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| 2. |
- Wang, Zhaoming, et al.
(författare)
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Imputation and subset-based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on chromosome 5p15.33
- 2014
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Ingår i: Human Molecular Genetics. - : Oxford University Press (OUP). - 0964-6906 .- 1460-2083. ; 23:24, s. 6616-6633
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Tidskriftsartikel (refereegranskat)abstract
- Genome-wide association studies (GWAS) have mapped risk alleles for at least 10 distinct cancers to a small region of 63 000 bp on chromosome 5p15.33. This region harbors the TERT and CLPTM1L genes; the former encodes the catalytic subunit of telomerase reverse transcriptase and the latter may play a role in apoptosis. To investigate further the genetic architecture of common susceptibility alleles in this region, we conducted an agnostic subset-based meta-analysis (association analysis based on subsets) across six distinct cancers in 34 248 cases and 45 036 controls. Based on sequential conditional analysis, we identified as many as six independent risk loci marked by common single-nucleotide polymorphisms: five in the TERT gene (Region 1: rs7726159, P = 2.10 × 10(-39); Region 3: rs2853677, P = 3.30 × 10(-36) and PConditional = 2.36 × 10(-8); Region 4: rs2736098, P = 3.87 × 10(-12) and PConditional = 5.19 × 10(-6), Region 5: rs13172201, P = 0.041 and PConditional = 2.04 × 10(-6); and Region 6: rs10069690, P = 7.49 × 10(-15) and PConditional = 5.35 × 10(-7)) and one in the neighboring CLPTM1L gene (Region 2: rs451360; P = 1.90 × 10(-18) and PConditional = 7.06 × 10(-16)). Between three and five cancers mapped to each independent locus with both risk-enhancing and protective effects. Allele-specific effects on DNA methylation were seen for a subset of risk loci, indicating that methylation and subsequent effects on gene expression may contribute to the biology of risk variants on 5p15.33. Our results provide strong support for extensive pleiotropy across this region of 5p15.33, to an extent not previously observed in other cancer susceptibility loci.
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| 3. |
- Liu, Wei, et al.
(författare)
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Coherent dynamics of multi-spin V-B(-) center in hexagonal boron nitride
- 2022
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Ingår i: Nature Communications. - : Nature Portfolio. - 2041-1723. ; 13:1
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Tidskriftsartikel (refereegranskat)abstract
- Hexagonal boron nitride (hBN) has recently been demonstrated to contain optically polarized and detected electron spins that can be utilized for implementing qubits and quantum sensors in nanolayered-devices. Understanding the coherent dynamics ofmicrowave driven spins in hBN is of crucial importance for advancing these emerging new technologies. Here, we demonstrate and study the Rabi oscillation and related phenomena of a negatively charged boron vacancy (V-B(-)) spin ensemble in hBN. We report on different dynamics of the V-B(-) spins at weak and strong magnetic fields. In the former case the defect behaves like a single electron spin system, while in the latter case it behaves like a multi-spin system exhibiting multiple-frequency dynamical oscillation as beat in the Ramsey fringes. We also carry out theoretical simulations for the spin dynamics of V-B(-) and reveal that the nuclear spins can be driven via the strong electron nuclear coupling existing in V-B(-) center, which can be modulated by the magnetic field and microwave field.
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| 4. |
- Hillier, Ladeana W, et al.
(författare)
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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
- 2004
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Ingår i: Nature. - 0028-0836 .- 1476-4687. ; 432:7018, s. 695-716
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Tidskriftsartikel (refereegranskat)abstract
- We present here a draft genome sequence of the red jungle fowl, Gallus gallus. Because the chicken is a modern descendant of the dinosaurs and the first non-mammalian amniote to have its genome sequenced, the draft sequence of its genome--composed of approximately one billion base pairs of sequence and an estimated 20,000-23,000 genes--provides a new perspective on vertebrate genome evolution, while also improving the annotation of mammalian genomes. For example, the evolutionary distance between chicken and human provides high specificity in detecting functional elements, both non-coding and coding. Notably, many conserved non-coding sequences are far from genes and cannot be assigned to defined functional classes. In coding regions the evolutionary dynamics of protein domains and orthologous groups illustrate processes that distinguish the lineages leading to birds and mammals. The distinctive properties of avian microchromosomes, together with the inferred patterns of conserved synteny, provide additional insights into vertebrate chromosome architecture.
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| 5. |
- Machiela, Mitchell J., et al.
(författare)
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Characterization of Large Structural Genetic Mosaicism in Human Autosomes
- 2015
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Ingår i: American Journal of Human Genetics. - : Elsevier BV. - 0002-9297 .- 1537-6605. ; 96:3, s. 487-497
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Tidskriftsartikel (refereegranskat)abstract
- Analyses of genome-wide association study (GWAS) data have revealed that detectable genetic mosaicism involving large (>2 Mb) structural autosomal alterations occurs in a fraction of individuals. We present results for a set of 24,849 genotyped individuals (total GWAS set II [TGSII]) in whom 341 large autosomal abnormalities were observed in 168 (0.68%) individuals. Merging data from the new TGSII set with data from two prior reports (the Gene-Environment Association Studies and the total GWAS set I) generated a large dataset of 127,179 individuals; we then conducted a meta-analysis to investigate the patterns of detectable autosomal mosaicism (n = 1,315 events in 925 [0.73%] individuals). Restricting to events >2 Mb in size, we observed an increase in event frequency as event size decreased. The combined results underscore that the rate of detectable mosaicism increases with age (p value = 5.5 x 3 10(-31)) and is higher in men (p value = 0.002) but lower in participants of African ancestry (p value = 0.003). In a subset of 47 individuals from whom serial samples were collected up to 6 years apart, complex changes were noted over time and showed an overall increase in the proportion of mosaic cells as age increased. Our large combined sample allowed for a unique ability to characterize detectable genetic mosaicism involving large structural events and strengthens the emerging evidence of non-random erosion of the genome in the aging population.
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| 6. |
- Machiela, Mitchell J, et al.
(författare)
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Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome
- 2016
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Ingår i: Nature Communications. - : Nature Publishing Group. - 2041-1723. ; 7
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Tidskriftsartikel (refereegranskat)abstract
- To investigate large structural clonal mosaicism of chromosome X, we analysed the SNP microarray intensity data of 38,303 women from cancer genome-wide association studies (20,878 cases and 17,425 controls) and detected 124 mosaic X events >2 Mb in 97 (0.25%) women. Here we show rates for X-chromosome mosaicism are four times higher than mean autosomal rates; X mosaic events more often include the entire chromosome and participants with X events more likely harbour autosomal mosaic events. X mosaicism frequency increases with age (0.11% in 50-year olds; 0.45% in 75-year olds), as reported for Y and autosomes. Methylation array analyses of 33 women with X mosaicism indicate events preferentially involve the inactive X chromosome. Our results provide further evidence that the sex chromosomes undergo mosaic events more frequently than autosomes, which could have implications for understanding the underlying mechanisms of mosaic events and their possible contribution to risk for chronic diseases.
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| 7. |
- Song, Xinkai, et al.
(författare)
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Improving energy transfer efficiency of dye-sensitized solar cell by fine tuning of dye planarity
- 2019
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Ingår i: Solar Energy. - : Elsevier. - 0038-092X .- 1471-1257. ; 187, s. 274-280
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Tidskriftsartikel (refereegranskat)abstract
- Two push-pull metal-free sensitizers with 5,11-dihydroindolo[3,2-b]carbazole derivatives as electron-donating groups and 4-(benzo[c][1,2,5]thiadiazol-4-ylethynyl)benzoic acid (BTZ) as electron-withdrawing unit, denoted by SK201 and SK202, were synthesized and used for fabrication of dye-sensitized solar cells (DSSCs). SK202 contains a thienyl group between the donor and acceptor, whereas in SK201 the donor and acceptor are connected directly by a single bond. Introduction of a thienyl group improved the planarity of the dye molecule, broadened the absorption spectrum, enhanced the molar extinction coefficient, increased the dye loading on TiO2, and accelerated interface electron transfer on TiO2. This fine tuning of dye structure improved the performances of DSSCs based on SK202 sensitizers and gave a power conversion efficiency (PCE) of 11.0% (J(SC) 16.5 mA cm(-2), V-OC 932 mV, and fill factor 71.7%), compared with that of 7.2% for SK201, under standard AM1.5G solar irradiation (100 mW cm(-2)) with a Co(II/III) complex based redox couple.
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| 8. |
- Wang, Weihan, et al.
(författare)
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Enhancing the Energy-Conversion Efficiency of Solid-State Dye-Sensitized Solar Cells with a Charge-Transfer Complex based on 2,3-Dichloro-5,6-dicyano-1,4-benzoquinone
- 2018
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Ingår i: ENERGY TECHNOLOGY. - : John Wiley & Sons. - 2194-4288. ; 6:4, s. 752-758
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Tidskriftsartikel (refereegranskat)abstract
- As a champion hole-transporting material (HTM), 2,27,7-tetrakis-(N,N-di-p-methoxyphenylamine)-9,9-spirobifluorene (Spiro-OMeTAD) has been widely used in solid-state dye-sensitized solar cells (ssDSCs). Owing to the low conductivity of Spiro-OMeTAD, a chemical doping strategy is commonly used to enhance its hole-transporting properties. In this study, we report a strong electron acceptor, 2,3-dichloro-5,6-dicyano-1,4-benzoquinone (DDQ) as an additive for Spiro-OMeTAD along with its application in ssDSCs. We show that the conductivity of Spiro-OMeTAD increases from 5.31 x 10(-5) to 2.22 x 10(-4) Scm upon the addition of 0.04% DDQ, and the power conversion efficiency (PCE) of the ssDSCs also increases. By utilizing a donor-pi-acceptor sensitizer with a high coefficient and an HTM with an optimized doping ratio, we were able to achieve a high PCE of 6.37% for the ssDSCs under 10 0mWcm(-2) AM1.5G simulated illumination, in comparison to the PCE of the pristine device, which was only 3.50%. An increase in the application of benzoquinone-based materials for organic electronics is expected, especially for solar-cell applications.
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| 9. |
- Yu, Ze, et al.
(författare)
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Diiron dithiolate complexes containing intra-ligand NH center dot center dot center dot S hydrogen bonds : FeFe hydrogenase active site models for the electrochemical proton reduction of HOAc with low overpotential
- 2008
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Ingår i: Dalton Transactions. - : Royal Society of Chemistry (RSC). - 1477-9226 .- 1477-9234. ; :18, s. 2400-2406
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Tidskriftsartikel (refereegranskat)abstract
- Four diiron dithiolate complexes containing ortho- acylamino- functionalized arenethiolato ligands, [(mu-S-2-RCONHC6H4)(2)Fe-2(CO)(6)] (R=CH3, 1; CF3, 2; C6H5, 3; 4-FC6H4, 4), were synthesized and well characterized as biomimetic models of the Fe-Fe hydrogenase active site. The molecular structures of 3 and 4 were determined by X-ray crystallography. The intra-ligand NH center dot center dot center dot S hydrogen bonds were studied by the X-ray analysis and by the H-1 NMR spectroscopy. The contribution of the NH center dot center dot center dot S hydrogen bonds to the reduction potentials of complexes 1-4 was investigated by electrochemistry. The first reduction potentials of complexes 1-4 exhibit large positive shifts, that is, 220-320 mV in comparison to that of the analogous complex [(mu- SPh)(2)Fe-2(CO)(6)] and 370-470 mV to that of [(mu- pdt)(2)Fe-2(CO)(6)] (pdt = propane-1,3-dithiolato). Complex 4 is capable of electrocatalysing proton reduction of acetic acid at relatively low overpotential ( ca. 0.2 V) in acetonitrile.
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| 10. |
- Zhang, Li, et al.
(författare)
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13.6% Efficient Organic Dye-Sensitized Solar Cells by Minimizing Energy Losses of the Excited State
- 2019
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Ingår i: ACS Energy Letters. - : AMER CHEMICAL SOC. - 2380-8195. ; 4:4, s. 943-951
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Tidskriftsartikel (refereegranskat)abstract
- The electron-injection energy losses of dye-sensitized solar cells (DSSCs) are among the fundamental problems hindering their successful breakthrough application. Two triazatruxene (TAT)-based sensitizers, with one containing a flexible Z-type double bond and another a rigid single bond, coded as ZL001 and ZL003, respectively, have been synthesized and applied in DSSCs to probe the energy losses in the process of electron injection. Using time-resolved laser spectroscopic techniques in the kinetic study, ZL003 with the rigid single bond promotes much faster electron injection into the conductive band of TiO2 especially in the locally excited state (hot injection), which leads to higher electron density in TiO2 and a higher V-oc. The devices based on ZL003 exhibited a champion power conversion efficiency (PCE) of 13.6% with V-oc = 956 mV, J(sc) = 20.73 mA cm(-2), and FF = 68.5%, which are among the highest recorded results to date on single dye-sensitized DSSCs. An independent certified PCE of 12.4% has been obtained for devices based on ZL003.
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