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- McMahon, Sean, et al.
(författare)
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Dubiofossils from a Mars‐analogue subsurface palaeoenvironment: The limits of biogenicity criteria
- 2021
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Ingår i: Geobiology. - : Wiley-Blackwell. - 1472-4677 .- 1472-4669. ; 19:5, s. 473-488
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Tidskriftsartikel (refereegranskat)abstract
- The search for a fossil record of Earth's deep biosphere, partly motivated by potential analogies with subsurface habitats on Mars, has uncovered numerous assemblages of inorganic microfilaments and tubules inside ancient pores and fractures. Although these enigmatic objects are morphologically similar to mineralized microorganisms (and some contain organic carbon), they also resemble some abiotic structures. Palaeobiologists have responded to this ambiguity by evaluating problematic filaments against checklists of “biogenicity criteria”. Here, we describe material that tests the limits of this approach. We sampled Jurassic calcite veins formed through subseafloor serpentinization, a water–rock reaction that can fuel the deep biosphere and is known to have occurred widely on Mars. At two localities ~4 km apart, veins contained curving, branched microfilaments composed of Mg-silicate and Fe-oxide minerals. Using a wide range of analytical techniques including synchrotron X-ray microtomography and scanning transmission electron microscopy, we show that these features meet many published criteria for biogenicity and are comparable to fossilized cryptoendolithic fungi or bacteria. However, we argue that abiotic processes driven by serpentinization could account for the same set of lifelike features, and report a chemical garden experiment that supports this view. These filaments are, therefore, most objectively described as dubiofossils, a designation we here defend from criticism and recommend over alternative approaches, but which nevertheless signifies an impasse. Similar impasses can be anticipated in the future exploration of subsurface palaeo-habitats on Earth and Mars. To avoid them, further studies are required in biomimetic geochemical self-organization, microbial taphonomy and micro-analytical techniques, with a focus on subsurface habitats.
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| 5. |
- Lukmanov, Rustam A., et al.
(författare)
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Chemical identification of microfossils from the 1.88-Ga Gunflint chert : Towards empirical biosignatures using laser ablation ionization mass spectrometer
- 2021
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Ingår i: Journal of Chemometrics. - : John Wiley & Sons. - 0886-9383 .- 1099-128X. ; 35:10
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Tidskriftsartikel (refereegranskat)abstract
- In this contribution, we investigated the chemical composition of Precambrian microfossils from the Gunflint chert (1.88 Ga) using a miniature laser ablation ionization mass spectrometer (LIMS) developed for in situ space applications. Spatially resolved mass spectrometric imaging (MSI) and depth profiling resulted in the acquisition of 68,500 mass spectra. Using single mass unit spectral decomposition and multivariate data analysis techniques, we identified the location of aggregations of microfossils and surrounding inorganic host mineral. Our results show that microfossils have unique chemical compositions that can be distinguished from the inorganic chert with high fidelity. Chemical depth profiling results also show that with LIMS microprobe data, it is possible to identify chemical differences between individual microfossils, thereby providing new insights about nature of early life. Analysis of LIMS spectra acquired from the individual microfossils reveals complex mineralization, which can reflect the metabolic diversity of the Gunflint microbiome. An intensity-based machine learning model trained on LIMS Gunflint data might be applied for the future investigations of putative microfossils from silicified matrices, where morphological integrity of investigated structures is lost, and potentially in the investigation of rocks acquired from the Martian surface.
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| 6. |
- Lukmanov, Rustam A., et al.
(författare)
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High Mass Resolution fs-LIMS Imaging and Manifold Learning Reveal Insight Into Chemical Diversity of the 1.88 Ga Gunflint Chert
- 2022
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Ingår i: Frontiers in space technologies. - : Frontiers Media S.A.. - 2673-5075. ; 3
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Tidskriftsartikel (refereegranskat)abstract
- Extraction of useful information from unstructured, large and complex mass spectrometric signals is a challenge in many application fields of mass spectrometry. Therefore, new data analysis approaches are required to help uncover the complexity of such signals. In this contribution, we examined the chemical composition of the 1.88 Ga Gunflint chert using the newly developed high mass resolution laser ionization mass spectrometer (fs-LIMS-GT). We report results on the following: 1) mass-spectrometric multi-element imaging of the Gunflint chert sample; and 2) identification of multiple chemical entities from spatial mass spectrometric data utilizing nonlinear dimensionality reduction and spectral similarity networks. The analysis of 40 ' 000 mass spectra reveals the presence of chemical heterogeneity (seven minor compounds) and two large clusters of spectra registered from the organic material and inorganic host mineral. Our results show the utility of fs-LIMS imaging in combination with manifold learning methods in studying chemically diverse samples.
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| 7. |
- Lukmanov, Rustam A., et al.
(författare)
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Multiwavelength Ablation/Ionization and Mass Spectrometric Analysis of 1.88 Ga Gunflint Chert
- 2022
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Ingår i: Astrobiology. - : Mary Ann Liebert. - 1531-1074 .- 1557-8070. ; 22:4, s. 369-386
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Tidskriftsartikel (refereegranskat)abstract
- The investigation of chemical composition on planetary bodies without significant sample processing is of importance for nearly every mission aimed at robotic exploration. Moreover, it is a necessary tool to achieve the longstanding goal of finding evidence of life beyond Earth, for example, possibly preserved microbial remains within martian sediments. Our Laser Ablation Ionization Mass Spectrometer (LIMS) is a compact time-of-flight mass spectrometer intended to investigate the elemental, isotope, and molecular composition of a wide range of solid samples, including e.g., low bulk density organic remains in microfossils. Here, we present an overview of the instrument and collected chemical spectrometric data at the micrometer level from a Precambrian chert sample (1.88 Ga Gunflint Formation, Ontario, Canada), which is considered to be a martian analogue. Data were collected from two distinct zones-a silicified host area and a carbon-bearing microfossil assemblage zone. We performed these measurements using an ultrafast pulsed laser system (pulse width of similar to 180 fs) with multiple wavelengths (infrared [IR]-775 nm, ultraviolet [UV]-387 nm, UV-258 nm) and using a pulsed high voltage on the mass spectrometer to reveal small organic signals. We investigated (1) the chemical composition of the sample and (2) the different laser wavelengths' performance to provide chemical depth profiles in silicified media. Our key findings are as follows: (1) microfossils from the Gunflint chert reveal a distinct chemical composition compared with the host mineralogy (we report the identification of 24 elements in the microfossils); (2) detection of the pristine composition of microfossils and co-occurring fine chemistry (rare earth elements) requires utilization of the depth profiling measurement protocol; and (3) our results show that, for analysis of heterogeneous material from siliciclastic deposits, siliceous sinters, and cherts, the most suitable wavelength for laser ablation/Ionization is UV-258 nm.
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| 8. |
- Lukmanov, Rustam A., et al.
(författare)
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On Topological Analysis of fs-LIMS Data. Implications for in Situ Planetary Mass Spectrometry
- 2021
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Ingår i: Frontiers in Artificial Intelligence. - : Frontiers Media S.A.. - 2624-8212. ; 4
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Tidskriftsartikel (refereegranskat)abstract
- In this contribution, we present results of non-linear dimensionality reduction and classification of the fs laser ablation ionization mass spectrometry (LIMS) imaging dataset acquired from the Precambrian Gunflint chert (1.88 Ga) using a miniature time-of-flight mass spectrometer developed for in situ space applications. We discuss the data generation, processing, and analysis pipeline for the classification of the recorded fs-LIMS mass spectra. Further, we define topological biosignatures identified for Precambrian Gunflint microfossils by projecting the recorded fs-LIMS intensity space into low dimensions. Two distinct subtypes of microfossil-related spectra, a layer of organic contamination and inorganic quartz matrix were identified using the fs-LIMS data. The topological analysis applied to the fs-LIMS data allows to gain additional knowledge from large datasets, formulate hypotheses and quickly generate insights from spectral data. Our contribution illustrates the utility of applying spatially resolved mass spectrometry in combination with topology-based analytics in detecting signatures of early (primitive) life. Our results indicate that fs-LIMS, in combination with topological methods, provides a powerful analytical framework and could be applied to the study of other complex mineralogical samples.
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| 10. |
- Wiesendanger, Reto, et al.
(författare)
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Chemical and Optical Identification of Micrometer-Sized 1.9 Billion-Year-Old Fossils by Combining a Miniature Laser Ablation Ionization Mass Spectrometry System with an Optical Microscope
- 2018
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Ingår i: Astrobiology. - : Mary Ann Liebert Inc. - 1531-1074 .- 1557-8070. ; 18:8, s. 1071-1080
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Tidskriftsartikel (refereegranskat)abstract
- The recognition of biosignatures on planetary bodies requires the analysis of the putative microfossil with a set of complementary analytical techniques. This includes localized elemental and isotopic analysis of both, the putative microfossil and its surrounding host matrix. If the analysis can be performed with spatial resolution at the micrometer level and ppm detection sensitivities, valuable information on the (bio)chemical and physical processes that influenced the sample material can be gained. Our miniaturized laser ablation ionization mass spectrometry (LIMS)-time-of-flight mass spectrometer instrument is a valid candidate for performing the required chemical analysis in situ. However, up until now it was limited by the spatial accuracy of the sampling. In this contribution, we introduce a newly developed microscope system with micrometer accuracy for Ultra High Vacuum application, which allows a significant increase in the measurement capabilities of our miniature LIMS system. The new enhancement allows identification and efficient and accurate sampling of features of micrometer-sized fossils in a host matrix. The performance of our system is demonstrated by the identification and chemical analysis of signatures of micrometer-sized fossil structures in the 1.9 billion-year-old Gunflint chert.
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