| 1. |
- Angelstam, Per, et al.
(author)
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Evidence-Based Knowledge Versus Negotiated Indicators for Assessment of Ecological Sustainability : The Swedish Forest Stewardship Council Standard as a Case Study
- 2013
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In: Ambio. - : Springer Science and Business Media LLC. - 0044-7447 .- 1654-7209. ; 42:2, s. 229-240
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Journal article (peer-reviewed)abstract
- Assessing ecological sustainability involves monitoring of indicators and comparison of their states with performance targets that are deemed sustainable. First, a normative model was developed centered on evidence-based knowledge about (a) forest composition, structure, and function at multiple scales, and (b) performance targets derived by quantifying the habitat amount in naturally dynamic forests, and as required for presence of populations of specialized focal species. Second, we compared the Forest Stewardship Council (FSC) certification standards' ecological indicators from 1998 and 2010 in Sweden to the normative model using a Specific, Measurable, Accurate, Realistic, and Timebound (SMART) indicator approach. Indicator variables and targets for riparian and aquatic ecosystems were clearly under-represented compared to terrestrial ones. FSC's ecological indicators expanded over time from composition and structure towards function, and from finer to coarser spatial scales. However, SMART indicators were few. Moreover, they poorly reflected quantitative evidence-based knowledge, a consequence of the fact that forest certification mirrors the outcome of a complex social negotiation process.
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| 2. |
- Barredo, José I., et al.
(author)
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Mapping and assessment of forest ecosystems and their services : Applications and guidance for decision making in the framework of MAES
- 2015
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Reports (other academic/artistic)abstract
- The aim of this report is to illustrate by means of a series of case studies the implementation of mapping and assessment of forest ecosystem services in different contexts and geographical levels. Methodological aspects, data issues, approaches, limitations, gaps and further steps for improvement are analysed for providing good practices and decision making guidance. The EU initiative on Mappingand Assessment of Ecosystems and their Services (MAES), with the support of all Member States, contributes to improve the knowledge on ecosystem services. MAES is one of the building-block initiatives supporting the EU Biodiversity Strategy to 2020.
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| 3. |
- Belinchon, Rocio, et al.
(author)
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Local epiphyte establishment and future metapopulation dynamics in landscapes with different spatiotemporal properties
- 2017
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In: Ecology. - : Wiley. - 0012-9658 .- 1939-9170. ; 98, s. 741-750
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Journal article (peer-reviewed)abstract
- Understanding the relative importance of different ecological processes on the metapopulation dynamics of species is the basis for accurately forecasting metapopulation size in fragmented landscapes. Successful local colonization depends on both species dispersal range and how local habitat conditions affect establishment success. Moreover, there is limited understanding of the effects of different spatiotemporal landscape properties on future metapopulation size. We investigate which factors drive the future metapopulation size of the epiphytic model lichen species Lobaria pulmonaria in a managed forest landscape. First, we test the importance of dispersal and local conditions on the colonization-extinction dynamics of the species using Bayesian state-space modelling of a large-scale data set collected over a 10-yr period. Second, we test the importance of dispersal and establishment limitation in explaining establishment probability and subsequent local population growth, based on a 10-yr propagule sowing experiment. Third, we test how future metapopulation size is affected by different metapopulation and spatiotemporal landscape dynamics, using simulations with the metapopulation models fitted to the empirical data. The colonization probability increased with tree inclination and connectivity, with a mean dispersal distance of 97 m (95% credible intervals, 5-530 m). Local extinctions were mainly deterministic set by tree mortality, but also by tree cutting by forestry. No experimental establishments took place on clearcuts, and in closed forest the establishment probability was higher on trees growing on moist than on dry-mesic soils. The subsequent local population growth rate increased with increasing bark roughness. The simulations showed that the restricted dispersal range estimated (compared to non-restricted dispersal range), and short tree rotation length (65 yr instead of 120) had approximately the same negative effects on future metapopulation size, while regeneration of trees creating a random tree pattern instead of an aggregated one had only some negative effect. However, using the colonization rate obtained with the experimentally added diaspores led to a considerable increase in metapopulation size, making the dispersal limitation of the species clear. The future metapopulation size is thus set by the number of host trees located in shady conditions, not isolated from occupied trees, and by the rotation length of these host trees.
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| 4. |
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| 5. |
- Björkman, Christer, et al.
(author)
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Spatial distribution of interacting insect predators: Possible roles of intraguild predation and the surrounding habitat
- 2011
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In: Basic and Applied Ecology. - : Elsevier BV. - 1439-1791 .- 1618-0089. ; 12, s. 516-522
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Journal article (peer-reviewed)abstract
- Predator foraging behaviour affects the outcome of enemy enemy interactions. Using a combination of fieldwork and laboratory experiments, we show that intraguild predation may be important in the field distribution of generalist predators that share a common prey: the eggs (and larvae) of the leaf beetle Phratora vulgatissima, a major insect pest in coppicing willow plantations. We focused on a species from the hoverfly genus Parasyrphus (Syrphidae), which may exhibit large temporal and spatial variation in density. Predator and prey densities were quantified in 40 field plots in willow plantations. The likelihood of finding hoverfly eggs declined with increasing densities of two predatory minds, Orthotylus marginalis and Closterotomus fulvomaculatus, which exhibit less mobile behaviour similar to that of hoverfly larvae. The density of a more mobile predatory bug species, the anthocorid Anthocoris nemorum, was not associated with hoverfly occurrence. These results corroborate the hypothesis that less mobile predators should be stronger intraguild predators than mobilepredators. Further partial support for this hypothesis was obtained in the laboratory study where individual predators were presented with clutches of P vulgatissima eggs containing one hoverfly egg: the less mobile C. fulvomaculattts and O. marginalis tended to consume the hoverfly egg more readily than the more mobile A. nemorum. However, most individuals of all three bug species consumed the egg of the potential competitor - the syrphid - within 24 h. The field study also showed that hoverfly occurrence was positively associated with the density of their prey and with the presence of nearby forests. We conclude that intraguild predation, abundance of prey and the surrounding habitat affect the distribution of hoverflies in this system and should be considered when developing biological control methods.
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| 6. |
- Bradter, Ute, et al.
(author)
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Can opportunistically collected Citizen Science data fill a data gap for habitat suitability models of less common species?
- 2018
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In: Methods in Ecology and Evolution. - 2041-210X. ; 9, s. 1667-1678
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Journal article (peer-reviewed)abstract
- 1. Opportunistically collected species observations contributed by volunteer reporters are increasingly available for species and regions for which systematically collected data are not available. However, it is unclear if they are suitable to produce reliable habitat suitability models (HSMs), and hence if the species-habitat relationships found and habitat suitability maps produced can be used with confidence to advice conservation management and address basic and applied research questions.2. We evaluated HSMs with opportunistically collected observations against HSMs with systematically collected observations. We enhanced the opportunistically collected presence-only data by adding inferred species absences. To obtain inferred absences, we asked individual reporters about their identification skills and if they reported certain species consistently and combined this information with their observations. We evaluated several HSM methods using a forest bird species, Siberian jay (Perisoreus infaustus), in Sweden: logistic regression with inferred absences, two versions of MaxEnt, a model combining presence-absence with presence-only observations and a Bayesian site-occupancy-detection model.3. All HSM methods produced nationwide habitat suitability maps of Siberian jay that agreed well with systematically collected observations (AUC: 086-0.88) and were very similar to a habitat suitability map produced from the HSM with systematically collected observations (Spearman rho: 0.94-0.98). At finer geographical scales there were differences among methods.4. At finer scale, the resulting habitat suitability maps from logistic regression with inferred absences agreed better with results from systematically collected observations than other methods. The species-habitat relationships found with logistic regression also agreed well with those found from systematically collected data and with prior expectations based on the species ecology.5. Synthesis and application. For many regions and species, systematically collected data are not available. By using inferred absences from high-quality, opportunistically collected contributions of few very active reporters in logistic regression we obtained HSMs that produced results similar to those from a systematic survey. Adding high-quality inferred absences to opportunistically collected data is likely possible for many less common species across various organism groups. Well-performing HSMs are important to facilitate applications such as spatial conservation planning and prioritization, monitoring of invasive species, understanding species habitat requirements or climate change studies.
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| 7. |
- Bradter, Ute, et al.
(author)
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Habitat suitability models based on opportunistic citizen science data: Evaluating forecasts from alternative methods versus an individual-based model
- 2021
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In: Diversity and Distributions. - : Wiley. - 1366-9516 .- 1472-4642. ; 27, s. 2397-2411
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Journal article (peer-reviewed)abstract
- Aim To evaluate the utility of opportunistic data from citizen science programmes for forecasting species distributions against forecasts with a model of individual-based population dynamics. Location Sweden. Methods We evaluated whether alternative methods for building habitat suitability models (HSMs) based on opportunistic data from citizen science programmes produced forecasts that were consistent with forecasts from two benchmark models: (1) a HSM based on data from systematic monitoring and (2) an individual-based model for spatially explicit population dynamics based on empirical demographic and movement data. We forecasted population numbers and habitat suitability for three realistic, future forest landscapes for a forest bird, the Siberian jay (Perisoreus infaustus). We ranked simulated forest landscapes with respect to their benefits to Siberian jays for each modelling method and compared the agreement of the rankings among methods. Results Forecasts based on our two benchmark models were consistent with each other and with expectations based on the species' ecology. Forecasts from logistic regression models based on opportunistic data were consistent with the benchmark models if species detections were combined with high-quality inferred absences derived via retrospective interviews with experienced "super-reporters." In contrast, forecasts with three other widely used methods were inconsistent with the benchmark models, sometimes with misleading rankings of future scenarios. Main conclusions Our critical evaluation of alternative HSMs against a spatially explicit IBM demonstrates that information on species absences critically improves forecasts of species distributions using opportunistic data from citizen science programmes. Moreover, high-quality information on species absences can be retrospectively inferred from surveys of the consistency of reporting of individual species and the identification skills of participating reporters. We recommend that citizen science projects incorporate procedures to evaluate reporting behaviour. Inferred absences may be especially useful for improving forecasts for species and regions poorly covered by systematic monitoring schemes.
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| 8. |
- Caruso, Alexandro, et al.
(author)
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Colonization-extinction dynamics of epixylic lichens along a decay gradient in a dynamic landscape
- 2010
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In: Oikos. - : Wiley. - 0030-1299 .- 1600-0706. ; 119, s. 1947-1953
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Journal article (peer-reviewed)abstract
- Metapopulation models are often used for understanding and predicting species dynamics in fragmented landscapes. Several models have been proposed depending on e.g. the relative importance of patch dynamics on the metapopulation dynamics. Dead wood is a dynamic substrate patch, and species that are confined to such patches have experienced a high degree of habitat loss in managed forests. Little is, however, known about how the population dynamics of epixylic species are affected by the fast dynamics of their substrate patches. We quantified the effect of local patch conditions and metapopulation processes on colonizations and extinctions of epixylic lichen species in a managed boreal forest landscape. This was done by twice surveying seven lichen metapopulations on 293 stumps in 30 stands of ages covering the duration of the dynamic patches (stumps). We also investigated the relative importance of local stochastic extinctions from stumps that remained available, and deterministic extinctions due to stump surface disappearance. We found importance of a decay gradient, surrounding metapopulation size, and local population sizes, in driving the colonization-extinction dynamics of epixylic lichens. The species were sorted along the stump decay gradient. Increasing surrounding metapopulation size was associated with increased colonization rates, and increasing local population size decreased lichen extinction rates. Finally, both local stochastic extinctions and deterministic extinctions due to patch disappearance occur, confirming that the long-term persistence of epixylic lichens depends on colonization rates that compensate for stochastic population extinctions as well as deterministic extinctions.
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| 9. |
- Chi, Celestine N., et al.
(author)
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Reassessing a sparse energetic network within a single protein domain
- 2008
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In: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 0027-8424 .- 1091-6490. ; 105:12, s. 4679-4684
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Journal article (peer-reviewed)abstract
- Understanding the molecular principles that govern allosteric communication is an important goal in protein science. One way allostery could be transmitted is via sparse energetic networks of residues, and one such evolutionary conserved network was identified in the PDZ domain family of proteins by multiple sequence alignment [Lockless SW, Ranganathan R (1999) Science 286:295-299]. We have reassessed the energetic coupling of these residues by double mutant cycles together with ligand binding and stability experiments and found that coupling is not a special property of the coevolved network of residues in PDZ domains. The observed coupling for ligand binding is better explained by a distance relationship, where residues close in space are more likely to couple than distal residues. Our study demonstrates that statistical coupling from sequence analysis is not necessarily a reporter of energetic coupling and allostery.
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| 10. |
- Dahlberg, Anders, et al.
(author)
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Ten principles for conservation translocations of threatened wood-inhabiting fungi
- 2020
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In: Fungal Ecology. - 1754-5048 .- 1878-0083. ; 44
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Journal article (peer-reviewed)abstract
- Unlike for many other organism groups, conservation translocations of fungi are still rare. Encouraged by recent successful translocations, there is a growing interest in applying this conservation tool to threatened wood-inhabiting fungi. When combined with other conservation or restoration measures, translocation can be an effective measure for preventing further population decline in the short term, and species extinctions in the long term. Translocations can be appropriate for rare and specialist fungal species that occur as small local populations in isolated patches across fragmented landscapes, where there is a low likelihood of successful dispersal between distant host trees that have special qualities and are situated in suitable conditions. As species translocations are a controversial topic, the pros and cons of translocation as a conservation tool for threatened fungi need careful consideration. We highlight the uncertainties and risks that are connected to fungal translocations, and propose ten principles adhering to the precautionary principle. (C) 2020 Elsevier Ltd and British Mycological Society. All rights reserved.
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