pEKRPSQRSKYL, and stereoisomeric nonapeptides KRPSQRAKY with one D-amino acid residue successively in each position, were tested as substrates for protein kinase A, All these compounds were phosphorylated but at quite different rates by the enzyme. Comparison of the kinetic data with the appropriate results for protein kinase C, measured earlier, was used to analyze and compare the specificity determining factors of these enzymes. The analysis of the cross-specificity points to the possibility that only a short part, mainly the sequence of 1 to 2 amino acids around the phosphorylatable serine residue, is important for differentiation of substrates by these enzymes, while the remaining part of the peptide structure has similar influence on their reactivity in the case of these two protein kinases. Thus, the active center of these enzymes can be conventionally divided into two parts, which are responsible for selectivity and effectiveness of the phosphorylation reaction, respectively.
|
|
