| 1. |
- Andreasen, Katarina, et al.
(författare)
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Successful DNA amplification of a more than 200-year-old herbarium specimen : recovering genetic material from the Linnaean era
- 2009
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Ingår i: Taxon. - 0040-0262 .- 1996-8175. ; 58:3, s. 959-962
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Tidskriftsartikel (refereegranskat)abstract
- The limit for successful DNA extraction was tested by amplification and sequencing of an over 200-year-old herbarium specimen collected by Adam Afzelius, a student of Carl Linnaeus. We amplified and sequenced a 800-bp region between 16S ribosomal DNA and the 3′ part of the trnI gene (16S-trnI) in the chloroplast genomeof Phaulopsis talbotii S. Moore (Acanthaceae). To test the replicability and to control for contamination the procedure was performed in sealed vials and with negative PCR controls. The procedure was also repeated in a separate laboratory. In addition, the chloroplast rpl16 intron was successfully amplified and sequenced and the rps16 intron amplified. Sequences of taxa closely related to Acanthaceae were found to be most similar to the produced sequences. The results suggest that molecular investigations of other 18th century botanical collections are feasible and that molecular methods could be employed for comparative studies to extant plant collections. An important application would be to identify descendants or clones of Linnaean lectotypes by comparing DNA from these with potentially remnant plants from Linnaeus’ cultivations.
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| 2. |
- Andriambololonera, Sylvie Renée, et al.
(författare)
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Mussaendeae-Sabiceeae clade (subfamily Ixoroideae)
- 2022
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Ingår i: The new Natural History of Madagascar. - USA : Princeton University Press. ; , s. 756-758
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Bokkapitel (övrigt vetenskapligt/konstnärligt)
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| 3. |
- Andriamihajarivo, Tefy H., et al.
(författare)
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Phyllopentas flava (Rubiaceae), a New Morphologically Heterodistylous and Functionally Dioecious Species from Madagascar
- 2011
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Ingår i: Systematic Botany. - 0363-6445 .- 1548-2324. ; 36:4, s. 1024-1027
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Tidskriftsartikel (refereegranskat)abstract
- A new species of the Afro-Malagasy genus Phyllopentas Karehed & B. Bremer, Phyllopentas flava Razafim., T. Andriam. et Karehed, is described and illustrated. This plant is restricted to the Itremo region in southeastern Madagascar and is distinct morphologically from the other species of the genus by its pubescent, narrowly ovate to narrowly elliptic leaves, grey-whitish and thickly hairy midribs and secondary veins on the lower surfaces of leaves, and functionally dioecious and heterodistylous flowers. Summaries of distribution, phenology, habitat, and ecology are given and a conservation assessment is also provided.
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| 4. |
- Appelhans, Marc S., et al.
(författare)
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Age and historical biogeography of the pantropically distributed Spathelioideae (Rutaceae, Sapindales)
- 2012
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Ingår i: Journal of Biogeography. - : Wiley. - 0305-0270 .- 1365-2699. ; 39:7, s. 1235-1250
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Tidskriftsartikel (refereegranskat)abstract
- Aim The family Rutaceae (rue family) is the largest within the eudicot order Sapindales and is distributed mainly in the tropical and subtropical regions of both the New World and the Old World, with a few genera in temperate zones. The main objective of this study is to present molecular dating and biogeographical analyses of the subfamily Spathelioideae, the earliest branching clade (which includes eight extant genera), to interpret the temporal and spatial origins of this group, ascertaining possible vicariant patterns and dispersal routes and inferring diversification rates through time. Location Pantropics. Methods A dataset comprising a complete taxon sampling at generic level (83.3% at species level) of Spathelioideae was used for a Bayesian molecular dating analysis (beast). Four fossil calibration points and an age constraint for Sapindales were applied. An ancestral area reconstruction analysis utilizing the dispersalextinctioncladogenesis model and diversification rate analyses was conducted. Results Dating analyses indicate that Rutaceae and Spathelioideae are probably of Late Cretaceous origin, after which Spathelioideae split into a Neotropical and a Palaeotropical lineage. The Palaeotropical taxa have their origin inferred in Africa, with postulated dispersal events to the Mediterranean, the Canary Islands, Madagascar and Southeast Asia. The lineages within Spathelioideae evolved at a relatively constant diversification rate. However, abrupt changes in diversification rates are inferred from the beginning of the Miocene and during the Pliocene/Pleistocene. Main conclusions The geographical origin of Spathelioideae probably lies in Africa. The existence of a Neotropical lineage may be the result of a dispersal event at a time in the Late Cretaceous when South America and Africa were still quite close to each other (assuming that our age estimates are close to the actual ages), or by Gondwanan vicariance (assuming that our age estimates provide minimal ages only). Separation of land masses caused by sea level changes during the Pliocene and Pleistocene may have been triggers for speciation in the Caribbean genus Spathelia.
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| 5. |
- Appelhans, M. S., et al.
(författare)
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Phylogeny, evolutionary trends and classification of the Spathelia-Ptaeroxylon clade : morphological and molecular insights
- 2011
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Ingår i: Annals of Botany. - : Oxford University Press (OUP). - 0305-7364 .- 1095-8290. ; 107:8, s. 1259-1277
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Tidskriftsartikel (refereegranskat)abstract
- Background and Aims The Spathelia-Ptaeroxylon clade is a group of morphologically diverse plants that have been classified together as a result of molecular phylogenetic studies. The clade is currently included in Rutaceae and recognized at a subfamilial level (Spathelioideae) despite the fact that most of its genera have traditionally been associated with other families and that there are no obvious morphological synapomorphies for the clade. The aim of the present study is to construct phylogenetic trees for the Spathelia-Ptaeroxylon clade and to investigate anatomical characters in order to decide whether it should be kept in Rutaceae or recognized at the familial level. Anatomical characters were plotted on a cladogram to help explain character evolution within the group. Moreover, phylogenetic relationships and generic limits within the clade are also addressed. Methods A species-level phylogenetic analysis of the Spathelia-Ptaeroxylon clade based on five plastid DNA regions (rbcL, atpB, trnL-trnF, rps16 and psbA-trnH) was conducted using Bayesian, maximum parsimony and maximum likelihood methods. Leaf and seed anatomical characters of all genera were (re) investigated by light and scanning electron microscopy. Key Results With the exception of Spathelia, all genera of the Spathelila-Ptaeroxylon clade are monophyletic. The typical leaf and seed anatomical characters of Rutaceae were found. Further, the presence of oil cells in the leaves provides a possible synapomorphy for the clade. Conclusions The Spathelia-Ptaeroxylon clade is well placed in Rutaceae and it is reasonable to unite the genera into one subfamily (Spathelioideae). We propose a new tribal classification of Spathelioideae. A narrow circumscription of Spathelia is established to make the genus monophyletic, and Sohnreyia is resurrected to accommodate the South American species of Spathelia. The most recent common ancestor of Spathelioideae probably had leaves with secretory cavities and oil cells, haplostemonous flowers with appendaged staminal filaments, and a tracheidal tegmen.
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| 6. |
- Atalahy, Anselme M., et al.
(författare)
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Nouvelles espèces du genre Pyrostria (Rubiaceae, Vanguerieae) de Madagascar
- 2021
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Ingår i: Candollea. - : Society of Conservatoire at Jardin Botaniques de la Ville de Geneve. - 0373-2967 .- 2235-3658. ; 76:1, s. 1-12
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Tidskriftsartikel (refereegranskat)abstract
- In the course of a taxonomic revision of the genus Pyrostria Comm. ex Juss. (Rubiaceae, Vanguerieae) in Madagascar, we describe five new species endemic from the Island: Pyrostria ambohitantelensis Atalahy, Rakotonas. & Razafim., Pyrostria ambrensis Atalahy, Rakotonas. & Razafim., Pyrostria betsomangensis Atalahy, Rakotonas. & Razafim., Pyrostria coriacea Atalahy, Rakotonas. & Razafim. and Pyrostria longicorollata Atalahy, Rakotonas. & Razafim. Each new species is provided with line drawings, a discussion on its morphological affinities and a risk of extinction assessment based on the IUCN Red List criteria.
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| 7. |
- Atalahy, Anselme, et al.
(författare)
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Un nouveau nom dans la tribu des Vanguerieae (Rubiaceae) de Madagascar
- 2020
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Ingår i: Candollea. - 0373-2967 .- 2235-3658. ; 75:1, s. 71-73
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Tidskriftsartikel (refereegranskat)abstract
- A variety of the Malagasy genus Canthium Lam. (Rubiaceae, Vanguerieae), Canthium perrieri var. louvelii Cavaco, is transferred to the genus Pyrostria Comm. ex Juss. because, like the typical variety already transferred in this genus, it shares its distinctive characters (inflorescences or solitary flowers involucrate). This taxon is further raised to species level, as it is morphologically distinct from Pyrostria perrieri (Cavaco) Razafim. et al. We provide the necessary new replacement name: Pyrostria orientalis A. Atalahy, Rakotanas. & Razafim., since the epithet louvelii is already occupied in Pyrostria.
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| 8. |
- Bengtson, Annika, et al.
(författare)
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New subtribal and generic limits in the tribe Athroismeae (Asteraceae) and further disintegration of the subtribe Madagasterinae of the tribe Astereae
- 2024
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Ingår i: Willdenowia. - 0511-9618 .- 1868-6397. ; 54:1, s. 103-116
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Tidskriftsartikel (refereegranskat)abstract
- The Astereae subtribe Madagasterinae (Asteraceae) sensu Nesom encompassing four Malagasy genera (Apodocephala, Madagaster, Rochonia and Vernoniopsis) is polyphyletic, as Apodocephala is a member of the Malagasy subtribe Lowryanthina of the tribe Athroismeae. While Madagaster was shown to belong to Astereae, the phylogenetic positions of Rochonia and Vernoniopsis (now Jalantzia) in this tribe remained to be tested with molecular data. Lowryanthinae presently contains Apodocephala with nine species and the monospecific Lowryanthus. The monophyly of Apodocephala remained to be assessed using a comprehensive sampling. The aims were to: (1) assess the phylogenetic placements of Rochonia and Jalantzia (Vernoniopsis) and test the monophyly of Jalantzia; (2) assess phylogenetic relationships within Lowryanthinae; and (3) re-assess the subtribal and generic limits within the tribe Athroismeae. New phylogenetic analyses based on plastid sequence data confirmed the position of Rochonia in Astereae. Jalantzia (Vernoniopsis) was resolved as sister to the subtribe Lowryanthinae and therefore transferred to Athroismeae. A new subtribe, Jalantziinae, is described to accommodate Jalantzia. Apodocephala is paraphyletic with respect to Lowryanthus, which is formally merged with Apodocephala. A description of the emended subtribe Madagasterinae containing Madagaster and Rochonia is presented.
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| 9. |
- Bengtson, Annika, et al.
(författare)
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The Malagasy enigmatic genus Apodocephala (Asteraceae), a new member of the tribe Athroismeae
- 2021
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Ingår i: Willdenowia. - : Botanic Garden and Botanical Museum Berlin, Freie Universitaet Berlin. - 0511-9618 .- 1868-6397. ; 51:2, s. 221-230
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Tidskriftsartikel (refereegranskat)abstract
- Apodocephala is a small genus of nine species of shrubs and trees endemic to Madagascar and currently classified in the tribe Astereae (Asteraceae). However, its present tribal position has been questioned, as it lacks some of the salient morphological features of that tribe. This study includes for the first time DNA sequences from Apodocephala (two species including the type of the generic name) to test its phylogenetic position. Phylogenetic analyses based on sequence data from nuclear ribosomal (ETS and ITS) and plastid (ndhF and trnL–trnF) DNA regions, using Bayesian inference and maximum parsimony methods, strongly reject the placement of Apodocephala in the Astereae. Our results, instead, support its position as sister to the Malagasy monospecific genus Lowryanthus within the tribe Athroismeae. Morphological comparison of these sister genera reveal similarities in cypsela morphology, and the inclusion of Apodocephala in the subtribe Lowryanthinae is proposed here. The tribe Athroismeae is now represented by ten genera (Anisochaeta, Anisopappus, Apodocephala, Artemisiopsis, Athroisma, Blepharispermum, Centipeda, Leucoblepharis, Lowryanthus and Symphyllocarpus), six of which occur in Madagascar. The Malagasy Athroismeae occur in all Malagasy terrestrial ecosystems (rainforests, deciduous dry forests, thicket spiny forests and savannas) and are likely the result of multiple independent colonization events mostly from mainland Africa.
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| 10. |
- Blanco-Gavaldà, Carme, et al.
(författare)
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Repeatedly Northwards and Upwards: Southern African Grasslands Fuel the Colonization of the African Sky Islands in Helichrysum (Compositae)
- 2023
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Ingår i: Plants. ; 12:2213, s. 1-24
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Tidskriftsartikel (refereegranskat)abstract
- The Afromontane and Afroalpine areas constitute some of the main biodiversity hotspots of Africa. They are particularly rich in plant endemics, but the biogeographic origins and evolutionary processes leading to this outstanding diversity are poorly understood. We performed phylogenomic and biogeographic analyses of one of the most species-rich plant genera in these mountains, Helichrysum (Compositae-Gnaphalieae). Most previous studies have focused on Afroalpine elements of Eurasian origin, and the southern African origin of Helichrysum provides an interesting counterexample. We obtained a comprehensive nuclear dataset from 304 species ( 50% of the genus) using target-enrichment with the Compositae1061 probe set. Summary-coalescent and concatenation approaches combined with paralog recovery yielded congruent, well-resolved phylogenies. Ancestral range estimations revealed that Helichrysum originated in arid southern Africa, whereas the southern African grasslands were the source of most lineages that dispersed within and outside Africa. Colonization of the tropical Afromontane and Afroalpine areas occurred repeatedly throughout the Miocene–Pliocene. This timing coincides with mountain uplift and the onset of glacial cycles, which together may have facilitated both speciation and intermountain gene flow, contributing to the evolution of the Afroalpine flora.
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