| 1. |
- Capek, Petr, et al.
(författare)
-
Drivers of phosphorus limitation across soil microbial communities
- 2016
-
Ingår i: Functional Ecology. - : Wiley. - 0269-8463 .- 1365-2435. ; 30:10, s. 1705-1713
-
Tidskriftsartikel (refereegranskat)abstract
- Nutrient limitation of soil microbial communities controls the rates of plant litter and soil organic matter decomposition and nutrient mineralization, and as such, it is central to soil and ecosystem models. According to ecological stoichiometry theory, when the carbon (C)-to-nutrient (E) ratio of resources used by a microbial community is higher than a critical ratio (C:E-CR), that nutrient is limiting. The C-to-phosphorus (P) critical ratio (C:P-CR) that determines P limitation is largely unknown for soils, and thus, it is the subject of our study. Our results show that the C:P-CR in widely different soils ranges from 266 to 4651 or from 209 to 7407 when accounting for 95% confidence intervals. Using constant or narrowly fluctuating C:P-CR in ecosystem models is therefore inaccurate. The C:P-CR cannot be simply predicted from microbial community C:P or available soil P. C:P-CR was only related to relative abundance of phospholipid fatty acids, which reflects microbial community structure and physiology. Our data suggest complex controls over microbial community C:P-CR. We further propose that using P storage compounds that allow the microbial community to temporarily buffer variability in available P can represent a widely adopted strategies across soils.
|
|
| 2. |
|
|
| 3. |
- Choma, Michal, et al.
(författare)
-
Recovery of the ectomycorrhizal community after termination of long-term nitrogen fertilisation of a boreal Norway spruce forest
- 2017
-
Ingår i: Fungal Ecology. - : Elsevier BV. - 1754-5048 .- 1878-0083. ; 29, s. 116-122
-
Tidskriftsartikel (refereegranskat)abstract
- © 2016 Elsevier Ltd and British Mycological Society.Ectomycorrhizal fungi (ECM) are a fundamental component of boreal forests promoting tree growth and participating in soil nutrient cycling. Increased nitrogen (N) input is known to largely influence ECM communities but their potential recovery is not well understood. Therefore, we studied the effects of long-term N-fertilisation on ECM communities, and their recovery after termination of N treatment. Fungal ITS sequencing data indicated that N-fertilisation (34 kg N ha-1 y-1) for 46 y decreased the relative abundance of ECM species in the fungal community and suppressed originally dominating medium-distance fringe exploration types adapted to N-limited conditions, while the ECM diversity remained unaffected. In other plots, 23 y after termination of fertilisation at 73 kg N ha-1 y-1 for 23 y, the relative abundance of ECM species shifted closer to, but did not reach, control levels. These observations indicate only slow recovery of ECM community, likely due to a high soil N retention capacity.
|
|
| 4. |
- Dao, Thao Thi, et al.
(författare)
-
Lignin Preservation and Microbial Carbohydrate Metabolism in Permafrost Soils
- 2022
-
Ingår i: Journal of Geophysical Research - Biogeosciences. - 2169-8953 .- 2169-8961. ; 127:1
-
Tidskriftsartikel (refereegranskat)abstract
- Permafrost-affected soils in the northern circumpolar region store more than 1,000 Pg soil organic carbon (OC), and are strongly vulnerable to climatic warming. However, the extent to which changing soil environmental conditions with permafrost thaw affects different compounds of soil organic matter (OM) is poorly understood. Here, we assessed the fate of lignin and non-cellulosic carbohydrates in density fractionated soils (light fraction, LF vs. heavy fraction, HF) from three permafrost regions with decreasing continentality, expanding from east to west of northern Siberia (Cherskiy, Logata, Tazovskiy, respectively). In soils at the Tazovskiy site with thicker active layers, the LF showed smaller OC-normalized contents of lignin-derived phenols and plant-derived sugars and a decrease of these compounds with soil depth, while a constant or even increasing trend was observed in soils with shallower active layers (Cherskiy and Logata). Also in the HF, soils at the Tazovskiy site had smaller contents of OC-normalized lignin-derived phenols and plant-derived sugars along with more pronounced indicators of oxidative lignin decomposition and production of microbial-derived sugars. Active layer deepening, thus, likely favors the decomposition of lignin and plant-derived sugars, that is, lignocelluloses, by increasing water drainage and aeration. Our study suggests that climate-induced degradation of permafrost soils may promote carbon losses from lignin and associated polysaccharides by abolishing context-specific preservation mechanisms. However, relations of OC-based lignin-derived phenols and sugars in the HF with mineralogical properties suggest that future OM transformation and carbon losses will be modulated in addition by reactive soil minerals.
|
|
| 5. |
- Gentsch, Norman, et al.
(författare)
-
Temperature response of permafrost soil carbon is attenuated by mineral protection
- 2018
-
Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 24:8, s. 3401-3415
-
Tidskriftsartikel (refereegranskat)abstract
- Climate change in Arctic ecosystems fosters permafrost thaw and makes massive amounts of ancient soil organic carbon (OC) available to microbial breakdown. However, fractions of the organic matter (OM) may be protected from rapid decomposition by their association with minerals. Little is known about the effects of mineral-organic associations (MOA) on the microbial accessibility of OM in permafrost soils and it is not clear which factors control its temperature sensitivity. In order to investigate if and how permafrost soil OC turnover is affected by mineral controls, the heavy fraction (HF) representing mostly MOA was obtained by density fractionation from 27 permafrost soil profiles of the Siberian Arctic. In parallel laboratory incubations, the unfractionated soils (bulk) and their HF were comparatively incubated for 175 days at 5 and 15 degrees C. The HF was equivalent to 70 +/- 9% of the bulk CO2 respiration as compared to a share of 63 +/- 1% of bulk OC that was stored in the HF. Significant reduction of OC mineralization was found in all treatments with increasing OC content of the HF (HF-OC), clay-size minerals and Fe or Al oxyhydroxides. Temperature sensitivity (Q10) decreased with increasing soil depth from 2.4 to 1.4 in the bulk soil and from 2.9 to 1.5 in the HF. A concurrent increase in the metal-to-HF-OC ratios with soil depth suggests a stronger bonding of OM to minerals in the subsoil. There, the younger C-14 signature in CO2 than that of the OC indicates a preferential decomposition of the more recent OM and the existence of a MOA fraction with limited access of OM to decomposers. These results indicate strong mineral controls on the decomposability of OM after permafrost thaw and on its temperature sensitivity. Thus, we here provide evidence that OM temperature sensitivity can be attenuated by MOA in permafrost soils.
|
|
| 6. |
- Kuhry, Peter, et al.
(författare)
-
Lability classification of soil organic matter in the northern permafrost region
- 2020
-
Ingår i: Biogeosciences. - : Copernicus GmbH. - 1726-4170 .- 1726-4189. ; 17:2, s. 361-379
-
Tidskriftsartikel (refereegranskat)abstract
- The large stocks of soil organic carbon (SOC) in soils and deposits of the northern permafrost region are sensitive to global warming and permafrost thawing. The potential release of this carbon (C) as greenhouse gases to the atmosphere does not only depend on the total quantity of soil organic matter (SOM) affected by warming and thawing, but it also depends on its lability (i.e., the rate at which it will decay). In this study we develop a simple and robust classification scheme of SOM lability for the main types of soils and deposits in the northern permafrost region. The classification is based on widely available soil geochemical parameters and landscape unit classes, which makes it useful for upscaling to the entire northern permafrost region. We have analyzed the relationship between C content and C-CO2 production rates of soil samples in two different types of laboratory incubation experiments. In one experiment, ca. 240 soil samples from four study areas were incubated using the same protocol (at 5 degrees C, aerobically) over a period of 1 year. Here we present C release rates measured on day 343 of incubation. These long-term results are compared to those obtained from short-term incubations of ca. 1000 samples (at 12 degrees C, aerobically) from an additional three study areas. In these experiments, C-CO2 production rates were measured over the first 4 d of incubation. We have focused our analyses on the relationship between C-CO2 production per gram dry weight per day (mu gC-CO2 gdw(-1) d(-1)) and C content (%C of dry weight) in the samples, but we show that relationships are consistent when using C = N ratios or different production units such as mu gC per gram soil C per day (mu gC-CO2 gC(-1) d(-1)) or per cm(3) of soil per day (mu gC-CO2 cm(-3) d(-1)). C content of the samples is positively correlated to C-CO2 production rates but explains less than 50% of the observed variability when the full datasets are considered. A partitioning of the data into landscape units greatly reduces variance and provides consistent results between incubation experiments. These results indicate that relative SOM lability decreases in the order of Late Holocene eolian deposits to alluvial deposits and mineral soils (including peaty wetlands) to Pleistocene yedoma deposits to C-enriched pockets in cryoturbated soils to peat deposits. Thus, three of the most important SOC storage classes in the northern permafrost region (yedoma, cryoturbated soils and peatlands) show low relative SOM lability. Previous research has suggested that SOM in these pools is relatively undecomposed, and the reasons for the observed low rates of decomposition in our experiments need urgent attention if we want to better constrain the magnitude of the thawing permafrost carbon feedback on global warming.
|
|
| 7. |
- Manzoni, Stefano, et al.
(författare)
-
Optimal metabolic regulation along resource stoichiometry gradients
- 2017
-
Ingår i: Ecology Letters. - : Wiley. - 1461-023X .- 1461-0248. ; 20, s. 1182-1191
-
Tidskriftsartikel (refereegranskat)abstract
- Most heterotrophic organisms feed on substrates that are poor in nutrients compared to their demand, leading to elemental imbalances that may constrain their growth and function. Flexible carbon (C)-use efficiency (CUE, C used for growth over C taken up) can represent a strategy to reduce elemental imbalances. Here, we argue that metabolic regulation has evolved to maximise the organism growth rate along gradients of nutrient availability and translated this assumption into an optimality model that links CUE to substrate and organism stoichiometry. The optimal CUE is predicted to decrease with increasing substrate C-to-nutrient ratio, and increase with nutrient amendment. These predictions are generally confirmed by empirical evidence from a new database of c. 2200 CUE estimates, lending support to the hypothesis that CUE is optimised across levels of organisation (microorganisms and animals), in aquatic and terrestrial systems, and when considering nitrogen or phosphorus as limiting nutrients.
|
|
| 8. |
- Manzoni, Stefano, et al.
(författare)
-
Reviews and syntheses : Carbon use efficiency from organisms to ecosystems - definitions, theories, and empirical evidence
- 2018
-
Ingår i: Biogeosciences. - : COPERNICUS GESELLSCHAFT MBH. - 1726-4170 .- 1726-4189. ; 15:19, s. 5929-5949
-
Forskningsöversikt (refereegranskat)abstract
- The cycling of carbon (C) between the Earth surface and the atmosphere is controlled by biological and abiotic processes that regulate C storage in biogeochemical compartments and release to the atmosphere. This partitioning is quantified using various forms of C-use efficiency (CUE) - the ratio of C remaining in a system to C entering that system. Biological CUE is the fraction of C taken up allocated to biosynthesis. In soils and sediments, C storage depends also on abiotic processes, so the term C-storage efficiency (CSE) can be used. Here we first review and reconcile CUE and CSE definitions proposed for autotrophic and heterotrophic organisms and communities, food webs, whole ecosystems and watersheds, and soils and sediments using a common mathematical framework. Second, we identify general CUE patterns; for example, the actual CUE increases with improving growth conditions, and apparent CUE decreases with increasing turnover. We then synthesize > 5000CUE estimates showing that CUE decreases with increasing biological and ecological organization - from uni-cellular to multicellular organisms and from individuals to ecosystems. We conclude that CUE is an emergent property of coupled biological-abiotic systems, and it should be regarded as a flexible and scale-dependent index of the capacity of a given system to effectively retain C.
|
|
| 9. |
- Rappe George, Martin, et al.
(författare)
-
Indications that long-term nitrogen loading limits carbon resources for soil microbes
- 2017
-
Ingår i: Soil Biology and Biochemistry. - : Elsevier BV. - 0038-0717 .- 1879-3428. ; 115, s. 310-321
-
Tidskriftsartikel (refereegranskat)abstract
- Microbial communities in the organic horizon (O-horizon) of forest soils play key roles in terrestrial nitrogen (N) cycling, but effects on them of long-term high N loading, by N deposition or experimental addition, are not fully understood. Thus, we investigated N-loading effects on soil microbial biomass N, carbon (C) and phosphorus stoichiometry, hydrolytic and oxidative enzymes, community composition (via phospholipid fatty acids, PLFA) and soil chemistry of the O-horizon in study plots of three well-studied experimental Norway spruce (Picea abies) forests in Sweden and the Czech Republic. These forests span substantial gradients in current N deposition, experimental N addition and nitrate (NO3 −) leaching. Current N deposition ranges from ∼3 kg ha−1 year−1 of N in central Sweden (Stråsan) to ∼15 kg ha−1 year−1 of N in SW Sweden (Skogaby) and Czech Republic (Čertovo). Furthermore, accumulated historical N loading during 1950–2000 (which include experimental N addition performed at Stråsan and Skogaby) ranged ∼200–∼2000 kg ha−1 of N. Across all sites and treatments, current NO3 − leaching ranged from low (∼0.1 kg ha−1 year−1 of N) at Stråsan, to high (∼15 kg ha−1 year−1 of N) at Skogaby and Čertovo. We found significantly lower C/N ratios and greater amounts of extractable inorganic N species in the forest soils’ O-horizons at the high N loading plots. Microbial biomass and basal respiration decreased under experimental N addition treatments and tended to decrease with increased N deposition. Similarly, activities of hydrolytic enzyme activity associated with N acquisition were lower, although differences in activities at specific sites with the highest and intermediate historical N deposition levels failed statistical significance. Conversely, activities of soil hydrolytic enzymes associated with C acquisition were greater in study plots exposed high N loading. PLFA profiles indicated shifts in microbial community composition induced by long-term N load, towards higher and lower relative abundance of Gram-positive and Gram-negative bacteria, respectively (but no changes in fungal relative abundance). Taken together, our results suggest that long-term N loading of N-limited Norway spruce forests aggravates limitation of other resources, likely of C, for soil microbial communities. Although microbial variables in the soil O-horizon differed between plots exposed to low and high current N loading, microbial variables in plots that leached small amounts and large amounts of NO3 − exposed to high N load were similar. © 2017
|
|
| 10. |
- Santruckova, Hana, et al.
(författare)
-
Discerning environmental factors affecting current tree growth in Central Europe
- 2016
-
Ingår i: Science of the Total Environment. - : Elsevier BV. - 0048-9697. ; 573, s. 541-554
-
Tidskriftsartikel (refereegranskat)abstract
- We examined the effect of individual environmental factors on the current spruce tree growth assessed from a repeated country-level statistical landscape (incl. forest) survey in the Czech Republic An extensive set of variables related to tree size, competition, site characteristics including soil texture, chemistry, N deposition and climate was tested within a random-effect model to explain growth in the conditions of dominantly managed forest ecosystems. The current spruce basal area increment was assessed from two consecutive landscape surveys conducted in 2008/2009 and six years later in 2014/2015. Tree size, age and competition within forest stands were found to be the dominant explanatory variables, whereas the expression of site characteristics, environmental and climatic drives was weaker. The significant site variables affecting growth included soil C/N ratio and soil exchangeable acidity (pH KCI; positive response) reflecting soil chemistry, long-term N-deposition (averaged since 1975) in combination with soil texture (clay content) and Standardized Precipitation Index (SPI), a drought index expressing moisture conditions. Sensitivity of growth to N-deposition was positive, although weak. SPI was positively related to and significant in explaining tree growth when expressed for the growth season. Except SPI, no significant relation of growth was determined to altitude-related variables (temperature, growth season length). We identified the current spruce growth optimum at elevations about 800 m a.s.l. or higher in the conditions of the country. This suggests that at lower elevations, limitation by a more pronounced water deficit dominates, whereas direct temperature limitation may concern the less frequent higher elevations. The mixed linear model of spruce tree growth explained 55 and 65% of the variability with fixed and random effects included, respectively, and provided new insights on the current spruce tree growth and factors affecting it within the environmental gradients of the country. (C) 2016 Elsevier B.V. All rights reserved.
|
|
