| 1. |
- Zamioudis, Christos, et al.
(författare)
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Rhizobacterial volatiles and photosynthesis-related signals coordinate MYB72 expression in Arabidopsis roots during onset of induced systemic resistance and iron-deficiency responses
- 2015
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Ingår i: The Plant Journal. - : Wiley. - 0960-7412 .- 1365-313X. ; 84:2, s. 309-322
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Tidskriftsartikel (refereegranskat)abstract
- In Arabidopsis roots, the transcription factor MYB72 plays a dual role in the onset of rhizobacteria-induced systemic resistance (ISR) and plant survival under conditions of limited iron availability. Previously, it was shown that MYB72 coordinates the expression of a gene module that promotes synthesis and excretion of iron-mobilizing phenolic compounds in the rhizosphere, a process that is involved in both iron acquisition and ISR signaling. Here, we show that volatile organic compounds (VOCs) from ISR-inducing Pseudomonas bacteria are important elicitors of MYB72. In response to VOC treatment, MYB72 is co-expressed with the iron uptake-related genes FERRIC REDUCTION OXIDASE2 (FRO2) and IRON-REGULATED TRANSPORTER1 (IRT1) in a manner that is dependent on FER-LIKE IRON DEFICIENCY TRANSCRIPTION FACTOR (FIT), indicating that MYB72 is an intrinsic part of the plant's iron-acquisition response that is typically activated upon iron starvation. However, VOC-induced MYB72 expression is activated independently of iron availability in the root vicinity. Moreover, rhizobacterial VOC-mediated induction of MYB72 requires photosynthesis-related signals, while iron deficiency in the rhizosphere activates MYB72 in the absence of shoot-derived signals. Together, these results show that the ISR- and iron acquisition-related transcription factor MYB72 in Arabidopsis roots is activated by rhizobacterial volatiles and photosynthesis-related signals, and enhances the iron-acquisition capacity of roots independently of the iron availability in the rhizosphere. This work highlights the role of MYB72 in plant processes by which root microbiota simultaneously stimulate systemic immunity and activate the iron-uptake machinery in their host plants. Significance Statement Plant roots intimately interact with plant growth-promoting rhizobacteria that prime the plant immune system and aid in iron uptake two functions facilitated by the root-specific transcription factor MYB72. Here we show how MYB72 and iron uptake responses are systemically activated by photosynthesis-related signals and volatiles produced by plant growth-promoting rhizobacteria, highlighting the important role of beneficial root microbiota in supporting plant growth and health.
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| 2. |
- Benkestock, Kurt, et al.
(författare)
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Automated Nano-Electrospray Mass Spectrometry for Protein-Ligand Screening by Noncovalent Interaction Applied to Human H-FABP and A-FABP
- 2003
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Ingår i: Journal of Biomolecular Screening. - : Elsevier BV. - 1087-0571 .- 1552-454X. ; 8:3, s. 247-256
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Tidskriftsartikel (refereegranskat)abstract
- A method for ligand screening by automated nano-electrospray ionization mass spectrometry (nano-ESI/MS) is described. The core of the system consisted of a chip-based platform for automated sample delivery from a 96-well plate and subsequent analysis based on noncovalent interactions. Human fatty acid binding protein, H-FABP (heart) and A-FABP (adipose), with small potential ligands was analyzed. The technique has been compared with a previously reported method based on nuclear magnetic resonance (NMR), and excellent correlation with the found hits was obtained. In the current MS screening method, the cycle time per sample was 1.1 min, which is approximately 50 times faster than NMR for single compounds and approximately 5 times faster for compound mixtures. High reproducibility was achieved, and the protein consumption was in the range of 88 to 100 picomoles per sample. Furthermore, a novel protocol for preparation of A-FABP without the natural ligand is presented. The described screening approach is suitable for ligand screening very early in the drug discovery process before conventional high-throughput screens (HTS) are developed and/or used as a secondary screening for ligands identified by HTS.
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| 3. |
- Zdanowicz, Christian, 1966-, et al.
(författare)
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Elemental and water-insoluble organic carbon in Svalbard snow: a synthesis of observations during 2007-2018
- 2021
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Ingår i: Atmospheric Chemistry and Physics. - : Copernicus GmbH. - 1680-7316 .- 1680-7324. ; 21:4, s. 3035-3057
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Tidskriftsartikel (refereegranskat)abstract
- Light-absorbing carbonaceous aerosols emitted by biomass or fossil fuel combustion can contribute to amplifying Arctic climate warming by lowering the albedo of snow. The Svalbard archipelago, being near to Europe and Russia, is particularly affected by these pollutants, and improved knowledge of their distribution in snow is needed to assess their impact. Here we present and synthesize new data obtained on Svalbard between 2007 and 2018, comprising measurements of elemental (EC) and water-insoluble organic carbon (WIOC) in snow from 37 separate sites. We used these data, combined with meteorological data and snowpack modeling, to investigate the variability of EC and WIOC deposition in Svalbard snow across latitude, longitude, elevation and time. Overall, EC concentrations (C-snow(EC)) ranged from < 1.0 to 266.6 ng g(-1), while WIOC concentrations (C-snow(WIOC)) ranged from < 1 to 9426 ng g(-1), with the highest values observed near Ny-Alesund. Calculated snowpack loadings (L-snow(EC), L-snow(WIOC)) on glaciers surveyed in spring 2016 were 0.1 to 2.6 mg m(-2) and 2 to 173 mg m(-2), respectively. The median C-snow(EC) and the L-snow(EC) on those glaciers were close to or lower than those found in earlier (2007- 2009), comparable surveys. Both L-snow(EC) and L(snow)(WIOC )increased with elevation and snow accumulation, with dry deposition likely playing a minor role. Estimated area-averaged snowpack loads across Svalbard were 1.1 mg EC m(-2) and 38.3 mg WIOC m(-2) for the 2015-2016 winter. An similar to 11-year long dataset of spring surface snow measurements from the central BrOgger Peninsula was used to quantify the interannual variability of EC and WIOC deposition in snow. In most years, C-snow(EC) and C-snow(WIOC) at Ny-Alesund (50 m a.s.l.) were 2-5 times higher than on the nearby Austre Brogger-breen glacier (456 m a.s.l.), and the median EC/WIOC in Ny-Alesund was 6 times higher, suggesting a possible influence of local EC emission from Ny-Alesund. While no long-term trends between 2011 and 2018 were found, C-snow(EC) and C-snow(WIOC) showed synchronous variations at Ny-Alesund and Austre Broggerbreen. When compared with data from other circum-Arctic sites obtained by comparable methods, the median C(snow)(EC)on Svalbard falls between that found in central Greenland (lowest) and those in continental sectors of European Arctic (northern Scandinavia, Russia and Siberia; highest), which is consistent with large-scale patterns of BC in snow reported by surveys based on other methods.
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