| 1. |
- Perez-Recio, Sandra, et al.
(författare)
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Identification of Recent Tuberculosis Exposure Using QuantiFERON-TB Gold Plus, a Multicenter Study
- 2021
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Ingår i: Microbiology Spectrum. - : American Society for Microbiology. - 2165-0497. ; 9:3
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Tidskriftsartikel (refereegranskat)abstract
- We investigated whether the difference of antigen tube 2 (TB2) minus antigen tube 1 (TB1) (TB22TB1) of the QuantiFERON-TB gold plus test, which has been postulated as a surrogate for the CD81 T-cell response, could be useful in identifying recent tuberculosis (TB) exposure. We looked at the interferon gamma (IFN-g) responses and differences in TB2 and TB1 tubes for 686 adults with QFT-plus positive test results. These results were compared among groups with high (368 TB contacts), low (229 patients with immune-mediated inflammatory diseases [IMID]), and indeterminate (89 asylum seekers or people from abroad [ASPFA]) risks of recent TB exposure. A TB2-TB1 value.0.6 IU.ml(-1) was deemed to indicate a true difference between tubes. In the whole cohort, 13.6%, 10.9%, and 11.2% of cases had a TB2>TB1 result in the contact, IMID, and ASPFA groups, respectively (P = 0.591). The adjusted odds ratios (aORs) for an association between a TB2-TB1 result of >0.6 IU.ml(-1) and risk of recent exposure versus contacts were 0.71 (95% confidence interval [CI], 0.31 to 1.61) for the IMID group and 0.86 (95% CI, 0.49 to 1.52) for the ASPFA group. In TB contact subgroups, 11.4%, 15.4%, and 17.7% with close, frequent, and sporadic contact had a TB2>TB1 result (P = 0.362). The aORs versus the close subgroup were 1.29 (95% CI, 0.63 to 2.62) for the frequent subgroup and 1.55 (95% CI, 0.67 to 3.60) for the sporadic subgroup. A TB2-TB1 difference of.0.6 IU.ml(-1) was not associated with increased risk of recent TB exposure, which puts into question the clinical potential as a proxy marker for recently acquired TB infection. IMPORTANCE Contact tuberculosis tracing is essential to identify recently infected people, who therefore merit preventive treatment. However, there are no diagnostic tests that can determine whether the infection is a result of a recent exposure or not. It has been suggested that by using the QuantiFERON-TB gold plus, an interferon gamma (IFN-gamma) release assay, a difference in IFN-gamma production between the two antigen tubes (TB2 minus TB1) of.0.6 IU.ml(-1) could serve as a proxy marker for recent infection. In this large multinational study, infected individuals could not be classified according to the risk of recent exposure based on differences in IFN- g in TB1 and TB2 tubes that were higher than 0.6 IU.ml(-1). QuantiFERON-TB gold plus is not able to distinguish between recent and remotely acquired tuberculosis infection, and it should not be used for that purpose in contact tuberculosis tracing.
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| 2. |
- Maxwell, Tania L., et al.
(författare)
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Global dataset of soil organic carbon in tidal marshes
- 2023
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Ingår i: Scientific Data. - : Springer Nature. - 2052-4463. ; 10:1
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Tidskriftsartikel (refereegranskat)abstract
- Tidal marshes store large amounts of organic carbon in their soils. Field data quantifying soil organic carbon (SOC) stocks provide an important resource for researchers, natural resource managers, and policy-makers working towards the protection, restoration, and valuation of these ecosystems. We collated a global dataset of tidal marsh soil organic carbon (MarSOC) from 99 studies that includes location, soil depth, site name, dry bulk density, SOC, and/or soil organic matter (SOM). The MarSOC dataset includes 17,454 data points from 2,329 unique locations, and 29 countries. We generated a general transfer function for the conversion of SOM to SOC. Using this data we estimated a median (± median absolute deviation) value of 79.2 ± 38.1 Mg SOC ha−1 in the top 30 cm and 231 ± 134 Mg SOC ha−1 in the top 1 m of tidal marsh soils globally. This data can serve as a basis for future work, and may contribute to incorporation of tidal marsh ecosystems into climate change mitigation and adaptation strategies and policies.
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| 3. |
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| 4. |
- Bergemann, Maria, et al.
(författare)
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The Gaia-ESO Survey : Hydrogen lines in red giants directly trace stellar mass
- 2016
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Ingår i: Astronomy and Astrophysics. - : EDP Sciences. - 0004-6361 .- 1432-0746. ; 594
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Tidskriftsartikel (refereegranskat)abstract
- Red giant stars are perhaps the most important type of stars for Galactic and extra-galactic archaeology: they are luminous, occur in all stellar populations, and their surface temperatures allow precise abundance determinations for many different chemical elements. Yet, the full star formation and enrichment history of a galaxy can be traced directly only if two key observables can be determined for large stellar samples: age and chemical composition. While spectroscopy is a powerful method to analyse the detailed abundances of stars, stellar ages are the missing link in the chain, since they are not a direct observable. However, spectroscopy should be able to estimate stellar masses, which for red giants directly infer ages provided their chemical composition is known. Here we establish a new empirical relation between the shape of the hydrogen line in the observed spectra of red giants and stellar mass determined from asteroseismology. The relation allows determining stellar masses and ages with an accuracy of 10-15%. The method can be used with confidence for stars in the following range of stellar parameters: 4000 < T-eff < 5000 K, 0.5 < log g < 3.5, -2.0 < [ Fe/H] < 0.3, and luminosities log L/L-Sun < 2.5. Our analysis provides observational evidence that the H-alpha spectral characteristics of red giant stars are tightly correlated with their mass and therefore their age. We also show that the method samples well all stellar populations with ages above 1 Gyr. Targeting bright giants, the method allows obtaining simultaneous age and chemical abundance information far deeper than would be possible with asteroseismology, extending the possible survey volume to remote regions of the Milky Way and even to neighbouring galaxies such as Andromeda or the Magellanic Clouds even with current instrumentation, such as the VLT and Keck facilities.
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| 5. |
- Martin-Garcia, Sara, et al.
(författare)
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Comparing minimum number of individuals and abundance from non-invasive DNA sampling and camera trapping in the red fox (Vulpes vulpes)
- 2023
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Ingår i: Biodiversity and Conservation. - : Springer. - 0960-3115 .- 1572-9710. ; 32:6, s. 1977-1998
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Tidskriftsartikel (refereegranskat)abstract
- Applying the most appropriate sampling method is essential for estimating population size. Sampling methods and techniques to estimate abundance may be limited by environmental characteristics, species traits, specific requirements of the techniques, or the economic resources to carry out the sampling. Thus, evaluating multiple sampling methods in monitoring populations is essential for establishing effective conservation strategies. In this study, we compare two of the most commonly used sampling methods with the red fox (Vulpes vulpes) as the type species. On the one hand, we compared the minimum number of individuals (NI) detected by camera trapping, identifying individuals by morphological characteristics with the minimum number of individuals detected by DNA faeces and a set of 16 microsatellites. On the other hand, we estimated abundance by performing an N-mixture model using information from camera-traps to study the relationship between abundance and the minimum number of individuals detected. Results showed that the minimum NI provided by camera trapping was slightly higher than that of DNA faecal genotyping, with 23.66 and 19 individuals, respectively. In addition, abundance and NI detected by camera trapping showed a positive relationship. In contrast, there was a non-significant negative relationship between NI detected by faecal DNA and abundance estimates. Our results suggest using the minimum number of photo-identified individuals as a reliable index to study variation in red fox abundance when other advanced methods cannot be implemented in the study of population size. However, it is necessary to improve the methods of faecal sampling to study the relationship with camera-trap data.
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