| 1. |
- Mikryukov, Vladimir, et al.
(författare)
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Connecting the multiple dimensions of global soil fungal diversity
- 2023
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Ingår i: Science advances. - 2375-2548. ; 9:48
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Tidskriftsartikel (refereegranskat)abstract
- How the multiple facets of soil fungal diversity vary worldwide remains virtually unknown, hindering the management of this essential species-rich group. By sequencing high-resolution DNA markers in over 4000 topsoil samples from natural and human-altered ecosystems across all continents, we illustrate the distributions and drivers of different levels of taxonomic and phylogenetic diversity of fungi and their ecological groups. We show the impact of precipitation and temperature interactions on local fungal species richness (alpha diversity) across different climates. Our findings reveal how temperature drives fungal compositional turnover (beta diversity) and phylogenetic diversity, linking them with regional species richness (gamma diversity). We integrate fungi into the principles of global biodiversity distribution and present detailed maps for biodiversity conservation and modeling of global ecological processes.
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| 2. |
- Tedersoo, Leho, et al.
(författare)
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Global patterns in endemicity and vulnerability of soil fungi.
- 2022
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Ingår i: Global change biology. - : Wiley. - 1365-2486 .- 1354-1013. ; 28:22, s. 6696-6710
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Tidskriftsartikel (refereegranskat)abstract
- Fungi are highly diverse organisms, which provide multiple ecosystem services. However, compared with charismatic animals and plants, the distribution patterns and conservation needs of fungi have been little explored. Here, we examined endemicity patterns, global change vulnerability and conservation priority areas for functional groups of soil fungi based on six global surveys using a high-resolution, long-read metabarcoding approach. We found that the endemicity of all fungi and most functional groups peaks in tropical habitats, including Amazonia, Yucatan, West-Central Africa, Sri Lanka, and New Caledonia, with a negligible island effect compared with plants and animals. We also found that fungi are predominantly vulnerable to drought, heat and land-cover change, particularly in dry tropical regions with high human population density. Fungal conservation areas of highest priority include herbaceous wetlands, tropical forests, and woodlands. We stress that more attention should be focused on the conservation of fungi, especially root symbiotic arbuscular mycorrhizal and ectomycorrhizal fungi in tropical regions as well as unicellular early-diverging groups and macrofungi in general. Given the low overlap between the endemicity of fungi and macroorganisms, but high conservation needs in both groups, detailed analyses on distribution and conservation requirements are warranted for other microorganisms and soil organisms.
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| 3. |
- Hoppenreijs, Jacqueline, et al.
(författare)
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Three major steps toward the conservation of freshwater and riparian biodiversity
- 2024
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Ingår i: Conservation Biology. - : John Wiley & Sons. - 0888-8892 .- 1523-1739. ; 38:3
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Tidskriftsartikel (refereegranskat)abstract
- Freshwater ecosystems and their bordering wetlands and riparian zones are vital for human society and biological diversity. Yet, they are among the most degraded ecosystems, where sharp declines in biodiversity are driven by human activities, such as hydropower development, agriculture, forestry, and fisheries. Because freshwater ecosystems are characterized by strongly reciprocal linkages with surrounding landscapes, human activities that encroach on or degrade riparian zones ultimately lead to declines in freshwater–riparian ecosystem functioning. We synthesized results of a symposium on freshwater, riparian, and wetland processes and interactions and analyzed some of the major problems associated with improving freshwater and riparian research and management. Three distinct barriers are the lack of involvement of local people in conservation research and management, absence of adequate measurement of biodiversity in freshwater and riparian ecosystems, and separate legislation and policy on riparian and freshwater management. Based on our findings, we argue that freshwater and riparian research and conservation efforts should be integrated more explicitly. Best practices for overcoming the 3 major barriers to improved conservation include more and sustainable use of traditional and other forms of local ecological knowledge, choosing appropriate metrics for ecological research and monitoring of restoration efforts, and mirroring the close links between riparian and freshwater ecosystems in legislation and policy. Integrating these 3 angles in conservation science and practice will provide substantial benefits in addressing the freshwater biodiversity crisis.
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| 4. |
- Hämäläinen, Aino, et al.
(författare)
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Living Trees and Biodiversity
- 2023
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Ingår i: Boreal Forests in the Face of Climate Change : Sustainable Management. - Cham : Springer International Publishing. - 9783031159879 ; :74, s. 145-166
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Bokkapitel (refereegranskat)abstract
- Living trees are fundamental for boreal forest biodiversity. They contribute to stand structural diversity, which determines the range of habitat niches available for forest-dwelling species. Specific characteristics of living trees, such as species, age, and presence of microhabitats, determine how species utilize trees for food, as nesting places, or as growing substrates. This chapter explores the associations between living trees and aboveground biodiversity, reviews the factors such as soil productivity, hydrological regime, stand successional stage, and forestry activities that influence the characteristics of living trees and stand structural diversity, and presents the consequences of current and future climate change on boreal biodiversity.
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| 5. |
- Ovaskainen, Otso, et al.
(författare)
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Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA
- 2024
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Ingår i: Scientific Data. - 2052-4463. ; 11
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Tidskriftsartikel (refereegranskat)abstract
- Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.
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| 6. |
- Runnel, Kadri, et al.
(författare)
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Do different growth rates of trees cause distinct habitat qualities for saproxylic assemblages?
- 2021
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Ingår i: Oecologia. - : Springer Science and Business Media LLC. - 0029-8549 .- 1432-1939. ; 51, s. 1472-1485
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Tidskriftsartikel (refereegranskat)abstract
- In production forests, a common silvicultural objective is enhancing tree growth rates. The growth rate influences both mechanical and biochemical properties of wood, which may have an impact on dead wood inhabiting (i.e. saproxylic) species. In this study, we tested for the first time whether tree growth rates affect dead-wood associated assemblages in general and the occurrence of red-listed species in particular. We sampled saproxylic beetles (eclector traps) and fungi (DNA metabarcoding of wood samples) in dead trunks of Norway spruce (Picea abies), which had different growth rates within the same hemiboreal forests in Sweden. A high proportion of fungi showed a positive association to increasing tree growth. This resulted in higher fungal richness in fast-grown trees both at the trunk scale and across multiple studied trunks. Such patterns were not observed for saproxylic beetles. However, a set of species (both beetles and fungi) preferred slow-grown wood. Moreover, the total number of red-listed species was highest in slow-grown trunks. We conclude that dead wood from slow-grown trees hosts relatively fewer saproxylic species, but a part of these may be vulnerable to production forestry. It implies that slow-grown trees should be a target in nature conservation. However, where slow-grown trees are absent, for instance in forests managed for a high biomass production, increasing the volumes of dead wood from fast-grown trees may support many species.
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| 7. |
- Runnel, Kadri
(författare)
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Habitat Models of Focal Species Can Link Ecology and Decision-Making in Sustainable Forest Management
- 2020
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Ingår i: Forests. - : MDPI AG. - 1999-4907. ; 11
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Forskningsöversikt (refereegranskat)abstract
- A fundamental problem of sustainability is how to reduce the double complexity of ecological and social systems into simple operational terms. We highlight that the conservation concept of focal species (selected species sensitive to a set of anthropogenic threats to their habitat) links multiple issues of ecological sustainability, and their habitat models can provide a practical tool for solving these issues. A review of the literature shows that most spatial modeling of focal species focuses on vertebrates, lacks the aspect of aquatic and soil habitats, and has been slow in the uptake by actual management planning. We elaborate on a deductive modeling approach that first generalizes the main influential dimensions of habitat change (threats), which are then parameterized as habitat quality estimates for focal species. If built on theoretical understanding and properly scaled, the maps produced with such models can cost-effectively describe the dynamics of ecological qualities across forest landscapes, help set conservation priorities, and reflect on management plans and practices. The models also serve as ecological hypotheses on biodiversity and landscape function. We illustrate this approach based on recent additions to the forest reserve network in Estonia, which addressed the insufficient protection of productive forest types. For this purpose, mostly former production forests that may require restoration were set aside. We distinguished seven major habitat dimensions and their representative taxa in these forests and depicted each dimension as a practical stand-scale decision tree of habitat quality. The model outcomes implied that popular stand-structural targets of active forest restoration would recover passively in reasonable time in these areas, while a critically degraded condition (loss of old trees of characteristic species) required management beyond reserve borders. Another hidden issue revealed was that only a few stands of consistently low habitat quality concentrated in the landscape to allow cost-efficient restoration planning. We conclude that useful habitat models for sustainable forest management have to balance single-species realism with stakeholder expectations of meaningful targets and scales. Addressing such social aspects through the focal species concept could accelerate the adoption of biodiversity distribution modeling in forestry.
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| 8. |
- Runnel, Kadri
(författare)
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Restoration dilemmas between future ecosystem and current species values: The concept and a practical approach in Estonian mires
- 2019
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Ingår i: Journal of Environmental Management. - : Elsevier BV. - 0301-4797 .- 1095-8630. ; 250
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Forskningsöversikt (refereegranskat)abstract
- Ecosystem restoration is gaining political and economic support worldwide, but its exact targets and costs often remain unclear. A key issue, both for predicting restoration success and assessing the costs, is the uncertainty of post-restoration development of the ecosystem. A specific combination of uncertainties emerges when ecosystem restoration would negatively affect pre-restoration species conservation values. Such dilemma appears to be common, but largely ignored in restoration planning; for example, in historically degraded forests, wetlands and grasslands that provide novel habitats for some threatened species. We present a framework of linked options for resolving the dilemma, and exemplify its application in extensive mire restoration in Estonia. The broad options include: redistributing the risks by timing; relocating restoration sites; modifying restoration techniques; and managing for future habitats of the species involved. In Estonia, we assessed these options based on spatially explicit mapping of expected future states of the ecosystem, their uncertainty, and the distribution of species at risk. Such planning documentation, combined with follow-up monitoring and experimentation, can be used for adaptive management, by funding organizations and for academic research.
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